RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 CCZ1BP86790 482 aa28.63■■■□□ 2.17
RAB40C-204ENST00000538492 CCZ1P86791 482 aaPredicted RBP28.63■■■□□ 2.17
RAB40C-204ENST00000538492 AKAP17AQ02040 695 aaKnown RBP28.63■■■□□ 2.17
RAB40C-204ENST00000538492 FOXP4Q8IVH2 680 aaPredicted RBP28.63■■■□□ 2.17
RAB40C-204ENST00000538492 ZNF831Q5JPB2 1677 aa28.63■■■□□ 2.17
RAB40C-204ENST00000538492 FBXO2Q9UK22 296 aaPredicted RBP28.63■■■□□ 2.17
RAB40C-204ENST00000538492 PLEKHA8P1O95397 391 aa28.62■■■□□ 2.17
RAB40C-204ENST00000538492 ATP1A3P13637 1013 aa28.62■■■□□ 2.17
RAB40C-204ENST00000538492 PRDX5P30044 214 aa28.62■■■□□ 2.17
RAB40C-204ENST00000538492 HIBADHP31937 336 aaKnown RBP28.62■■■□□ 2.17
RAB40C-204ENST00000538492 TMC6Q7Z403 805 aa28.62■■■□□ 2.17
RAB40C-204ENST00000538492 RNF26Q9BY78 433 aaPredicted RBP28.62■■■□□ 2.17
RAB40C-204ENST00000538492 MYH13Q9UKX3 1938 aa28.62■■■□□ 2.17
RAB40C-204ENST00000538492 CATIPQ7Z7H3 387 aa28.62■■■□□ 2.17
RAB40C-204ENST00000538492 AMIGO3Q86WK7 504 aa28.62■■■□□ 2.17
RAB40C-204ENST00000538492 IQCA1Q86XH1 822 aa28.62■■■□□ 2.17
RAB40C-204ENST00000538492 PCDHA5Q9Y5H7 936 aa28.62■■■□□ 2.17
RAB40C-204ENST00000538492 RPS6KA4O75676 772 aa28.61■■■□□ 2.17
RAB40C-204ENST00000538492 HSD3B7Q9H2F3 369 aa28.61■■■□□ 2.17
RAB40C-204ENST00000538492 FAM205CA6NFA0 338 aa28.61■■■□□ 2.17
RAB40C-204ENST00000538492 PTPREP23469 700 aa28.61■■■□□ 2.17
RAB40C-204ENST00000538492 IKBKBO14920 756 aa28.6■■■□□ 2.17
RAB40C-204ENST00000538492 PKN1Q16512 942 aa28.6■■■□□ 2.17
RAB40C-204ENST00000538492 TXNRD3Q86VQ6 643 aa28.6■■■□□ 2.17
RAB40C-204ENST00000538492 V9GY48 417 aaPredicted RBP28.6■■■□□ 2.17
RAB40C-204ENST00000538492 SEMA3EO15041 775 aa28.6■■■□□ 2.17
RAB40C-204ENST00000538492 ARID3AQ99856 593 aa28.6■■■□□ 2.17
RAB40C-204ENST00000538492 POLR2DO15514 142 aaKnown RBP28.59■■■□□ 2.17
RAB40C-204ENST00000538492 NMT2O60551 498 aa28.59■■■□□ 2.17
RAB40C-204ENST00000538492 OSBPL5Q9H0X9 879 aaPredicted RBP28.59■■■□□ 2.17
RAB40C-204ENST00000538492 GSDMDP57764 484 aa28.59■■■□□ 2.17
RAB40C-204ENST00000538492 FANCCQ00597 558 aa28.59■■■□□ 2.17
RAB40C-204ENST00000538492 FUT2Q10981 343 aa28.59■■■□□ 2.17
RAB40C-204ENST00000538492 VPS72Q15906 364 aa28.59■■■□□ 2.17
RAB40C-204ENST00000538492 SLC4A8Q2Y0W8 1093 aa28.59■■■□□ 2.17
RAB40C-204ENST00000538492 TPTE2Q6XPS3 522 aa28.59■■■□□ 2.17
RAB40C-204ENST00000538492 ZNF710Q8N1W2 664 aa28.59■■■□□ 2.17
RAB40C-204ENST00000538492 TROAPQ12815 778 aa28.58■■■□□ 2.17
RAB40C-204ENST00000538492 PPP2R5BQ15173 497 aa28.58■■■□□ 2.17
RAB40C-204ENST00000538492 PDILTQ8N807 584 aa28.58■■■□□ 2.17
RAB40C-204ENST00000538492 DCP1AQ9NPI6 582 aaPredicted RBP28.58■■■□□ 2.17
RAB40C-204ENST00000538492 TRMT1Q9NXH9 659 aaKnown RBP28.58■■■□□ 2.17
RAB40C-204ENST00000538492 IMPACTQ9P2X3 320 aa28.58■■■□□ 2.17
RAB40C-204ENST00000538492 NPHP1O15259 732 aa28.58■■■□□ 2.17
RAB40C-204ENST00000538492 FAM47AQ5JRC9 791 aa28.58■■■□□ 2.17
RAB40C-204ENST00000538492 SLC51AQ86UW1 340 aa28.58■■■□□ 2.17
RAB40C-204ENST00000538492 MAP7D2Q96T17 732 aa28.58■■■□□ 2.17
RAB40C-204ENST00000538492 MYL5Q02045 173 aa28.57■■■□□ 2.16
RAB40C-204ENST00000538492 EARS2Q5JPH6 523 aaKnown RBP28.57■■■□□ 2.16
RAB40C-204ENST00000538492 ANKRD2Q9GZV1 360 aa28.57■■■□□ 2.16
RAB40C-204ENST00000538492 CCNL1Q9UK58 526 aaPredicted RBP28.57■■■□□ 2.16
RAB40C-204ENST00000538492 FGRP09769 529 aa28.57■■■□□ 2.16
RAB40C-204ENST00000538492 CYP2D6P10635 497 aa28.57■■■□□ 2.16
RAB40C-204ENST00000538492 XBP1P17861 261 aa28.57■■■□□ 2.16
RAB40C-204ENST00000538492 BMP6P22004 513 aa28.57■■■□□ 2.16
RAB40C-204ENST00000538492 MDM2Q00987 491 aaPredicted RBP28.57■■■□□ 2.16
RAB40C-204ENST00000538492 RC3H1Q5TC82 1133 aaKnown RBP28.57■■■□□ 2.16
RAB40C-204ENST00000538492 OLFM4Q6UX06 510 aa28.57■■■□□ 2.16
RAB40C-204ENST00000538492 USP49Q70CQ1 688 aa28.57■■■□□ 2.16
RAB40C-204ENST00000538492 ZNF592Q92610 1267 aa28.57■■■□□ 2.16
RAB40C-204ENST00000538492 CRNKL1Q9BZJ0 848 aaKnown RBP28.57■■■□□ 2.16
RAB40C-204ENST00000538492 SERTAD1Q9UHV2 236 aa28.57■■■□□ 2.16
RAB40C-204ENST00000538492 BAZ2BQ9UIF8 2168 aaKnown RBP28.57■■■□□ 2.16
RAB40C-204ENST00000538492 ARMCX5Q6P1M9 558 aa28.56■■■□□ 2.16
RAB40C-204ENST00000538492 RTCBQ9Y3I0 505 aaKnown RBP28.56■■■□□ 2.16
RAB40C-204ENST00000538492 PRPF3O43395 683 aaKnown RBP28.56■■■□□ 2.16
RAB40C-204ENST00000538492 TOM1O60784 492 aa28.56■■■□□ 2.16
RAB40C-204ENST00000538492 PRR29P0C7W0 189 aa28.56■■■□□ 2.16
RAB40C-204ENST00000538492 GRAMD1CQ8IYS0 662 aa28.56■■■□□ 2.16
RAB40C-204ENST00000538492 ARHGEF1Q92888 912 aaKnown RBP28.56■■■□□ 2.16
RAB40C-204ENST00000538492 PHF20Q9BVI0 1012 aa28.56■■■□□ 2.16
RAB40C-204ENST00000538492 CSRNP2Q9H175 543 aa28.56■■■□□ 2.16
RAB40C-204ENST00000538492 SRPRBQ9Y5M8 271 aaKnown RBP28.56■■■□□ 2.16
RAB40C-204ENST00000538492 BTAF1O14981 1849 aa28.55■■■□□ 2.16
RAB40C-204ENST00000538492 PDE4BQ07343 736 aa28.55■■■□□ 2.16
RAB40C-204ENST00000538492 POSTNQ15063 836 aa28.55■■■□□ 2.16
RAB40C-204ENST00000538492 CEP131Q9UPN4 1083 aa28.55■■■□□ 2.16
RAB40C-204ENST00000538492 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.55■■■□□ 2.164e-6■■■□□ 15.8
RAB40C-204ENST00000538492 RGL2O15211 777 aa28.55■■■□□ 2.16
RAB40C-204ENST00000538492 KRT2P35908 639 aa28.55■■■□□ 2.16
RAB40C-204ENST00000538492 DPF2Q92785 391 aa28.55■■■□□ 2.16
RAB40C-204ENST00000538492 RBM28Q9NW13 759 aaKnown RBP28.55■■■□□ 2.16
RAB40C-204ENST00000538492 SERPINC1P01008 464 aa28.54■■■□□ 2.16
RAB40C-204ENST00000538492 PCP11498 1178 aaKnown RBP28.54■■■□□ 2.16
RAB40C-204ENST00000538492 TM4SF1P30408 202 aa28.54■■■□□ 2.16
RAB40C-204ENST00000538492 CEP135Q66GS9 1140 aa28.54■■■□□ 2.16
RAB40C-204ENST00000538492 FANCLQ9NW38 375 aa28.54■■■□□ 2.16
RAB40C-204ENST00000538492 HOOK1Q9UJC3 728 aaKnown RBP28.54■■■□□ 2.16
RAB40C-204ENST00000538492 TRIM75PA6NK02 468 aa28.53■■■□□ 2.16
RAB40C-204ENST00000538492 UBASH3AP57075 661 aa28.53■■■□□ 2.16
RAB40C-204ENST00000538492 HSP90AA4PQ58FG1 418 aa28.53■■■□□ 2.16
RAB40C-204ENST00000538492 MTERF4Q7Z6M4 381 aaKnown RBP28.53■■■□□ 2.16
RAB40C-204ENST00000538492 MAN1B1Q9UKM7 699 aa28.53■■■□□ 2.16
RAB40C-204ENST00000538492 COL24A1Q17RW2 1714 aa28.52■■■□□ 2.16
RAB40C-204ENST00000538492 CALM1P0DP23 149 aa28.52■■■□□ 2.16
RAB40C-204ENST00000538492 CALM2P0DP24 149 aa28.52■■■□□ 2.16
RAB40C-204ENST00000538492 CALM3P0DP25 149 aa28.52■■■□□ 2.16
RAB40C-204ENST00000538492 SFPQP23246 707 aaKnown RBP eCLIP28.52■■■□□ 2.16
RAB40C-204ENST00000538492 NOM1Q5C9Z4 860 aaKnown RBP28.52■■■□□ 2.16
RAB40C-204ENST00000538492 TMTC3Q6ZXV5 915 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms