RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 HIP1O00291 1037 aa13.58□□□□□ -0.24
NEK6-212ENST00000539416 PFKFB2O60825 505 aa13.58□□□□□ -0.24
NEK6-212ENST00000539416 RNF40O75150 1001 aa13.58□□□□□ -0.24
NEK6-212ENST00000539416 CHGBP05060 677 aa13.58□□□□□ -0.24
NEK6-212ENST00000539416 TBX2Q13207 712 aaPredicted RBP13.58□□□□□ -0.24
NEK6-212ENST00000539416 ATL3Q6DD88 541 aa13.58□□□□□ -0.24
NEK6-212ENST00000539416 NLRP10Q86W26 655 aa13.58□□□□□ -0.24
NEK6-212ENST00000539416 DHX37Q8IY37 1157 aaKnown RBP13.58□□□□□ -0.24
NEK6-212ENST00000539416 RTEL1Q9NZ71 1219 aa13.58□□□□□ -0.24
NEK6-212ENST00000539416 CDC23Q9UJX2 597 aa13.58□□□□□ -0.24
NEK6-212ENST00000539416 UBR3Q6ZT12 1888 aa13.57□□□□□ -0.24
NEK6-212ENST00000539416 STX10O60499 249 aa13.57□□□□□ -0.24
NEK6-212ENST00000539416 PCCAP05165 728 aaPredicted RBP13.57□□□□□ -0.24
NEK6-212ENST00000539416 MYL5Q02045 173 aa13.57□□□□□ -0.24
NEK6-212ENST00000539416 STK38Q15208 465 aa13.57□□□□□ -0.24
NEK6-212ENST00000539416 EAF2Q96CJ1 260 aaPredicted RBP13.57□□□□□ -0.24
NEK6-212ENST00000539416 ZNF652Q9Y2D9 606 aa13.57□□□□□ -0.24
NEK6-212ENST00000539416 SYF2O95926 243 aaKnown RBP13.57□□□□□ -0.24
NEK6-212ENST00000539416 AFAP1L1Q8TED9 768 aa13.57□□□□□ -0.24
NEK6-212ENST00000539416 LLPHQ9BRT6 129 aaKnown RBP13.57□□□□□ -0.24
NEK6-212ENST00000539416 POTEB2H3BUK9 544 aa13.56□□□□□ -0.24
NEK6-212ENST00000539416 POLR3DP05423 398 aaPredicted RBP13.56□□□□□ -0.24
NEK6-212ENST00000539416 PARP10Q53GL7 1025 aa13.56□□□□□ -0.24
NEK6-212ENST00000539416 TRAPPC3LQ5T215 181 aa13.56□□□□□ -0.24
NEK6-212ENST00000539416 USPL1Q5W0Q7 1092 aa13.56□□□□□ -0.24
NEK6-212ENST00000539416 ZBTB38Q8NAP3 1195 aaPredicted RBP13.56□□□□□ -0.24
NEK6-212ENST00000539416 ARHGEF1Q92888 912 aaKnown RBP13.56□□□□□ -0.24
NEK6-212ENST00000539416 PRPF6O94906 941 aaKnown RBP13.56□□□□□ -0.24
NEK6-212ENST00000539416 CCT5P48643 541 aa13.56□□□□□ -0.24
NEK6-212ENST00000539416 RABL6Q3YEC7 729 aaPredicted RBP13.56□□□□□ -0.24
NEK6-212ENST00000539416 CCDC129Q6ZRS4 1044 aa13.56□□□□□ -0.24
NEK6-212ENST00000539416 UBE3BQ7Z3V4 1068 aa13.56□□□□□ -0.24
NEK6-212ENST00000539416 CEP112Q8N8E3 955 aa13.56□□□□□ -0.24
NEK6-212ENST00000539416 RIN2Q8WYP3 895 aaPredicted RBP13.56□□□□□ -0.24
NEK6-212ENST00000539416 MED4Q9NPJ6 270 aa13.56□□□□□ -0.24
NEK6-212ENST00000539416 CDHR2Q9BYE9 1310 aa13.56□□□□□ -0.24
NEK6-212ENST00000539416 CYP21A2P08686 494 aa13.55□□□□□ -0.24
NEK6-212ENST00000539416 PFKFB1P16118 471 aa13.55□□□□□ -0.24
NEK6-212ENST00000539416 KRT32Q14532 448 aa13.55□□□□□ -0.24
NEK6-212ENST00000539416 STOX1Q6ZVD7 989 aa13.55□□□□□ -0.24
NEK6-212ENST00000539416 PLA2G12BQ9BX93 195 aa13.55□□□□□ -0.24
NEK6-212ENST00000539416 RABEP2Q9H5N1 569 aa13.55□□□□□ -0.24
NEK6-212ENST00000539416 C4AP0C0L4 1744 aa13.55□□□□□ -0.24
NEK6-212ENST00000539416 SOWAHDA6NJG2 315 aa13.55□□□□□ -0.24
NEK6-212ENST00000539416 SASH1O94885 1247 aa13.55□□□□□ -0.24
NEK6-212ENST00000539416 AMIGO3Q86WK7 504 aa13.55□□□□□ -0.24
NEK6-212ENST00000539416 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
NEK6-212ENST00000539416 CAMKK2Q96RR4 588 aa13.55□□□□□ -0.24
NEK6-212ENST00000539416 FAM169AQ9Y6X4 670 aa13.55□□□□□ -0.24
NEK6-212ENST00000539416 UBN2Q6ZU65 1347 aa13.55□□□□□ -0.24
NEK6-212ENST00000539416 CCDC196A0A1B0GTZ2 297 aa13.54□□□□□ -0.24
NEK6-212ENST00000539416 SPTLC2O15270 562 aa13.54□□□□□ -0.24
NEK6-212ENST00000539416 GPTP24298 496 aa13.54□□□□□ -0.24
NEK6-212ENST00000539416 FOXO4P98177 505 aa13.54□□□□□ -0.24
NEK6-212ENST00000539416 EPHA10Q5JZY3 1008 aa13.54□□□□□ -0.24
NEK6-212ENST00000539416 IGSF22Q8N9C0 903 aa13.54□□□□□ -0.24
NEK6-212ENST00000539416 NOA1Q8NC60 698 aaKnown RBP13.54□□□□□ -0.24
NEK6-212ENST00000539416 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.54□□□□□ -0.24
NEK6-212ENST00000539416 EHD4Q9H223 541 aa13.54□□□□□ -0.24
NEK6-212ENST00000539416 MROH7-TTC4A0A0A0MT08 1334 aa13.54□□□□□ -0.24
NEK6-212ENST00000539416 CCDC189A1A4V9 331 aa13.54□□□□□ -0.24
NEK6-212ENST00000539416 KIF1CO43896 1103 aaKnown RBP13.54□□□□□ -0.24
NEK6-212ENST00000539416 ZPR1O75312 459 aa13.54□□□□□ -0.24
NEK6-212ENST00000539416 PDE4BQ07343 736 aa13.54□□□□□ -0.24
NEK6-212ENST00000539416 PNOCQ13519 176 aa13.54□□□□□ -0.24
NEK6-212ENST00000539416 KIF4BQ2VIQ3 1234 aa13.54□□□□□ -0.24
NEK6-212ENST00000539416 ZNF569Q5MCW4 686 aa13.54□□□□□ -0.24
NEK6-212ENST00000539416 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.54□□□□□ -0.24
NEK6-212ENST00000539416 TUBE1Q9UJT0 475 aa13.54□□□□□ -0.24
NEK6-212ENST00000539416 FDPSP14324 419 aaKnown RBP13.53□□□□□ -0.24
NEK6-212ENST00000539416 RAD9BQ6WBX8 426 aa13.53□□□□□ -0.24
NEK6-212ENST00000539416 SALL1Q9NSC2 1324 aa13.53□□□□□ -0.24
NEK6-212ENST00000539416 CDC27P30260 824 aa13.53□□□□□ -0.24
NEK6-212ENST00000539416 RFC4P35249 363 aa13.53□□□□□ -0.24
NEK6-212ENST00000539416 TDO2P48775 406 aa13.53□□□□□ -0.24
NEK6-212ENST00000539416 SUSD4Q5VX71 490 aa13.53□□□□□ -0.24
NEK6-212ENST00000539416 SMIM5Q71RC9 77 aa13.53□□□□□ -0.24
NEK6-212ENST00000539416 GJB4Q9NTQ9 266 aa13.53□□□□□ -0.24
NEK6-212ENST00000539416 NDUFB9Q9Y6M9 179 aa13.53□□□□□ -0.24
NEK6-212ENST00000539416 ABL1P00519 1130 aa13.52□□□□□ -0.24
NEK6-212ENST00000539416 KCNG4Q8TDN1 519 aa13.52□□□□□ -0.24
NEK6-212ENST00000539416 SRP68Q9UHB9 627 aaKnown RBP13.52□□□□□ -0.24
NEK6-212ENST00000539416 NIP7Q9Y221 180 aaKnown RBP eCLIP13.52□□□□□ -0.24
NEK6-212ENST00000539416 ADGRG1Q9Y653 693 aa13.52□□□□□ -0.24
NEK6-212ENST00000539416 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.52□□□□□ -0.25
NEK6-212ENST00000539416 CCDC175P0C221 793 aa13.52□□□□□ -0.25
NEK6-212ENST00000539416 MARCKSP29966 332 aaPredicted RBP13.52□□□□□ -0.25
NEK6-212ENST00000539416 SPECC1LQ69YQ0 1117 aa13.52□□□□□ -0.25
NEK6-212ENST00000539416 CPLX2Q6PUV4 134 aaKnown RBP13.52□□□□□ -0.25
NEK6-212ENST00000539416 CCDC125Q86Z20 511 aa13.52□□□□□ -0.25
NEK6-212ENST00000539416 GBP3Q9H0R5 595 aa13.52□□□□□ -0.25
NEK6-212ENST00000539416 KAT14Q9H8E8 782 aa13.52□□□□□ -0.25
NEK6-212ENST00000539416 TRMT112Q9UI30 125 aaKnown RBP13.52□□□□□ -0.25
NEK6-212ENST00000539416 ZC3H4Q9UPT8 1303 aaKnown RBP13.52□□□□□ -0.25
NEK6-212ENST00000539416 CARMIL3Q8ND23 1372 aa13.52□□□□□ -0.25
NEK6-212ENST00000539416 SCP2P22307 547 aa13.51□□□□□ -0.25
NEK6-212ENST00000539416 AARSP49588 968 aaKnown RBP eCLIP13.51□□□□□ -0.25
NEK6-212ENST00000539416 FOXP4Q8IVH2 680 aaPredicted RBP13.51□□□□□ -0.25
NEK6-212ENST00000539416 SLC35F6Q8N357 371 aa13.51□□□□□ -0.25
NEK6-212ENST00000539416 FLAD1Q8NFF5 587 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms