RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 USP17L12C9JPN9 530 aa21.99■■□□□ 1.11
SNRPA1-203ENST00000540017 USP17L21D6R901 530 aa21.99■■□□□ 1.11
SNRPA1-203ENST00000540017 LRRFIP1Q32MZ4 808 aaKnown RBP21.99■■□□□ 1.11
SNRPA1-203ENST00000540017 DYNLL2Q96FJ2 89 aa21.99■■□□□ 1.11
SNRPA1-203ENST00000540017 PTPRFP10586 1907 aa21.99■■□□□ 1.11
SNRPA1-203ENST00000540017 USP17L5A8MUK1 530 aa21.98■■□□□ 1.11
SNRPA1-203ENST00000540017 ASNSP08243 561 aa21.98■■□□□ 1.11
SNRPA1-203ENST00000540017 SPP2Q13103 211 aa21.98■■□□□ 1.11
SNRPA1-203ENST00000540017 TAF1CQ15572 869 aaPredicted RBP21.98■■□□□ 1.11
SNRPA1-203ENST00000540017 NOM1Q5C9Z4 860 aaKnown RBP21.98■■□□□ 1.11
SNRPA1-203ENST00000540017 C12orf60Q5U649 245 aa21.98■■□□□ 1.11
SNRPA1-203ENST00000540017 CTR9Q6PD62 1173 aa21.98■■□□□ 1.11
SNRPA1-203ENST00000540017 ANKRD23Q86SG2 305 aa21.98■■□□□ 1.11
SNRPA1-203ENST00000540017 SLC44A5Q8NCS7 719 aa21.98■■□□□ 1.11
SNRPA1-203ENST00000540017 ZBTB21Q9ULJ3 1066 aa21.98■■□□□ 1.11
SNRPA1-203ENST00000540017 GH2P01242 217 aa21.97■■□□□ 1.11
SNRPA1-203ENST00000540017 DGKZQ13574 1117 aa21.97■■□□□ 1.11
SNRPA1-203ENST00000540017 ZNF280CQ8ND82 737 aa21.97■■□□□ 1.11
SNRPA1-203ENST00000540017 EPB41L4AQ9HCS5 686 aaPredicted RBP21.97■■□□□ 1.11
SNRPA1-203ENST00000540017 TRIM6-TRIM34B2RNG4 842 aa21.96■■□□□ 1.11
SNRPA1-203ENST00000540017 PDHXO00330 501 aa21.96■■□□□ 1.11
SNRPA1-203ENST00000540017 CERKLQ49MI3 558 aaPredicted RBP21.96■■□□□ 1.11
SNRPA1-203ENST00000540017 GADL1Q6ZQY3 521 aa21.96■■□□□ 1.11
SNRPA1-203ENST00000540017 CCDC129Q6ZRS4 1044 aa21.96■■□□□ 1.11
SNRPA1-203ENST00000540017 ZCCHC17Q9NP64 241 aaKnown RBP21.96■■□□□ 1.11
SNRPA1-203ENST00000540017 FKTNO75072 461 aa21.95■■□□□ 1.1
SNRPA1-203ENST00000540017 RILPL2Q969X0 211 aa21.95■■□□□ 1.1
SNRPA1-203ENST00000540017 FAM227BQ96M60 508 aa21.95■■□□□ 1.1
SNRPA1-203ENST00000540017 WDR18Q9BV38 432 aa21.95■■□□□ 1.1
SNRPA1-203ENST00000540017 ZFYVE28Q9HCC9 887 aa21.95■■□□□ 1.1
SNRPA1-203ENST00000540017 GINM1Q9NU53 330 aa21.95■■□□□ 1.1
SNRPA1-203ENST00000540017 FOXP2O15409 715 aa21.94■■□□□ 1.1
SNRPA1-203ENST00000540017 GUCY1A2P33402 732 aa21.94■■□□□ 1.1
SNRPA1-203ENST00000540017 ABCB5Q2M3G0 1257 aa21.94■■□□□ 1.1
SNRPA1-203ENST00000540017 GIMAP6Q6P9H5 292 aa21.94■■□□□ 1.1
SNRPA1-203ENST00000540017 FASTKD5Q7L8L6 764 aaKnown RBP21.94■■□□□ 1.1
SNRPA1-203ENST00000540017 DDRGK1Q96HY6 314 aa21.94■■□□□ 1.1
SNRPA1-203ENST00000540017 TBC1D2Q9BYX2 928 aa21.94■■□□□ 1.1
SNRPA1-203ENST00000540017 A0A0D9SFI3 127 aa21.93■■□□□ 1.1
SNRPA1-203ENST00000540017 PATL2C9JE40 543 aaKnown RBP21.93■■□□□ 1.1
SNRPA1-203ENST00000540017 GNAT2P19087 354 aa21.93■■□□□ 1.1
SNRPA1-203ENST00000540017 HMGCS2P54868 508 aa21.93■■□□□ 1.1
SNRPA1-203ENST00000540017 CAP1Q01518 475 aa21.93■■□□□ 1.1
SNRPA1-203ENST00000540017 SBK1Q52WX2 424 aa21.93■■□□□ 1.1
SNRPA1-203ENST00000540017 TREML2Q5T2D2 321 aa21.93■■□□□ 1.1
SNRPA1-203ENST00000540017 AS3MTQ9HBK9 375 aa21.93■■□□□ 1.1
SNRPA1-203ENST00000540017 ADGRA2Q96PE1 1338 aa21.92■■□□□ 1.1
SNRPA1-203ENST00000540017 TLR2O60603 784 aa21.92■■□□□ 1.1
SNRPA1-203ENST00000540017 APPP05067 770 aa21.92■■□□□ 1.1
SNRPA1-203ENST00000540017 CDK8P49336 464 aa21.92■■□□□ 1.1
SNRPA1-203ENST00000540017 MTMR2Q13614 643 aa21.92■■□□□ 1.1
SNRPA1-203ENST00000540017 SH3D19Q5HYK7 790 aa21.92■■□□□ 1.1
SNRPA1-203ENST00000540017 C16orf86Q6ZW13 317 aa21.92■■□□□ 1.1
SNRPA1-203ENST00000540017 MCOLN1Q9GZU1 580 aa21.92■■□□□ 1.1
SNRPA1-203ENST00000540017 ARPP21Q9UBL0 812 aaPredicted RBP21.92■■□□□ 1.1
SNRPA1-203ENST00000540017 SWAP70Q9UH65 585 aa21.92■■□□□ 1.1
SNRPA1-203ENST00000540017 CYP2C8P10632 490 aa21.91■■□□□ 1.1
SNRPA1-203ENST00000540017 BACE1P56817 501 aa21.91■■□□□ 1.1
SNRPA1-203ENST00000540017 NMIQ13287 307 aaPredicted RBP21.91■■□□□ 1.1
SNRPA1-203ENST00000540017 SEPT2Q15019 361 aa21.91■■□□□ 1.1
SNRPA1-203ENST00000540017 RAB3GAP1Q15042 981 aa21.91■■□□□ 1.1
SNRPA1-203ENST00000540017 AMOTL1Q8IY63 956 aa21.91■■□□□ 1.1
SNRPA1-203ENST00000540017 IFNL3Q8IZI9 196 aa21.91■■□□□ 1.1
SNRPA1-203ENST00000540017 HELLSQ9NRZ9 838 aa21.91■■□□□ 1.1
SNRPA1-203ENST00000540017 AGTPBP1Q9UPW5 1226 aa21.91■■□□□ 1.1
SNRPA1-203ENST00000540017 LOC285556D6RIA3 1793 aa21.91■■□□□ 1.1
SNRPA1-203ENST00000540017 GSPT1P15170 499 aaKnown RBP21.9■■□□□ 1.1
SNRPA1-203ENST00000540017 SDSP20132 328 aa21.9■■□□□ 1.1
SNRPA1-203ENST00000540017 TDO2P48775 406 aa21.9■■□□□ 1.1
SNRPA1-203ENST00000540017 SP3Q02447 781 aa21.9■■□□□ 1.1
SNRPA1-203ENST00000540017 VPS53Q5VIR6 699 aa21.9■■□□□ 1.1
SNRPA1-203ENST00000540017 CTU1Q7Z7A3 348 aaKnown RBP21.9■■□□□ 1.1
SNRPA1-203ENST00000540017 STK11IPQ8N1F8 1099 aa21.9■■□□□ 1.1
SNRPA1-203ENST00000540017 PROCA1Q8NCQ7 364 aaPredicted RBP21.9■■□□□ 1.1
SNRPA1-203ENST00000540017 ACER1Q8TDN7 264 aa21.9■■□□□ 1.1
SNRPA1-203ENST00000540017 CABP5Q9NP86 173 aa21.9■■□□□ 1.1
SNRPA1-203ENST00000540017 CPA4Q9UI42 421 aa21.9■■□□□ 1.1
SNRPA1-203ENST00000540017 MINDY4BA8MYZ0 360 aa21.89■■□□□ 1.09
SNRPA1-203ENST00000540017 USP17L10C9JJH3 530 aa21.89■■□□□ 1.09
SNRPA1-203ENST00000540017 MPHOSPH10O00566 681 aaKnown RBP21.89■■□□□ 1.09
SNRPA1-203ENST00000540017 AKR1B1P15121 316 aa21.89■■□□□ 1.09
SNRPA1-203ENST00000540017 TTC22Q5TAA0 569 aa21.89■■□□□ 1.09
SNRPA1-203ENST00000540017 C17orf99Q6UX52 265 aa21.89■■□□□ 1.09
SNRPA1-203ENST00000540017 ZNF589Q86UQ0 364 aaPredicted RBP21.89■■□□□ 1.09
SNRPA1-203ENST00000540017 TICAM2Q86XR7 235 aa21.89■■□□□ 1.09
SNRPA1-203ENST00000540017 CD99L2Q8TCZ2 262 aa21.89■■□□□ 1.09
SNRPA1-203ENST00000540017 TAOK2Q9UL54 1235 aa21.89■■□□□ 1.09
SNRPA1-203ENST00000540017 SLC45A1Q9Y2W3 748 aa21.89■■□□□ 1.09
SNRPA1-203ENST00000540017 MCMDC2Q4G0Z9 681 aa21.88■■□□□ 1.09
SNRPA1-203ENST00000540017 CLEC10AQ8IUN9 316 aa21.88■■□□□ 1.09
SNRPA1-203ENST00000540017 EMILIN3Q9NT22 766 aa21.88■■□□□ 1.09
SNRPA1-203ENST00000540017 MYH8P13535 1937 aa21.88■■□□□ 1.09
SNRPA1-203ENST00000540017 ROBO3Q96MS0 1386 aa21.87■■□□□ 1.09
SNRPA1-203ENST00000540017 C19orf81C9J6K1 198 aa21.87■■□□□ 1.09
SNRPA1-203ENST00000540017 PARK7Q99497 189 aaKnown RBP21.87■■□□□ 1.09
SNRPA1-203ENST00000540017 A0A1W2PRG0 241 aa21.86■■□□□ 1.09
SNRPA1-203ENST00000540017 ZYXQ15942 572 aaKnown RBP21.86■■□□□ 1.09
SNRPA1-203ENST00000540017 TMEM179Q6ZVK1 233 aa21.86■■□□□ 1.09
SNRPA1-203ENST00000540017 SKAP1Q86WV1 359 aa21.86■■□□□ 1.09
SNRPA1-203ENST00000540017 SIAH1Q8IUQ4 282 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms