RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 KIAA2012Q0VF49 1180 aa19.9■□□□□ 0.78
LTBR-207ENST00000539925 TROAPQ12815 778 aa19.9■□□□□ 0.78
LTBR-207ENST00000539925 KRT40Q6A162 431 aa19.9■□□□□ 0.78
LTBR-207ENST00000539925 CCDC144CPQ8IYA2 1237 aa19.9■□□□□ 0.78
LTBR-207ENST00000539925 TTLL6Q8N841 843 aa19.9■□□□□ 0.78
LTBR-207ENST00000539925 KCNG4Q8TDN1 519 aa19.9■□□□□ 0.78
LTBR-207ENST00000539925 DDX19AQ9NUU7 478 aaKnown RBP19.9■□□□□ 0.78
LTBR-207ENST00000539925 POLR3EQ9NVU0 708 aa19.9■□□□□ 0.78
LTBR-207ENST00000539925 DLEC1Q9Y238 1755 aa19.9■□□□□ 0.78
LTBR-207ENST00000539925 CHRNA5P30532 468 aa19.89■□□□□ 0.77
LTBR-207ENST00000539925 GNAQP50148 359 aa19.89■□□□□ 0.77
LTBR-207ENST00000539925 TFAP4Q01664 338 aa19.89■□□□□ 0.77
LTBR-207ENST00000539925 GUCY1B3Q02153 619 aa19.89■□□□□ 0.77
LTBR-207ENST00000539925 GNL2Q13823 731 aaKnown RBP19.89■□□□□ 0.77
LTBR-207ENST00000539925 ANP32BQ92688 251 aaKnown RBP19.89■□□□□ 0.77
LTBR-207ENST00000539925 PHKBQ93100 1093 aa19.89■□□□□ 0.77
LTBR-207ENST00000539925 KAT14Q9H8E8 782 aa19.89■□□□□ 0.77
LTBR-207ENST00000539925 MYO3BQ8WXR4 1341 aa19.89■□□□□ 0.77
LTBR-207ENST00000539925 USP17L3A6NCW0 530 aa19.88■□□□□ 0.77
LTBR-207ENST00000539925 USP17L4A6NCW7 530 aa19.88■□□□□ 0.77
LTBR-207ENST00000539925 PRPF3O43395 683 aaKnown RBP19.88■□□□□ 0.77
LTBR-207ENST00000539925 TSPY3P0CV98 308 aa19.88■□□□□ 0.77
LTBR-207ENST00000539925 TSPY8P0CW00 308 aa19.88■□□□□ 0.77
LTBR-207ENST00000539925 FOSBP53539 338 aa19.88■□□□□ 0.77
LTBR-207ENST00000539925 CCDC93Q567U6 631 aa19.88■□□□□ 0.77
LTBR-207ENST00000539925 MYSM1Q5VVJ2 828 aa19.88■□□□□ 0.77
LTBR-207ENST00000539925 OLFM4Q6UX06 510 aa19.88■□□□□ 0.77
LTBR-207ENST00000539925 USP17L1Q7RTZ2 530 aa19.88■□□□□ 0.77
LTBR-207ENST00000539925 DEFB132Q7Z7B7 95 aa19.88■□□□□ 0.77
LTBR-207ENST00000539925 NBPF11Q86T75 865 aa19.88■□□□□ 0.77
LTBR-207ENST00000539925 CERS5Q8N5B7 392 aa19.88■□□□□ 0.77
LTBR-207ENST00000539925 U2AF2P26368 475 aaKnown RBP eCLIP19.87■□□□□ 0.771e-6■■■■■ 28.8
LTBR-207ENST00000539925 PPP4R3BQ5MIZ7 849 aa19.87■□□□□ 0.77
LTBR-207ENST00000539925 GAS2L3Q86XJ1 694 aa19.87■□□□□ 0.77
LTBR-207ENST00000539925 ZDHHC15Q96MV8 337 aa19.87■□□□□ 0.77
LTBR-207ENST00000539925 PSMD1Q99460 953 aa19.87■□□□□ 0.77
LTBR-207ENST00000539925 SLX4Q8IY92 1834 aa19.87■□□□□ 0.77
LTBR-207ENST00000539925 SYCE3A1L190 88 aa19.87■□□□□ 0.77
LTBR-207ENST00000539925 ECE2O60344 883 aa19.87■□□□□ 0.77
LTBR-207ENST00000539925 NPM3O75607 178 aaKnown RBP19.87■□□□□ 0.77
LTBR-207ENST00000539925 XRCC6P12956 609 aaKnown RBP eCLIP19.87■□□□□ 0.77
LTBR-207ENST00000539925 FAM47AQ5JRC9 791 aa19.87■□□□□ 0.77
LTBR-207ENST00000539925 TMTC3Q6ZXV5 915 aa19.87■□□□□ 0.77
LTBR-207ENST00000539925 FAM177A1Q8N128 213 aaPredicted RBP19.87■□□□□ 0.77
LTBR-207ENST00000539925 FOXP1Q9H334 677 aaPredicted RBP19.87■□□□□ 0.77
LTBR-207ENST00000539925 SWAP70Q9UH65 585 aa19.87■□□□□ 0.77
LTBR-207ENST00000539925 SNED1Q8TER0 1413 aa19.86■□□□□ 0.77
LTBR-207ENST00000539925 NASPP49321 788 aaPredicted RBP19.86■□□□□ 0.77
LTBR-207ENST00000539925 CDK8P49336 464 aa19.86■□□□□ 0.77
LTBR-207ENST00000539925 JMYQ8N9B5 988 aa19.86■□□□□ 0.77
LTBR-207ENST00000539925 NEDD1Q8NHV4 660 aa19.86■□□□□ 0.77
LTBR-207ENST00000539925 BICD2Q8TD16 824 aa19.86■□□□□ 0.77
LTBR-207ENST00000539925 USP28Q96RU2 1077 aa19.86■□□□□ 0.77
LTBR-207ENST00000539925 TSPY26PQ9H489 355 aa19.86■□□□□ 0.77
LTBR-207ENST00000539925 DDX60LQ5H9U9 1706 aaKnown RBP19.85■□□□□ 0.77
LTBR-207ENST00000539925 SMIM22K7EJ46 135 aa19.85■□□□□ 0.77
LTBR-207ENST00000539925 PPFIA3O75145 1194 aa19.85■□□□□ 0.77
LTBR-207ENST00000539925 MMP1P03956 469 aa19.85■□□□□ 0.77
LTBR-207ENST00000539925 RASA1P20936 1047 aa19.85■□□□□ 0.77
LTBR-207ENST00000539925 PLCD1P51178 756 aa19.85■□□□□ 0.77
LTBR-207ENST00000539925 DACT2Q5SW24 774 aa19.85■□□□□ 0.77
LTBR-207ENST00000539925 LZTS2Q9BRK4 669 aa19.85■□□□□ 0.77
LTBR-207ENST00000539925 DBNDD1Q9H9R9 158 aa19.85■□□□□ 0.77
LTBR-207ENST00000539925 USP40Q9NVE5 1235 aa19.85■□□□□ 0.77
LTBR-207ENST00000539925 SAP30BPQ9UHR5 308 aaKnown RBP19.85■□□□□ 0.77
LTBR-207ENST00000539925 SERPINA10Q9UK55 444 aa19.85■□□□□ 0.77
LTBR-207ENST00000539925 MYH15Q9Y2K3 1946 aa19.85■□□□□ 0.77
LTBR-207ENST00000539925 CRKP46108 304 aa19.84■□□□□ 0.77
LTBR-207ENST00000539925 OTUD7BQ6GQQ9 843 aa19.84■□□□□ 0.77
LTBR-207ENST00000539925 RCSD1Q6JBY9 416 aa19.84■□□□□ 0.77
LTBR-207ENST00000539925 NUP62CLQ9H1M0 184 aa19.84■□□□□ 0.77
LTBR-207ENST00000539925 A0A1W2PQ27 194 aa19.84■□□□□ 0.77
LTBR-207ENST00000539925 A0A1W2PQ64 194 aa19.84■□□□□ 0.77
LTBR-207ENST00000539925 A0A1W2PQD8 194 aa19.84■□□□□ 0.77
LTBR-207ENST00000539925 HLA-DOAP06340 250 aa19.84■□□□□ 0.77
LTBR-207ENST00000539925 TGFB2P61812 414 aa19.84■□□□□ 0.77
LTBR-207ENST00000539925 FUT2Q10981 343 aa19.84■□□□□ 0.77
LTBR-207ENST00000539925 STK38Q15208 465 aa19.84■□□□□ 0.77
LTBR-207ENST00000539925 SF3A1Q15459 793 aaKnown RBP19.84■□□□□ 0.77
LTBR-207ENST00000539925 LINC00301Q8NCQ3 95 aa19.84■□□□□ 0.77
LTBR-207ENST00000539925 DYNLL2Q96FJ2 89 aa19.84■□□□□ 0.77
LTBR-207ENST00000539925 DHX36Q9H2U1 1008 aaKnown RBP19.84■□□□□ 0.77
LTBR-207ENST00000539925 BRMS1Q9HCU9 246 aa19.84■□□□□ 0.77
LTBR-207ENST00000539925 PLIN4Q96Q06 1357 aa19.83■□□□□ 0.77
LTBR-207ENST00000539925 FOCADQ5VW36 1801 aa19.83■□□□□ 0.77
LTBR-207ENST00000539925 CTAGE5O15320 804 aa19.83■□□□□ 0.76
LTBR-207ENST00000539925 ANO1Q5XXA6 986 aa19.83■□□□□ 0.76
LTBR-207ENST00000539925 CCDC73Q6ZRK6 1079 aa19.83■□□□□ 0.76
LTBR-207ENST00000539925 PNMA1Q8ND90 353 aa19.83■□□□□ 0.76
LTBR-207ENST00000539925 PGBD1Q96JS3 809 aa19.83■□□□□ 0.76
LTBR-207ENST00000539925 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.83■□□□□ 0.76
LTBR-207ENST00000539925 F8W031 263 aaPredicted RBP19.82■□□□□ 0.76
LTBR-207ENST00000539925 PPIP5K2O43314 1243 aa19.82■□□□□ 0.76
LTBR-207ENST00000539925 WDHD1O75717 1129 aaPredicted RBP19.82■□□□□ 0.76
LTBR-207ENST00000539925 POLD1P28340 1107 aa19.82■□□□□ 0.76
LTBR-207ENST00000539925 ADALQ6DHV7 355 aa19.82■□□□□ 0.76
LTBR-207ENST00000539925 APOBEC3HQ6NTF7 200 aaKnown RBP19.82■□□□□ 0.76
LTBR-207ENST00000539925 NOSTRINQ8IVI9 506 aa19.82■□□□□ 0.76
LTBR-207ENST00000539925 EHD4Q9H223 541 aa19.82■□□□□ 0.76
LTBR-207ENST00000539925 CDK5RAP2Q96SN8 1893 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms