RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 AFG3L2Q9Y4W6 797 aa18■□□□□ 0.47
PRPF19-203ENST00000539180 CCL15-CCL14A0A0B4J2E2 113 aa17.99■□□□□ 0.47
PRPF19-203ENST00000539180 USP17L12C9JPN9 530 aa17.99■□□□□ 0.47
PRPF19-203ENST00000539180 USP17L21D6R901 530 aa17.99■□□□□ 0.47
PRPF19-203ENST00000539180 GDF11O95390 407 aa17.99■□□□□ 0.47
PRPF19-203ENST00000539180 SDSP20132 328 aa17.99■□□□□ 0.47
PRPF19-203ENST00000539180 CTCFP49711 727 aaPredicted RBP17.99■□□□□ 0.47
PRPF19-203ENST00000539180 SNAPC2Q13487 334 aa17.99■□□□□ 0.47
PRPF19-203ENST00000539180 MOGSQ13724 837 aa17.99■□□□□ 0.47
PRPF19-203ENST00000539180 CCL15Q16663 113 aa17.99■□□□□ 0.47
PRPF19-203ENST00000539180 ZNF589Q86UQ0 364 aaPredicted RBP17.99■□□□□ 0.47
PRPF19-203ENST00000539180 SLC44A5Q8NCS7 719 aa17.99■□□□□ 0.47
PRPF19-203ENST00000539180 DDRGK1Q96HY6 314 aa17.99■□□□□ 0.47
PRPF19-203ENST00000539180 CCDC136Q96JN2 1154 aa17.99■□□□□ 0.47
PRPF19-203ENST00000539180 TRIM34Q9BYJ4 488 aa17.99■□□□□ 0.47
PRPF19-203ENST00000539180 ASNSP08243 561 aa17.98■□□□□ 0.47
PRPF19-203ENST00000539180 ERICH6BQ5W0A0 696 aa17.98■□□□□ 0.47
PRPF19-203ENST00000539180 C16orf86Q6ZW13 317 aa17.98■□□□□ 0.47
PRPF19-203ENST00000539180 TBC1D2Q9BYX2 928 aa17.98■□□□□ 0.47
PRPF19-203ENST00000539180 SWAP70Q9UH65 585 aa17.98■□□□□ 0.47
PRPF19-203ENST00000539180 TSKSQ9UJT2 592 aa17.98■□□□□ 0.47
PRPF19-203ENST00000539180 ZHX2Q9Y6X8 837 aa17.98■□□□□ 0.47
PRPF19-203ENST00000539180 CCDC171Q6TFL3 1326 aa17.98■□□□□ 0.47
PRPF19-203ENST00000539180 A0A0G2JLL6 359 aaPredicted RBP17.97■□□□□ 0.47
PRPF19-203ENST00000539180 PATL2C9JE40 543 aaKnown RBP17.97■□□□□ 0.47
PRPF19-203ENST00000539180 CXCL11O14625 94 aa17.97■□□□□ 0.47
PRPF19-203ENST00000539180 CETPP11597 493 aa17.97■□□□□ 0.47
PRPF19-203ENST00000539180 MCMDC2Q4G0Z9 681 aa17.97■□□□□ 0.47
PRPF19-203ENST00000539180 VPS53Q5VIR6 699 aa17.97■□□□□ 0.47
PRPF19-203ENST00000539180 PRRT2Q7Z6L0 340 aaPredicted RBP17.97■□□□□ 0.47
PRPF19-203ENST00000539180 SKAP1Q86WV1 359 aa17.97■□□□□ 0.47
PRPF19-203ENST00000539180 IFNL3Q8IZI9 196 aa17.97■□□□□ 0.47
PRPF19-203ENST00000539180 DYNLL2Q96FJ2 89 aa17.97■□□□□ 0.47
PRPF19-203ENST00000539180 ZCCHC17Q9NP64 241 aaKnown RBP17.97■□□□□ 0.47
PRPF19-203ENST00000539180 ZMYM6O95789 1325 aa17.97■□□□□ 0.47
PRPF19-203ENST00000539180 TRPA1O75762 1119 aa17.96■□□□□ 0.47
PRPF19-203ENST00000539180 ALDH1A1P00352 501 aa17.96■□□□□ 0.47
PRPF19-203ENST00000539180 AMOTL1Q8IY63 956 aa17.96■□□□□ 0.47
PRPF19-203ENST00000539180 FAM43AQ8N2R8 423 aa17.96■□□□□ 0.47
PRPF19-203ENST00000539180 WDR18Q9BV38 432 aa17.96■□□□□ 0.47
PRPF19-203ENST00000539180 CASP8AP2Q9UKL3 1982 aa17.95■□□□□ 0.46
PRPF19-203ENST00000539180 USP17L5A8MUK1 530 aa17.95■□□□□ 0.46
PRPF19-203ENST00000539180 BTBD19C9JJ37 291 aa17.95■□□□□ 0.46
PRPF19-203ENST00000539180 HIP1O00291 1037 aa17.95■□□□□ 0.46
PRPF19-203ENST00000539180 GH2P01242 217 aa17.95■□□□□ 0.46
PRPF19-203ENST00000539180 GUCY1A2P33402 732 aa17.95■□□□□ 0.46
PRPF19-203ENST00000539180 TDO2P48775 406 aa17.95■□□□□ 0.46
PRPF19-203ENST00000539180 LBX1P52954 281 aa17.95■□□□□ 0.46
PRPF19-203ENST00000539180 CERKLQ49MI3 558 aaPredicted RBP17.95■□□□□ 0.46
PRPF19-203ENST00000539180 NOM1Q5C9Z4 860 aaKnown RBP17.95■□□□□ 0.46
PRPF19-203ENST00000539180 ZNF280CQ8ND82 737 aa17.95■□□□□ 0.46
PRPF19-203ENST00000539180 IL25Q9H293 177 aa17.95■□□□□ 0.46
PRPF19-203ENST00000539180 PRDM10Q9NQV6 1147 aa17.95■□□□□ 0.46
PRPF19-203ENST00000539180 TRIM75PA6NK02 468 aa17.94■□□□□ 0.46
PRPF19-203ENST00000539180 CDK8P49336 464 aa17.94■□□□□ 0.46
PRPF19-203ENST00000539180 ANKRD23Q86SG2 305 aa17.94■□□□□ 0.46
PRPF19-203ENST00000539180 NACAP1Q9BZK3 213 aa17.94■□□□□ 0.46
PRPF19-203ENST00000539180 NAPBQ9H115 298 aa17.94■□□□□ 0.46
PRPF19-203ENST00000539180 AS3MTQ9HBK9 375 aa17.94■□□□□ 0.46
PRPF19-203ENST00000539180 DIAPH3Q9NSV4 1193 aa17.94■□□□□ 0.46
PRPF19-203ENST00000539180 RAD50Q92878 1312 aa17.94■□□□□ 0.46
PRPF19-203ENST00000539180 PARP14Q460N5 1801 aa17.93■□□□□ 0.46
PRPF19-203ENST00000539180 ALX1Q15699 326 aa17.93■□□□□ 0.46
PRPF19-203ENST00000539180 ABCB5Q2M3G0 1257 aa17.93■□□□□ 0.46
PRPF19-203ENST00000539180 SH3D19Q5HYK7 790 aa17.93■□□□□ 0.46
PRPF19-203ENST00000539180 GPAT2Q6NUI2 795 aa17.93■□□□□ 0.46
PRPF19-203ENST00000539180 R3HDMLQ9H3Y0 253 aa17.93■□□□□ 0.46
PRPF19-203ENST00000539180 ADGRA2Q96PE1 1338 aa17.93■□□□□ 0.46
PRPF19-203ENST00000539180 ZSWIM8A7E2V4 1837 aa17.93■□□□□ 0.46
PRPF19-203ENST00000539180 PLIN4Q96Q06 1357 aa17.92■□□□□ 0.46
PRPF19-203ENST00000539180 TBC1D8O95759 1140 aa17.92■□□□□ 0.46
PRPF19-203ENST00000539180 APPP05067 770 aa17.92■□□□□ 0.46
PRPF19-203ENST00000539180 HSPD1P10809 573 aaKnown RBP17.92■□□□□ 0.46
PRPF19-203ENST00000539180 AKR1B1P15121 316 aa17.92■□□□□ 0.46
PRPF19-203ENST00000539180 SPP2Q13103 211 aa17.92■□□□□ 0.46
PRPF19-203ENST00000539180 CRHR2Q13324 411 aa17.92■□□□□ 0.46
PRPF19-203ENST00000539180 OTUD7BQ6GQQ9 843 aa17.92■□□□□ 0.46
PRPF19-203ENST00000539180 CWC27Q6UX04 472 aaKnown RBP17.92■□□□□ 0.46
PRPF19-203ENST00000539180 PROCA1Q8NCQ7 364 aaPredicted RBP17.92■□□□□ 0.46
PRPF19-203ENST00000539180 A0A0G2JMZ2 1700 aa17.92■□□□□ 0.46
PRPF19-203ENST00000539180 MYH4Q9Y623 1939 aa17.92■□□□□ 0.46
PRPF19-203ENST00000539180 MINDY4BA8MYZ0 360 aa17.91■□□□□ 0.46
PRPF19-203ENST00000539180 RASA1P20936 1047 aa17.91■□□□□ 0.46
PRPF19-203ENST00000539180 PPARAQ07869 468 aa17.91■□□□□ 0.46
PRPF19-203ENST00000539180 MTMR2Q13614 643 aa17.91■□□□□ 0.46
PRPF19-203ENST00000539180 TMEM179Q6ZVK1 233 aa17.91■□□□□ 0.46
PRPF19-203ENST00000539180 CCDC17Q96LX7 622 aa17.91■□□□□ 0.46
PRPF19-203ENST00000539180 PPP4R2Q9NY27 417 aa17.91■□□□□ 0.46
PRPF19-203ENST00000539180 CHMLP26374 656 aa17.9■□□□□ 0.46
PRPF19-203ENST00000539180 HMGCS2P54868 508 aa17.9■□□□□ 0.46
PRPF19-203ENST00000539180 MFAP1P55081 439 aaKnown RBP17.9■□□□□ 0.46
PRPF19-203ENST00000539180 BACE1P56817 501 aa17.9■□□□□ 0.46
PRPF19-203ENST00000539180 DGKZQ13574 1117 aa17.9■□□□□ 0.46
PRPF19-203ENST00000539180 SEPT2Q15019 361 aa17.9■□□□□ 0.46
PRPF19-203ENST00000539180 TAF1CQ15572 869 aaPredicted RBP17.9■□□□□ 0.46
PRPF19-203ENST00000539180 BMP2KLQ5H9B9 411 aa17.9■□□□□ 0.46
PRPF19-203ENST00000539180 FASTKD5Q7L8L6 764 aaKnown RBP17.9■□□□□ 0.46
PRPF19-203ENST00000539180 ANAPC4Q9UJX5 808 aa17.9■□□□□ 0.46
PRPF19-203ENST00000539180 AGTPBP1Q9UPW5 1226 aa17.9■□□□□ 0.46
PRPF19-203ENST00000539180 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms