RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 ZFYVE28Q9HCC9 887 aa18.16■□□□□ 0.5
UBE3B-212ENST00000540230 ZBTB21Q9ULJ3 1066 aa18.16■□□□□ 0.5
UBE3B-212ENST00000540230 CYP2D7A0A087X1C5 515 aa18.15■□□□□ 0.5
UBE3B-212ENST00000540230 USP17L5A8MUK1 530 aa18.15■□□□□ 0.5
UBE3B-212ENST00000540230 M0R2C6 588 aa18.15■□□□□ 0.5
UBE3B-212ENST00000540230 SHMT1P34896 483 aa18.15■□□□□ 0.5
UBE3B-212ENST00000540230 GADL1Q6ZQY3 521 aa18.15■□□□□ 0.5
UBE3B-212ENST00000540230 CD99L2Q8TCZ2 262 aa18.15■□□□□ 0.5
UBE3B-212ENST00000540230 SEC62Q99442 399 aaKnown RBP18.15■□□□□ 0.5
UBE3B-212ENST00000540230 ZCCHC17Q9NP64 241 aaKnown RBP18.15■□□□□ 0.5
UBE3B-212ENST00000540230 SLC4A4Q9Y6R1 1079 aa18.15■□□□□ 0.5
UBE3B-212ENST00000540230 TLR2O60603 784 aa18.14■□□□□ 0.49
UBE3B-212ENST00000540230 ASNSP08243 561 aa18.14■□□□□ 0.49
UBE3B-212ENST00000540230 NUCB1Q02818 461 aa18.14■□□□□ 0.49
UBE3B-212ENST00000540230 CHD1LQ86WJ1 897 aa18.14■□□□□ 0.49
UBE3B-212ENST00000540230 SLC44A5Q8NCS7 719 aa18.14■□□□□ 0.49
UBE3B-212ENST00000540230 ZNF280CQ8ND82 737 aa18.14■□□□□ 0.49
UBE3B-212ENST00000540230 STRBPQ96SI9 672 aaKnown RBP18.14■□□□□ 0.49
UBE3B-212ENST00000540230 FSD1Q9BTV5 496 aa18.14■□□□□ 0.49
UBE3B-212ENST00000540230 ATP8A2Q9NTI2 1148 aa18.14■□□□□ 0.49
UBE3B-212ENST00000540230 ADGRA2Q96PE1 1338 aa18.14■□□□□ 0.49
UBE3B-212ENST00000540230 GH2P01242 217 aa18.13■□□□□ 0.49
UBE3B-212ENST00000540230 CYP2C8P10632 490 aa18.13■□□□□ 0.49
UBE3B-212ENST00000540230 SP3Q02447 781 aa18.13■□□□□ 0.49
UBE3B-212ENST00000540230 TREML2Q5T2D2 321 aa18.13■□□□□ 0.49
UBE3B-212ENST00000540230 DYNLL2Q96FJ2 89 aa18.13■□□□□ 0.49
UBE3B-212ENST00000540230 GPAA1O43292 621 aa18.13■□□□□ 0.49
UBE3B-212ENST00000540230 ZFYP08048 801 aaPredicted RBP18.13■□□□□ 0.49
UBE3B-212ENST00000540230 HMGCS2P54868 508 aa18.13■□□□□ 0.49
UBE3B-212ENST00000540230 FASTKD5Q7L8L6 764 aaKnown RBP18.13■□□□□ 0.49
UBE3B-212ENST00000540230 CPA4Q9UI42 421 aa18.13■□□□□ 0.49
UBE3B-212ENST00000540230 MYH8P13535 1937 aa18.12■□□□□ 0.49
UBE3B-212ENST00000540230 GSG1L2A8MUP6 293 aa18.12■□□□□ 0.49
UBE3B-212ENST00000540230 USP17L12C9JPN9 530 aa18.12■□□□□ 0.49
UBE3B-212ENST00000540230 USP17L21D6R901 530 aa18.12■□□□□ 0.49
UBE3B-212ENST00000540230 MTMR2Q13614 643 aa18.12■□□□□ 0.49
UBE3B-212ENST00000540230 CERKLQ49MI3 558 aaPredicted RBP18.12■□□□□ 0.49
UBE3B-212ENST00000540230 WDR18Q9BV38 432 aa18.12■□□□□ 0.49
UBE3B-212ENST00000540230 EPB41L4AQ9HCS5 686 aaPredicted RBP18.12■□□□□ 0.49
UBE3B-212ENST00000540230 GUCY1A2P33402 732 aa18.11■□□□□ 0.49
UBE3B-212ENST00000540230 C12orf60Q5U649 245 aa18.11■□□□□ 0.49
UBE3B-212ENST00000540230 CTR9Q6PD62 1173 aa18.11■□□□□ 0.49
UBE3B-212ENST00000540230 C17orf99Q6UX52 265 aa18.11■□□□□ 0.49
UBE3B-212ENST00000540230 OTOP1Q7RTM1 612 aa18.11■□□□□ 0.49
UBE3B-212ENST00000540230 PLEKHM2Q8IWE5 1019 aa18.11■□□□□ 0.49
UBE3B-212ENST00000540230 TBC1D2Q9BYX2 928 aa18.11■□□□□ 0.49
UBE3B-212ENST00000540230 ARHGAP39Q9C0H5 1083 aa18.11■□□□□ 0.49
UBE3B-212ENST00000540230 AS3MTQ9HBK9 375 aa18.11■□□□□ 0.49
UBE3B-212ENST00000540230 AGTPBP1Q9UPW5 1226 aa18.11■□□□□ 0.49
UBE3B-212ENST00000540230 TRIM17Q9Y577 477 aa18.11■□□□□ 0.49
UBE3B-212ENST00000540230 ECM2O94769 699 aaPredicted RBP18.1■□□□□ 0.49
UBE3B-212ENST00000540230 ABCB5Q2M3G0 1257 aa18.1■□□□□ 0.49
UBE3B-212ENST00000540230 SH3D19Q5HYK7 790 aa18.1■□□□□ 0.49
UBE3B-212ENST00000540230 ZMYM1Q5SVZ6 1142 aa18.1■□□□□ 0.49
UBE3B-212ENST00000540230 ERO1AQ96HE7 468 aa18.1■□□□□ 0.49
UBE3B-212ENST00000540230 GINM1Q9NU53 330 aa18.1■□□□□ 0.49
UBE3B-212ENST00000540230 BACE1P56817 501 aa18.09■□□□□ 0.49
UBE3B-212ENST00000540230 PROCA1Q8NCQ7 364 aaPredicted RBP18.09■□□□□ 0.49
UBE3B-212ENST00000540230 EVI5LQ96CN4 794 aa18.09■□□□□ 0.49
UBE3B-212ENST00000540230 PARK7Q99497 189 aaKnown RBP18.09■□□□□ 0.49
UBE3B-212ENST00000540230 BRCA2P51587 3418 aa18.09■□□□□ 0.49
UBE3B-212ENST00000540230 CTGFP29279 349 aa18.08■□□□□ 0.49
UBE3B-212ENST00000540230 RAB3GAP1Q15042 981 aa18.08■□□□□ 0.49
UBE3B-212ENST00000540230 CCDC129Q6ZRS4 1044 aa18.08■□□□□ 0.49
UBE3B-212ENST00000540230 SLC45A1Q9Y2W3 748 aa18.08■□□□□ 0.49
UBE3B-212ENST00000540230 CCDC85CA6NKD9 419 aa18.08■□□□□ 0.48
UBE3B-212ENST00000540230 BCRP11274 1271 aa18.08■□□□□ 0.48
UBE3B-212ENST00000540230 PDE4AP27815 886 aa18.08■□□□□ 0.48
UBE3B-212ENST00000540230 SEPT2Q15019 361 aa18.08■□□□□ 0.48
UBE3B-212ENST00000540230 LRRFIP1Q32MZ4 808 aaKnown RBP18.08■□□□□ 0.48
UBE3B-212ENST00000540230 ACER1Q8TDN7 264 aa18.08■□□□□ 0.48
UBE3B-212ENST00000540230 OSBPL3Q9H4L5 887 aa18.08■□□□□ 0.48
UBE3B-212ENST00000540230 HPS5Q9UPZ3 1129 aa18.08■□□□□ 0.48
UBE3B-212ENST00000540230 USP17L10C9JJH3 530 aa18.07■□□□□ 0.48
UBE3B-212ENST00000540230 FOXP2O15409 715 aa18.07■□□□□ 0.48
UBE3B-212ENST00000540230 AKR1B1P15121 316 aa18.07■□□□□ 0.48
UBE3B-212ENST00000540230 CDK8P49336 464 aa18.07■□□□□ 0.48
UBE3B-212ENST00000540230 LACTBP83111 547 aaPredicted RBP18.07■□□□□ 0.48
UBE3B-212ENST00000540230 ZYXQ15942 572 aaKnown RBP18.07■□□□□ 0.48
UBE3B-212ENST00000540230 FBXO46Q6PJ61 603 aaPredicted RBP18.07■□□□□ 0.48
UBE3B-212ENST00000540230 C16orf86Q6ZW13 317 aa18.07■□□□□ 0.48
UBE3B-212ENST00000540230 CLEC10AQ8IUN9 316 aa18.07■□□□□ 0.48
UBE3B-212ENST00000540230 DDRGK1Q96HY6 314 aa18.07■□□□□ 0.48
UBE3B-212ENST00000540230 EFCC1Q9HA90 598 aa18.07■□□□□ 0.48
UBE3B-212ENST00000540230 EMILIN3Q9NT22 766 aa18.07■□□□□ 0.48
UBE3B-212ENST00000540230 ARPP21Q9UBL0 812 aaPredicted RBP18.07■□□□□ 0.48
UBE3B-212ENST00000540230 SWAP70Q9UH65 585 aa18.07■□□□□ 0.48
UBE3B-212ENST00000540230 MPHOSPH10O00566 681 aaKnown RBP18.06■□□□□ 0.48
UBE3B-212ENST00000540230 PKN2Q16513 984 aaKnown RBP18.06■□□□□ 0.48
UBE3B-212ENST00000540230 SBK1Q52WX2 424 aa18.06■□□□□ 0.48
UBE3B-212ENST00000540230 STK11IPQ8N1F8 1099 aa18.06■□□□□ 0.48
UBE3B-212ENST00000540230 FAM227BQ96M60 508 aa18.06■□□□□ 0.48
UBE3B-212ENST00000540230 CABP5Q9NP86 173 aa18.06■□□□□ 0.48
UBE3B-212ENST00000540230 A0A0D9SFI3 127 aa18.05■□□□□ 0.48
UBE3B-212ENST00000540230 TRIM6-TRIM34B2RNG4 842 aa18.05■□□□□ 0.48
UBE3B-212ENST00000540230 GIMAP6Q6P9H5 292 aa18.05■□□□□ 0.48
UBE3B-212ENST00000540230 AMOTL1Q8IY63 956 aa18.05■□□□□ 0.48
UBE3B-212ENST00000540230 IFNL3Q8IZI9 196 aa18.05■□□□□ 0.48
UBE3B-212ENST00000540230 RILPL2Q969X0 211 aa18.05■□□□□ 0.48
UBE3B-212ENST00000540230 ASCC2Q9H1I8 757 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms