RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 DLK2Q6UY11 383 aa10.86□□□□□ -0.67
RTN4IP1-204ENST00000539449 USP48Q86UV5 1035 aa10.86□□□□□ -0.67
RTN4IP1-204ENST00000539449 ZFPM1Q8IX07 1006 aa10.86□□□□□ -0.67
RTN4IP1-204ENST00000539449 DYNLL2Q96FJ2 89 aa10.86□□□□□ -0.67
RTN4IP1-204ENST00000539449 ANAPC4Q9UJX5 808 aa10.86□□□□□ -0.67
RTN4IP1-204ENST00000539449 POLR2AP24928 1970 aaKnown RBP10.86□□□□□ -0.67
RTN4IP1-204ENST00000539449 KIAA0100Q14667 2235 aaKnown RBP10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 POTEFA5A3E0 1075 aa10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 SLC10A3P09131 477 aa10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 SLURP2P0DP57 97 aa10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 PLCD1P51178 756 aa10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 ST3GAL1Q11201 340 aa10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 PICALMQ13492 652 aa10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 AKNAD1Q5T1N1 836 aa10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 C12orf60Q5U649 245 aa10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 Q6ZUG5 572 aa10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 DHX32Q7L7V1 743 aaKnown RBP10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 REM2Q8IYK8 340 aaPredicted RBP10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 NCOA7Q8NI08 942 aa10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 STAG1Q8WVM7 1258 aa10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 TMX3Q96JJ7 454 aa10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 ALDH8A1Q9H2A2 487 aaPredicted RBP10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 TDRD3Q9H7E2 651 aaKnown RBP10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 GBA2Q9HCG7 927 aaPredicted RBP10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 MCM9Q9NXL9 1143 aa10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 SERPINA10Q9UK55 444 aa10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.85□□□□□ -0.67
RTN4IP1-204ENST00000539449 FLT1P17948 1338 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 MYO3BQ8WXR4 1341 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 PRC1O43663 620 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 PRDM1O75626 825 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 FGRP09769 529 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 PLCG2P16885 1265 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 GMPSP49915 693 aaPredicted RBP10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 ME3Q16798 604 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 RRP12Q5JTH9 1297 aaKnown RBP10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 C2orf69Q8N8R5 385 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 SLC44A5Q8NCS7 719 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 AGBL3Q8NEM8 1001 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 TRPM4Q8TD43 1214 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 ZBED3Q96IU2 234 aaPredicted RBP10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 SENP2Q9HC62 589 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 FAM198AQ9UFP1 575 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 TPCN1Q9ULQ1 816 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 COL6A3P12111 3177 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 MYH8P13535 1937 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 PITPNM2Q9BZ72 1349 aa10.84□□□□□ -0.67
RTN4IP1-204ENST00000539449 KDM4AO75164 1064 aa10.83□□□□□ -0.68
RTN4IP1-204ENST00000539449 TBC1D8O95759 1140 aa10.83□□□□□ -0.68
RTN4IP1-204ENST00000539449 EGFRP00533 1210 aa10.83□□□□□ -0.68
RTN4IP1-204ENST00000539449 POLR3DP05423 398 aaPredicted RBP10.83□□□□□ -0.68
RTN4IP1-204ENST00000539449 MNX1P50219 401 aaPredicted RBP10.83□□□□□ -0.68
RTN4IP1-204ENST00000539449 APOBRQ0VD83 1088 aa10.83□□□□□ -0.68
RTN4IP1-204ENST00000539449 TNIP1Q15025 636 aa10.83□□□□□ -0.68
RTN4IP1-204ENST00000539449 MFSD6Q6ZSS7 791 aa10.83□□□□□ -0.68
RTN4IP1-204ENST00000539449 SH3BP5LQ7L8J4 393 aa10.83□□□□□ -0.68
RTN4IP1-204ENST00000539449 ZKSCAN3Q9BRR0 538 aa10.83□□□□□ -0.68
RTN4IP1-204ENST00000539449 AGXT2Q9BYV1 514 aa10.83□□□□□ -0.68
RTN4IP1-204ENST00000539449 ZSWIM5Q9P217 1185 aa10.83□□□□□ -0.68
RTN4IP1-204ENST00000539449 ARPP21Q9UBL0 812 aaPredicted RBP10.83□□□□□ -0.68
RTN4IP1-204ENST00000539449 LIMCH1Q9UPQ0 1083 aa10.83□□□□□ -0.68
RTN4IP1-204ENST00000539449 CLRN2A0PK11 232 aa10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 SPDYE2BA6NHP3 402 aa10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 SPDYE6P0CI01 402 aa10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 MCM5P33992 734 aa10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 ZNF280AP59817 542 aaPredicted RBP10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 TCP10Q12799 353 aa10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 CUL4AQ13619 759 aa10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 RALYLQ86SE5 291 aaKnown RBP10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 CERS3Q8IU89 383 aa10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 NECAB1Q8N987 351 aa10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 BRF1Q92994 677 aa10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 OSBPL5Q9H0X9 879 aaPredicted RBP10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 SLKQ9H2G2 1235 aaPredicted RBP10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 TOMM22Q9NS69 142 aa10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 ZNF70Q9UC06 446 aaPredicted RBP10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 BRPF3Q9ULD4 1205 aa10.82□□□□□ -0.68
RTN4IP1-204ENST00000539449 ROBO3Q96MS0 1386 aa10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 DDTLA6NHG4 134 aaPredicted RBP10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 SH2B2O14492 632 aaPredicted RBP10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 HMGB1P09429 215 aaKnown RBP10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 MCM2P49736 904 aa10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 DLGAP5Q15398 846 aa10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 NBPF9Q3BBW0 867 aa10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 FAM47AQ5JRC9 791 aa10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 RBM26Q5T8P6 1007 aaKnown RBP10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 SAMD7Q7Z3H4 446 aa10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 RAB11FIP4Q86YS3 637 aa10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 MICALL2Q8IY33 904 aa10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 MTMR14Q8NCE2 650 aa10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 IGDCC4Q8TDY8 1250 aa10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 OTUD5Q96G74 571 aa10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 IDI2Q9BXS1 227 aa10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 KRT23Q9C075 422 aa10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 DAXXQ9UER7 740 aaPredicted RBP10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 CNOT7Q9UIV1 285 aaKnown RBP10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 SCAF8Q9UPN6 1271 aaKnown RBP10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 ASTN2O75129 1339 aaPredicted RBP10.81□□□□□ -0.68
RTN4IP1-204ENST00000539449 TCP10L2B9ZVM9 353 aa10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 GPR25O00155 361 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms