RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 IFIT1BQ5T764 474 aaKnown RBP12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 SAMD7Q7Z3H4 446 aa12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 TTC6Q86TZ1 520 aa12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 SGMS1Q86VZ5 419 aa12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 CMTR1Q8N1G2 835 aaKnown RBP12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 IDI2Q9BXS1 227 aa12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 MYOZ2Q9NPC6 264 aa12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 ZNF70Q9UC06 446 aaPredicted RBP12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 FER1L6Q2WGJ9 1857 aa12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 LMNB1P20700 586 aa12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 NUCB2P80303 420 aa12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 TBC1D10BQ4KMP7 808 aaPredicted RBP12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 CDAN1Q8IWY9 1227 aa12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 MICALL2Q8IY33 904 aa12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 CCDC82Q8N4S0 544 aa12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 FAM217BQ9NTX9 383 aaPredicted RBP12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 SERPINB13Q9UIV8 391 aa12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 MTMR7Q9Y216 660 aa12.12□□□□□ -0.47
PABPC1P4-201ENST00000539977 ASTN2O75129 1339 aaPredicted RBP12.11□□□□□ -0.47
PABPC1P4-201ENST00000539977 VPS37CA5D8V6 355 aaPredicted RBP12.11□□□□□ -0.47
PABPC1P4-201ENST00000539977 GOLGA8AA7E2F4 631 aa12.11□□□□□ -0.47
PABPC1P4-201ENST00000539977 WNT10BO00744 389 aa12.11□□□□□ -0.47
PABPC1P4-201ENST00000539977 CPLX1O14810 134 aa12.11□□□□□ -0.47
PABPC1P4-201ENST00000539977 GABPAQ06546 454 aa12.11□□□□□ -0.47
PABPC1P4-201ENST00000539977 LARP1BQ659C4 914 aaKnown RBP12.11□□□□□ -0.47
PABPC1P4-201ENST00000539977 SYNE3Q6ZMZ3 975 aa12.11□□□□□ -0.47
PABPC1P4-201ENST00000539977 ZNF654Q8IZM8 581 aa12.11□□□□□ -0.47
PABPC1P4-201ENST00000539977 CNOT7Q9UIV1 285 aaKnown RBP12.11□□□□□ -0.47
PABPC1P4-201ENST00000539977 ZNF646O15015 1829 aaPredicted RBP12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 UBE2Q2LH0YL09 131 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 STX6O43752 255 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 BRD1O95696 1058 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 HLA-DOAP06340 250 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 SHROOM1Q2M3G4 852 aaPredicted RBP12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 RCSD1Q6JBY9 416 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 CLEC10AQ8IUN9 316 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 CRACR2BQ8N4Y2 399 aaPredicted RBP12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 PHKBQ93100 1093 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 DNAJC18Q9H819 358 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 TMOD2Q9NZR1 351 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 RNF181Q9P0P0 153 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 STX8Q9UNK0 236 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 FDPSP14324 419 aaKnown RBP12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 AKR1B1P15121 316 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 SHMT1P34896 483 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 SPDYE2Q495Y8 402 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 TMTC2Q8N394 836 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 FAM184AQ8NB25 1140 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 SMARCC2Q8TAQ2 1214 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 TMEM39BQ9GZU3 492 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 ZNF287Q9HBT7 754 aa12.1□□□□□ -0.47
PABPC1P4-201ENST00000539977 MPHOSPH10O00566 681 aaKnown RBP12.09□□□□□ -0.47
PABPC1P4-201ENST00000539977 DHX16O60231 1041 aaKnown RBP12.09□□□□□ -0.47
PABPC1P4-201ENST00000539977 CATIPQ7Z7H3 387 aa12.09□□□□□ -0.47
PABPC1P4-201ENST00000539977 FERMT3Q86UX7 667 aa12.09□□□□□ -0.47
PABPC1P4-201ENST00000539977 FANCBQ8NB91 859 aa12.09□□□□□ -0.47
PABPC1P4-201ENST00000539977 CSRNP1Q96S65 589 aa12.09□□□□□ -0.47
PABPC1P4-201ENST00000539977 LLPHQ9BRT6 129 aaKnown RBP12.09□□□□□ -0.47
PABPC1P4-201ENST00000539977 MTA3Q9BTC8 594 aa12.09□□□□□ -0.47
PABPC1P4-201ENST00000539977 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.09□□□□□ -0.47
PABPC1P4-201ENST00000539977 GJB4Q9NTQ9 266 aa12.09□□□□□ -0.47
PABPC1P4-201ENST00000539977 PI4KBQ9UBF8 816 aa12.09□□□□□ -0.47
PABPC1P4-201ENST00000539977 MTMR6Q9Y217 621 aa12.09□□□□□ -0.47
PABPC1P4-201ENST00000539977 DDNO94850 711 aaPredicted RBP12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 ZSCAN22P10073 491 aaPredicted RBP12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 RPS12P25398 132 aaKnown RBP12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 ZNF280AP59817 542 aaPredicted RBP12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 GUCY1B3Q02153 619 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 TROAPQ12815 778 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 GPR162Q16538 588 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 RTN1Q16799 776 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 OTUD7BQ6GQQ9 843 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 CDC37L1Q7L3B6 337 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 RASGRP2Q7LDG7 609 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 MTMR14Q8NCE2 650 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 CEP95Q96GE4 821 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 ZBED3Q96IU2 234 aaPredicted RBP12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 AIFM3Q96NN9 605 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 DHX36Q9H2U1 1008 aaKnown RBP12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 ORC3Q9UBD5 711 aaPredicted RBP12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 CNTNAP1P78357 1384 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 WDR33Q9C0J8 1336 aaKnown RBP12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 NAV1Q8NEY1 1877 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 MYO1BO43795 1136 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 ENTPD3O75355 529 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 NTRK3Q16288 839 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 C9orf131Q5VYM1 1079 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 NEDD1Q8NHV4 660 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 DPF2Q92785 391 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 TRIM34Q9BYJ4 488 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 KAT14Q9H8E8 782 aa12.08□□□□□ -0.48
PABPC1P4-201ENST00000539977 hCG_1642624A0A1W2PR95 340 aa12.07□□□□□ -0.48
PABPC1P4-201ENST00000539977 GDF11O95390 407 aa12.07□□□□□ -0.48
PABPC1P4-201ENST00000539977 PLEKHA8P1O95397 391 aa12.07□□□□□ -0.48
PABPC1P4-201ENST00000539977 BAG4O95429 457 aaKnown RBP12.07□□□□□ -0.48
PABPC1P4-201ENST00000539977 EPS15P42566 896 aa12.07□□□□□ -0.48
PABPC1P4-201ENST00000539977 MIGA2Q7L4E1 593 aa12.07□□□□□ -0.48
PABPC1P4-201ENST00000539977 PNMA1Q8ND90 353 aa12.07□□□□□ -0.48
PABPC1P4-201ENST00000539977 FAM151AQ8WW52 585 aa12.07□□□□□ -0.48
PABPC1P4-201ENST00000539977 TMEM47Q9BQJ4 181 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms