RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 TTC12Q9H892 705 aaPredicted RBP18.07■□□□□ 0.48
MKS1-204ENST00000537529 KIAA1468Q9P260 1216 aa18.07■□□□□ 0.48
MKS1-204ENST00000537529 BECN2A8MW95 431 aa18.07■□□□□ 0.48
MKS1-204ENST00000537529 SERPINB2P05120 415 aa18.07■□□□□ 0.48
MKS1-204ENST00000537529 RILPL1Q5EBL4 403 aa18.07■□□□□ 0.48
MKS1-204ENST00000537529 SPC24Q8NBT2 197 aa18.07■□□□□ 0.48
MKS1-204ENST00000537529 QTRT2Q9H974 415 aaKnown RBP18.07■□□□□ 0.48
MKS1-204ENST00000537529 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.06■□□□□ 0.48
MKS1-204ENST00000537529 FAM237AA0A1B0GTK4 181 aa18.06■□□□□ 0.48
MKS1-204ENST00000537529 ATP2B4P23634 1241 aa18.06■□□□□ 0.48
MKS1-204ENST00000537529 SYKP43405 635 aa18.06■□□□□ 0.48
MKS1-204ENST00000537529 RESP18Q5W5W9 173 aa18.06■□□□□ 0.48
MKS1-204ENST00000537529 SARM1Q6SZW1 724 aa18.06■□□□□ 0.48
MKS1-204ENST00000537529 ZNF830Q96NB3 372 aaPredicted RBP18.06■□□□□ 0.48
MKS1-204ENST00000537529 NOL10Q9BSC4 688 aaKnown RBP18.06■□□□□ 0.48
MKS1-204ENST00000537529 HPSEQ9Y251 543 aa18.06■□□□□ 0.48
MKS1-204ENST00000537529 PRPF3O43395 683 aaKnown RBP18.05■□□□□ 0.48
MKS1-204ENST00000537529 CYP2D6P10635 497 aa18.05■□□□□ 0.48
MKS1-204ENST00000537529 GPSM2P81274 684 aa18.05■□□□□ 0.48
MKS1-204ENST00000537529 PIBF1Q8WXW3 757 aa18.05■□□□□ 0.48
MKS1-204ENST00000537529 MCM9Q9NXL9 1143 aa18.05■□□□□ 0.48
MKS1-204ENST00000537529 UFL1O94874 794 aa18.05■□□□□ 0.48
MKS1-204ENST00000537529 BAG3O95817 575 aa18.05■□□□□ 0.48
MKS1-204ENST00000537529 LDHCP07864 332 aa18.05■□□□□ 0.48
MKS1-204ENST00000537529 HMGB2P26583 209 aaKnown RBP18.05■□□□□ 0.48
MKS1-204ENST00000537529 CDC25BP30305 580 aa18.05■□□□□ 0.48
MKS1-204ENST00000537529 USP5P45974 858 aa18.05■□□□□ 0.48
MKS1-204ENST00000537529 TROAPQ12815 778 aa18.05■□□□□ 0.48
MKS1-204ENST00000537529 SHC4Q6S5L8 630 aa18.05■□□□□ 0.48
MKS1-204ENST00000537529 KRI1Q8N9T8 703 aaKnown RBP18.05■□□□□ 0.48
MKS1-204ENST00000537529 FUT2Q10981 343 aa18.04■□□□□ 0.48
MKS1-204ENST00000537529 CERS3Q8IU89 383 aa18.04■□□□□ 0.48
MKS1-204ENST00000537529 DHX40Q8IX18 779 aaKnown RBP18.04■□□□□ 0.48
MKS1-204ENST00000537529 AMOTL1Q8IY63 956 aa18.04■□□□□ 0.48
MKS1-204ENST00000537529 DRC7Q8IY82 874 aa18.04■□□□□ 0.48
MKS1-204ENST00000537529 CTCFLQ8NI51 663 aaPredicted RBP18.04■□□□□ 0.48
MKS1-204ENST00000537529 GGA1Q9UJY5 639 aa18.04■□□□□ 0.48
MKS1-204ENST00000537529 CEP131Q9UPN4 1083 aa18.04■□□□□ 0.48
MKS1-204ENST00000537529 RBM6P78332 1123 aaKnown RBP18.03■□□□□ 0.48
MKS1-204ENST00000537529 TMTC3Q6ZXV5 915 aa18.03■□□□□ 0.48
MKS1-204ENST00000537529 SLC51AQ86UW1 340 aa18.03■□□□□ 0.48
MKS1-204ENST00000537529 ERCC4Q92889 916 aaPredicted RBP18.03■□□□□ 0.48
MKS1-204ENST00000537529 MYH2Q9UKX2 1941 aa18.03■□□□□ 0.48
MKS1-204ENST00000537529 TSPY2A6NKD2 308 aa18.03■□□□□ 0.48
MKS1-204ENST00000537529 BBOX1O75936 387 aa18.03■□□□□ 0.48
MKS1-204ENST00000537529 PLEKHA8P1O95397 391 aa18.03■□□□□ 0.48
MKS1-204ENST00000537529 TOB1P50616 345 aaPredicted RBP18.03■□□□□ 0.48
MKS1-204ENST00000537529 EVX2Q03828 476 aa18.03■□□□□ 0.48
MKS1-204ENST00000537529 FAM47AQ5JRC9 791 aa18.03■□□□□ 0.48
MKS1-204ENST00000537529 KRT27Q7Z3Y8 459 aa18.03■□□□□ 0.48
MKS1-204ENST00000537529 BPIFA3Q9BQP9 254 aa18.03■□□□□ 0.48
MKS1-204ENST00000537529 ROBO3Q96MS0 1386 aa18.03■□□□□ 0.48
MKS1-204ENST00000537529 KRT2P35908 639 aa18.02■□□□□ 0.48
MKS1-204ENST00000537529 NLRP12P59046 1061 aa18.02■□□□□ 0.48
MKS1-204ENST00000537529 PPP4CP60510 307 aa18.02■□□□□ 0.48
MKS1-204ENST00000537529 NR5A1Q13285 461 aa18.02■□□□□ 0.48
MKS1-204ENST00000537529 PKN1Q16512 942 aa18.02■□□□□ 0.48
MKS1-204ENST00000537529 C12orf60Q5U649 245 aa18.02■□□□□ 0.48
MKS1-204ENST00000537529 AOPEPQ8N6M6 819 aa18.02■□□□□ 0.48
MKS1-204ENST00000537529 SH3RF3Q8TEJ3 882 aaPredicted RBP18.02■□□□□ 0.48
MKS1-204ENST00000537529 BRMS1Q9HCU9 246 aa18.02■□□□□ 0.48
MKS1-204ENST00000537529 MKRN1Q9UHC7 482 aaKnown RBP18.02■□□□□ 0.48
MKS1-204ENST00000537529 USP17L8P0C7I0 530 aa18.02■□□□□ 0.47
MKS1-204ENST00000537529 HOXA10P31260 410 aaPredicted RBP18.02■□□□□ 0.47
MKS1-204ENST00000537529 CLIC6Q96NY7 704 aa18.02■□□□□ 0.47
MKS1-204ENST00000537529 GPR101Q96P66 508 aaPredicted RBP18.02■□□□□ 0.47
MKS1-204ENST00000537529 PHF20Q9BVI0 1012 aa18.02■□□□□ 0.47
MKS1-204ENST00000537529 VPS54Q9P1Q0 977 aa18.02■□□□□ 0.47
MKS1-204ENST00000537529 V9GY48 417 aaPredicted RBP18.02■□□□□ 0.47
MKS1-204ENST00000537529 CNTNAP5Q8WYK1 1306 aa18.01■□□□□ 0.47
MKS1-204ENST00000537529 A0A087WWV3 80 aa18.01■□□□□ 0.47
MKS1-204ENST00000537529 IL1R1P14778 569 aa18.01■□□□□ 0.47
MKS1-204ENST00000537529 OXER1Q8TDS5 423 aa18.01■□□□□ 0.47
MKS1-204ENST00000537529 MRFAP1L1Q96HT8 127 aa18.01■□□□□ 0.47
MKS1-204ENST00000537529 CRAMP1Q96RY5 1269 aa18.01■□□□□ 0.47
MKS1-204ENST00000537529 KCNF1Q9H3M0 494 aa18.01■□□□□ 0.47
MKS1-204ENST00000537529 CD209Q9NNX6 404 aa18.01■□□□□ 0.47
MKS1-204ENST00000537529 FAM13BQ9NYF5 915 aa18.01■□□□□ 0.47
MKS1-204ENST00000537529 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.01■□□□□ 0.47
MKS1-204ENST00000537529 CLIP2Q9UDT6 1046 aa18.01■□□□□ 0.47
MKS1-204ENST00000537529 NMT2O60551 498 aa18■□□□□ 0.47
MKS1-204ENST00000537529 TRIM37O94972 964 aa18■□□□□ 0.47
MKS1-204ENST00000537529 PTGS1P23219 599 aa18■□□□□ 0.47
MKS1-204ENST00000537529 TERF1P54274 439 aa18■□□□□ 0.47
MKS1-204ENST00000537529 DDR1Q08345 913 aa18■□□□□ 0.47
MKS1-204ENST00000537529 DIXDC1Q155Q3 683 aa18■□□□□ 0.47
MKS1-204ENST00000537529 DPCR1Q3MIW9 517 aa18■□□□□ 0.47
MKS1-204ENST00000537529 CCDC178Q5BJE1 867 aa18■□□□□ 0.47
MKS1-204ENST00000537529 FBXW7Q969H0 707 aa18■□□□□ 0.47
MKS1-204ENST00000537529 PODXL2Q9NZ53 605 aa18■□□□□ 0.47
MKS1-204ENST00000537529 FBXO2Q9UK22 296 aaPredicted RBP18■□□□□ 0.47
MKS1-204ENST00000537529 KCNH3Q9ULD8 1083 aa18■□□□□ 0.47
MKS1-204ENST00000537529 POLRMTO00411 1230 aaKnown RBP18■□□□□ 0.47
MKS1-204ENST00000537529 PTPREP23469 700 aa18■□□□□ 0.47
MKS1-204ENST00000537529 KIF5BP33176 963 aa18■□□□□ 0.47
MKS1-204ENST00000537529 NOLC1Q14978 699 aaKnown RBP eCLIP18■□□□□ 0.47
MKS1-204ENST00000537529 TMC4Q7Z404 712 aa18■□□□□ 0.47
MKS1-204ENST00000537529 MORC2Q9Y6X9 1032 aaPredicted RBP18■□□□□ 0.47
MKS1-204ENST00000537529 TPM2P07951 284 aa17.99■□□□□ 0.47
MKS1-204ENST00000537529 TPM4P67936 248 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms