RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 FGFR3P22607 806 aa11.77□□□□□ -0.53
CD9-207ENST00000538418 EPHB1P54762 984 aa11.77□□□□□ -0.53
CD9-207ENST00000538418 SLC7A5Q01650 507 aa11.77□□□□□ -0.53
CD9-207ENST00000538418 INPP5AQ14642 412 aa11.77□□□□□ -0.53
CD9-207ENST00000538418 NFE2Q16621 373 aaPredicted RBP11.77□□□□□ -0.53
CD9-207ENST00000538418 CDCP2Q5VXM1 449 aa11.77□□□□□ -0.53
CD9-207ENST00000538418 FAM35AQ86V20 835 aa11.77□□□□□ -0.53
CD9-207ENST00000538418 PLPPR2Q96GM1 343 aa11.77□□□□□ -0.53
CD9-207ENST00000538418 EXOC2Q96KP1 924 aa11.77□□□□□ -0.53
CD9-207ENST00000538418 RUSC1Q9BVN2 902 aa11.77□□□□□ -0.53
CD9-207ENST00000538418 SH2B1Q9NRF2 756 aaPredicted RBP11.77□□□□□ -0.53
CD9-207ENST00000538418 SHROOM2Q13796 1616 aa11.76□□□□□ -0.53
CD9-207ENST00000538418 AGRPO00253 132 aa11.76□□□□□ -0.53
CD9-207ENST00000538418 MAN1A2O60476 641 aa11.76□□□□□ -0.53
CD9-207ENST00000538418 RAPGEF3O95398 923 aa11.76□□□□□ -0.53
CD9-207ENST00000538418 TTF1Q15361 905 aaPredicted RBP11.76□□□□□ -0.53
CD9-207ENST00000538418 WWC2Q6AWC2 1192 aa11.76□□□□□ -0.53
CD9-207ENST00000538418 LRFN4Q6PJG9 635 aa11.76□□□□□ -0.53
CD9-207ENST00000538418 WDR75Q8IWA0 830 aaKnown RBP11.76□□□□□ -0.53
CD9-207ENST00000538418 DHRS4Q9BTZ2 278 aa11.76□□□□□ -0.53
CD9-207ENST00000538418 ZC3H12CQ9C0D7 883 aaKnown RBP11.76□□□□□ -0.53
CD9-207ENST00000538418 TRIM33Q9UPN9 1127 aa11.76□□□□□ -0.53
CD9-207ENST00000538418 FAM86C2PA6NEL3 165 aa11.75□□□□□ -0.53
CD9-207ENST00000538418 SOX1O00570 391 aaPredicted RBP11.75□□□□□ -0.53
CD9-207ENST00000538418 DNAJA2O60884 412 aa11.75□□□□□ -0.53
CD9-207ENST00000538418 AVPP01185 164 aa11.75□□□□□ -0.53
CD9-207ENST00000538418 CABP4P57796 275 aa11.75□□□□□ -0.53
CD9-207ENST00000538418 PTSQ03393 145 aa11.75□□□□□ -0.53
CD9-207ENST00000538418 GNPTABQ3T906 1256 aa11.75□□□□□ -0.53
CD9-207ENST00000538418 HDXQ7Z353 690 aa11.75□□□□□ -0.53
CD9-207ENST00000538418 SYT9Q86SS6 491 aa11.75□□□□□ -0.53
CD9-207ENST00000538418 SMC5Q8IY18 1101 aa11.75□□□□□ -0.53
CD9-207ENST00000538418 AFAP1L2Q8N4X5 818 aa11.75□□□□□ -0.53
CD9-207ENST00000538418 ATL2Q8NHH9 583 aa11.75□□□□□ -0.53
CD9-207ENST00000538418 PCGF6Q9BYE7 350 aa11.75□□□□□ -0.53
CD9-207ENST00000538418 TACC3Q9Y6A5 838 aa11.75□□□□□ -0.53
CD9-207ENST00000538418 CCNFP41002 786 aa11.74□□□□□ -0.53
CD9-207ENST00000538418 PDE4BQ07343 736 aa11.74□□□□□ -0.53
CD9-207ENST00000538418 TMEM201Q5SNT2 666 aa11.74□□□□□ -0.53
CD9-207ENST00000538418 AXDND1Q5T1B0 1012 aaPredicted RBP11.74□□□□□ -0.53
CD9-207ENST00000538418 GMCL1Q96IK5 515 aa11.74□□□□□ -0.53
CD9-207ENST00000538418 CLUHP3Q96NS8 147 aa11.74□□□□□ -0.53
CD9-207ENST00000538418 CDC6Q99741 560 aa11.74□□□□□ -0.53
CD9-207ENST00000538418 SMG9Q9H0W8 520 aaKnown RBP11.74□□□□□ -0.53
CD9-207ENST00000538418 ZNF214Q9UL59 606 aaPredicted RBP11.74□□□□□ -0.53
CD9-207ENST00000538418 PHF24Q9UPV7 400 aa11.74□□□□□ -0.53
CD9-207ENST00000538418 MRPS23Q9Y3D9 190 aaKnown RBP11.74□□□□□ -0.53
CD9-207ENST00000538418 IGF1RP08069 1367 aa11.74□□□□□ -0.53
CD9-207ENST00000538418 KIF3BO15066 747 aa11.73□□□□□ -0.53
CD9-207ENST00000538418 GUCY2FP51841 1108 aa11.73□□□□□ -0.53
CD9-207ENST00000538418 RHBDL3P58872 404 aa11.73□□□□□ -0.53
CD9-207ENST00000538418 FAM209AQ5JX71 171 aa11.73□□□□□ -0.53
CD9-207ENST00000538418 ELMSAN1Q6PJG2 1045 aa11.73□□□□□ -0.53
CD9-207ENST00000538418 IPO9Q96P70 1041 aaKnown RBP11.73□□□□□ -0.53
CD9-207ENST00000538418 TARS2Q9BW92 718 aaKnown RBP11.73□□□□□ -0.53
CD9-207ENST00000538418 SOX17Q9H6I2 414 aaPredicted RBP11.73□□□□□ -0.53
CD9-207ENST00000538418 ERCC6L2Q5T890 1561 aa11.72□□□□□ -0.53
CD9-207ENST00000538418 DNAJC25-GNG10A0A024R161 153 aa11.72□□□□□ -0.53
CD9-207ENST00000538418 A0A1W2PQU0 124 aa11.72□□□□□ -0.53
CD9-207ENST00000538418 TSPAN6O43657 245 aa11.72□□□□□ -0.53
CD9-207ENST00000538418 EIF3JO75822 258 aaKnown RBP11.72□□□□□ -0.53
CD9-207ENST00000538418 EPHA1P21709 976 aa11.72□□□□□ -0.53
CD9-207ENST00000538418 CDC27P30260 824 aa11.72□□□□□ -0.53
CD9-207ENST00000538418 GSTM4Q03013 218 aa11.72□□□□□ -0.53
CD9-207ENST00000538418 SV2CQ496J9 727 aa11.72□□□□□ -0.53
CD9-207ENST00000538418 CCSAPQ6IQ19 270 aaPredicted RBP11.72□□□□□ -0.53
CD9-207ENST00000538418 ARHGEF4Q9NR80 690 aa11.72□□□□□ -0.53
CD9-207ENST00000538418 KRT82Q9NSB4 513 aa11.72□□□□□ -0.53
CD9-207ENST00000538418 KIAA0586Q9BVV6 1533 aa11.71□□□□□ -0.53
CD9-207ENST00000538418 KIF27Q86VH2 1401 aa11.71□□□□□ -0.53
CD9-207ENST00000538418 TTBK1Q5TCY1 1321 aaPredicted RBP11.71□□□□□ -0.53
CD9-207ENST00000538418 SIN3BO75182 1162 aa11.71□□□□□ -0.53
CD9-207ENST00000538418 CTBSQ01459 385 aa11.71□□□□□ -0.53
CD9-207ENST00000538418 PPP2R5AQ15172 486 aa11.71□□□□□ -0.53
CD9-207ENST00000538418 CNNM4Q6P4Q7 775 aa11.71□□□□□ -0.53
CD9-207ENST00000538418 LRRTM3Q86VH5 581 aa11.71□□□□□ -0.53
CD9-207ENST00000538418 GTPBP3Q969Y2 492 aaKnown RBP11.71□□□□□ -0.53
CD9-207ENST00000538418 ELMO3Q96BJ8 720 aa11.71□□□□□ -0.53
CD9-207ENST00000538418 ZNF837Q96EG3 531 aaPredicted RBP11.71□□□□□ -0.53
CD9-207ENST00000538418 INTS7Q9NVH2 962 aaKnown RBP11.71□□□□□ -0.53
CD9-207ENST00000538418 KLHL3Q9UH77 587 aa11.71□□□□□ -0.53
CD9-207ENST00000538418 SLC6A14Q9UN76 642 aa11.71□□□□□ -0.53
CD9-207ENST00000538418 TRBV23-1A0A0A0MS06 115 aa11.7□□□□□ -0.54
CD9-207ENST00000538418 TRAV20A0A0B4J274 112 aa11.7□□□□□ -0.54
CD9-207ENST00000538418 H3BRJ5 948 aa11.7□□□□□ -0.54
CD9-207ENST00000538418 CPEP16870 476 aa11.7□□□□□ -0.54
CD9-207ENST00000538418 ZNF143P52747 638 aaPredicted RBP11.7□□□□□ -0.54
CD9-207ENST00000538418 ZNF468Q5VIY5 522 aaPredicted RBP11.7□□□□□ -0.54
CD9-207ENST00000538418 CYFIP1Q7L576 1253 aa11.7□□□□□ -0.54
CD9-207ENST00000538418 RIN3Q8TB24 985 aa11.7□□□□□ -0.54
CD9-207ENST00000538418 LPIN3Q9BQK8 851 aa11.7□□□□□ -0.54
CD9-207ENST00000538418 MRPL4Q9BYD3 311 aaKnown RBP11.7□□□□□ -0.54
CD9-207ENST00000538418 NAGPAQ9UK23 515 aa11.7□□□□□ -0.54
CD9-207ENST00000538418 EIF4EBP3O60516 100 aaPredicted RBP11.69□□□□□ -0.54
CD9-207ENST00000538418 RASGRP1O95267 797 aa11.69□□□□□ -0.54
CD9-207ENST00000538418 CYP11A1P05108 521 aa11.69□□□□□ -0.54
CD9-207ENST00000538418 BIRC2Q13490 618 aa11.69□□□□□ -0.54
CD9-207ENST00000538418 HSP90AA2PQ14568 343 aaPredicted RBP11.69□□□□□ -0.54
CD9-207ENST00000538418 SPNS2Q8IVW8 549 aa11.69□□□□□ -0.54
CD9-207ENST00000538418 CCDC155Q8N6L0 562 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms