RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 ELP3Q9H9T3 547 aa15.49■□□□□ 0.07
CCDC42-202ENST00000539522 ABT1Q9ULW3 272 aaKnown RBP15.49■□□□□ 0.07
CCDC42-202ENST00000539522 RBM8AQ9Y5S9 174 aaKnown RBP15.49■□□□□ 0.07
CCDC42-202ENST00000539522 IREB2P48200 963 aaKnown RBP15.48■□□□□ 0.07
CCDC42-202ENST00000539522 NECTIN1Q15223 517 aa15.48■□□□□ 0.07
CCDC42-202ENST00000539522 RGMBQ6NW40 437 aa15.48■□□□□ 0.07
CCDC42-202ENST00000539522 CLEC10AQ8IUN9 316 aa15.48■□□□□ 0.07
CCDC42-202ENST00000539522 SIAH1Q8IUQ4 282 aa15.48■□□□□ 0.07
CCDC42-202ENST00000539522 SCYL3Q8IZE3 742 aa15.48■□□□□ 0.07
CCDC42-202ENST00000539522 CRACR2BQ8N4Y2 399 aaPredicted RBP15.48■□□□□ 0.07
CCDC42-202ENST00000539522 HOOK2Q96ED9 719 aa15.48■□□□□ 0.07
CCDC42-202ENST00000539522 TSHZ2Q9NRE2 1034 aa15.48■□□□□ 0.07
CCDC42-202ENST00000539522 NEDD4P46934 1319 aa15.47■□□□□ 0.07
CCDC42-202ENST00000539522 SPDYE5A6NIY4 337 aa15.47■□□□□ 0.07
CCDC42-202ENST00000539522 CTNND1O60716 968 aaKnown RBP15.47■□□□□ 0.07
CCDC42-202ENST00000539522 SLC10A3P09131 477 aa15.47■□□□□ 0.07
CCDC42-202ENST00000539522 PTPRAP18433 802 aa15.47■□□□□ 0.07
CCDC42-202ENST00000539522 ANO2Q9NQ90 1003 aa15.47■□□□□ 0.07
CCDC42-202ENST00000539522 ZBTB21Q9ULJ3 1066 aa15.47■□□□□ 0.07
CCDC42-202ENST00000539522 LOC285556D6RIA3 1793 aa15.47■□□□□ 0.07
CCDC42-202ENST00000539522 IGKV6D-41A0A0C4DH26 115 aa15.46■□□□□ 0.07
CCDC42-202ENST00000539522 UNCXA6NJT0 531 aa15.46■□□□□ 0.07
CCDC42-202ENST00000539522 GH2P01242 217 aa15.46■□□□□ 0.07
CCDC42-202ENST00000539522 VEGFBP49765 207 aa15.46■□□□□ 0.07
CCDC42-202ENST00000539522 MOGSQ13724 837 aa15.46■□□□□ 0.07
CCDC42-202ENST00000539522 DEFB115Q30KQ5 88 aa15.46■□□□□ 0.07
CCDC42-202ENST00000539522 RASEFQ8IZ41 740 aa15.46■□□□□ 0.07
CCDC42-202ENST00000539522 STAG1Q8WVM7 1258 aa15.46■□□□□ 0.07
CCDC42-202ENST00000539522 DDRGK1Q96HY6 314 aa15.46■□□□□ 0.07
CCDC42-202ENST00000539522 WNK4Q96J92 1243 aa15.46■□□□□ 0.07
CCDC42-202ENST00000539522 SWAP70Q9UH65 585 aa15.46■□□□□ 0.07
CCDC42-202ENST00000539522 SLC27A2O14975 620 aa15.45■□□□□ 0.06
CCDC42-202ENST00000539522 AOC2O75106 756 aa15.45■□□□□ 0.06
CCDC42-202ENST00000539522 DGKZQ13574 1117 aa15.45■□□□□ 0.06
CCDC42-202ENST00000539522 CERKLQ49MI3 558 aaPredicted RBP15.45■□□□□ 0.06
CCDC42-202ENST00000539522 SPRYD7Q5W111 196 aa15.45■□□□□ 0.06
CCDC42-202ENST00000539522 KCNB2Q92953 911 aa15.45■□□□□ 0.06
CCDC42-202ENST00000539522 OPTNQ96CV9 577 aa15.45■□□□□ 0.06
CCDC42-202ENST00000539522 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.45■□□□□ 0.06
CCDC42-202ENST00000539522 U3KPZ7 1027 aaPredicted RBP15.45■□□□□ 0.06
CCDC42-202ENST00000539522 PLIN4Q96Q06 1357 aa15.45■□□□□ 0.06
CCDC42-202ENST00000539522 A0A1W2PRG0 241 aa15.44■□□□□ 0.06
CCDC42-202ENST00000539522 IRF6O14896 467 aa15.44■□□□□ 0.06
CCDC42-202ENST00000539522 ORC4O43929 436 aa15.44■□□□□ 0.06
CCDC42-202ENST00000539522 EIF5BO60841 1220 aaKnown RBP15.44■□□□□ 0.06
CCDC42-202ENST00000539522 ZNF157P51786 506 aaPredicted RBP15.44■□□□□ 0.06
CCDC42-202ENST00000539522 MKRN3Q13064 507 aaKnown RBP15.44■□□□□ 0.06
CCDC42-202ENST00000539522 SEPT2Q15019 361 aa15.44■□□□□ 0.06
CCDC42-202ENST00000539522 FAM47AQ5JRC9 791 aa15.44■□□□□ 0.06
CCDC42-202ENST00000539522 AKNAD1Q5T1N1 836 aa15.44■□□□□ 0.06
CCDC42-202ENST00000539522 CREB3L3Q68CJ9 461 aa15.44■□□□□ 0.06
CCDC42-202ENST00000539522 SLC10A4Q96EP9 437 aa15.44■□□□□ 0.06
CCDC42-202ENST00000539522 MS4A4AQ96JQ5 239 aa15.44■□□□□ 0.06
CCDC42-202ENST00000539522 CAPNS2Q96L46 248 aa15.44■□□□□ 0.06
CCDC42-202ENST00000539522 USP26Q9BXU7 913 aa15.44■□□□□ 0.06
CCDC42-202ENST00000539522 IL17RBQ9NRM6 502 aa15.44■□□□□ 0.06
CCDC42-202ENST00000539522 TAOK2Q9UL54 1235 aa15.44■□□□□ 0.06
CCDC42-202ENST00000539522 AFG3L2Q9Y4W6 797 aa15.44■□□□□ 0.06
CCDC42-202ENST00000539522 MYH4Q9Y623 1939 aa15.44■□□□□ 0.06
CCDC42-202ENST00000539522 ZNF213O14771 459 aa15.43■□□□□ 0.06
CCDC42-202ENST00000539522 NMT2O60551 498 aa15.43■□□□□ 0.06
CCDC42-202ENST00000539522 ABCB5Q2M3G0 1257 aa15.43■□□□□ 0.06
CCDC42-202ENST00000539522 ERO1BQ86YB8 467 aa15.43■□□□□ 0.06
CCDC42-202ENST00000539522 ACER1Q8TDN7 264 aa15.43■□□□□ 0.06
CCDC42-202ENST00000539522 OTUD5Q96G74 571 aa15.43■□□□□ 0.06
CCDC42-202ENST00000539522 KCNH4Q9UQ05 1017 aa15.43■□□□□ 0.06
CCDC42-202ENST00000539522 CSADQ9Y600 493 aa15.43■□□□□ 0.06
CCDC42-202ENST00000539522 WDR33Q9C0J8 1336 aaKnown RBP15.43■□□□□ 0.06
CCDC42-202ENST00000539522 E7EWF7 191 aa15.42■□□□□ 0.06
CCDC42-202ENST00000539522 HSPA4P34932 840 aa15.42■□□□□ 0.06
CCDC42-202ENST00000539522 ECE1P42892 770 aa15.42■□□□□ 0.06
CCDC42-202ENST00000539522 NOVP48745 357 aa15.42■□□□□ 0.06
CCDC42-202ENST00000539522 PPATQ06203 517 aa15.42■□□□□ 0.06
CCDC42-202ENST00000539522 PPIL2Q13356 520 aa15.42■□□□□ 0.06
CCDC42-202ENST00000539522 KIAA1755Q5JYT7 1200 aa15.42■□□□□ 0.06
CCDC42-202ENST00000539522 CASC1Q6TDU7 716 aa15.42■□□□□ 0.06
CCDC42-202ENST00000539522 AMOTL1Q8IY63 956 aa15.42■□□□□ 0.06
CCDC42-202ENST00000539522 NEDD1Q8NHV4 660 aa15.42■□□□□ 0.06
CCDC42-202ENST00000539522 PTPN18Q99952 460 aa15.42■□□□□ 0.06
CCDC42-202ENST00000539522 CTNNA3Q9UI47 895 aa15.42■□□□□ 0.06
CCDC42-202ENST00000539522 ZHX2Q9Y6X8 837 aa15.42■□□□□ 0.06
CCDC42-202ENST00000539522 PARP14Q460N5 1801 aa15.42■□□□□ 0.06
CCDC42-202ENST00000539522 RLFQ13129 1914 aa15.41■□□□□ 0.06
CCDC42-202ENST00000539522 ASNSP08243 561 aa15.41■□□□□ 0.06
CCDC42-202ENST00000539522 ANTXR2P58335 489 aa15.41■□□□□ 0.06
CCDC42-202ENST00000539522 TFAP4Q01664 338 aa15.41■□□□□ 0.06
CCDC42-202ENST00000539522 IMMTQ16891 758 aaKnown RBP15.41■□□□□ 0.06
CCDC42-202ENST00000539522 ADCK5Q3MIX3 580 aa15.41■□□□□ 0.06
CCDC42-202ENST00000539522 KIAA1211Q6ZU35 1233 aa15.41■□□□□ 0.06
CCDC42-202ENST00000539522 CYB5R4Q7L1T6 521 aa15.41■□□□□ 0.06
CCDC42-202ENST00000539522 WDR18Q9BV38 432 aa15.41■□□□□ 0.06
CCDC42-202ENST00000539522 TRIM34Q9BYJ4 488 aa15.41■□□□□ 0.06
CCDC42-202ENST00000539522 MKNK2Q9HBH9 465 aa15.41■□□□□ 0.06
CCDC42-202ENST00000539522 TESPA1A2RU30 521 aaPredicted RBP15.4■□□□□ 0.06
CCDC42-202ENST00000539522 USP17L5A8MUK1 530 aa15.4■□□□□ 0.06
CCDC42-202ENST00000539522 B4E1Z4 1266 aa15.4■□□□□ 0.06
CCDC42-202ENST00000539522 ZBTB48P10074 688 aaPredicted RBP15.4■□□□□ 0.06
CCDC42-202ENST00000539522 KIF23Q02241 960 aaPredicted RBP15.4■□□□□ 0.06
CCDC42-202ENST00000539522 PDE4BQ07343 736 aa15.4■□□□□ 0.06
CCDC42-202ENST00000539522 TSGA10IPQ3SY00 556 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms