RNA–Protein interactions for RNA: ENST00000536393.5

USP30-208, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-208ENST00000536393 URI1O94763 535 aaPredicted RBP7.58□□□□□ -1.2
USP30-208ENST00000536393 STARD3NLO95772 234 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 ANXA1P04083 346 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 CDK17Q00537 523 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 MDM2Q00987 491 aaPredicted RBP7.58□□□□□ -1.2
USP30-208ENST00000536393 MAP3K12Q12852 859 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 NTRK3Q16288 839 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 ERCC6LQ2NKX8 1250 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 KRT40Q6A162 431 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 GALNT17Q6IS24 598 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 KIF6Q6ZMV9 814 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 TMEM139Q8IV31 216 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.58□□□□□ -1.2
USP30-208ENST00000536393 LPIN2Q92539 896 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 NEUROD6Q96NK8 337 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 LARP6Q9BRS8 491 aaKnown RBP7.58□□□□□ -1.2
USP30-208ENST00000536393 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.58□□□□□ -1.2
USP30-208ENST00000536393 TSGA10Q9BZW7 698 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 HAUS4Q9H6D7 363 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 SLC12A7Q9Y666 1083 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 CLIC4Q9Y696 253 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 ANKRD36CQ5JPF3 1778 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 NWD2Q9ULI1 1742 aa7.58□□□□□ -1.2
USP30-208ENST00000536393 CHD4Q14839 1912 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 AKAP11Q9UKA4 1901 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 CTAGE9A4FU28 777 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 SRRM3A6NNA2 597 aaPredicted RBP7.57□□□□□ -1.2
USP30-208ENST00000536393 USP27XA6NNY8 438 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 PBX1P40424 430 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 CHMP4BP1P59074 171 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 CCT2P78371 535 aaKnown RBP7.57□□□□□ -1.2
USP30-208ENST00000536393 KRT83P78385 493 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 SMC1AQ14683 1233 aaKnown RBP7.57□□□□□ -1.2
USP30-208ENST00000536393 TSR1Q2NL82 804 aaKnown RBP7.57□□□□□ -1.2
USP30-208ENST00000536393 COBLL1Q53SF7 1204 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 TAF7LQ5H9L4 462 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 FIGNQ5HY92 759 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 SHC4Q6S5L8 630 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 CYP26C1Q6V0L0 522 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 GIGYF2Q6Y7W6 1299 aaKnown RBP7.57□□□□□ -1.2
USP30-208ENST00000536393 GBP6Q6ZN66 633 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 SH3RF1Q7Z6J0 888 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 CCDC170Q8IYT3 715 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 TC2NQ8N9U0 490 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 CCDC148Q8NFR7 591 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 IGDCC4Q8TDY8 1250 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 KIFC2Q96AC6 838 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 LRRC59Q96AG4 307 aaKnown RBP7.57□□□□□ -1.2
USP30-208ENST00000536393 XAGE2Q96GT9 111 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 TCEANC2Q96MN5 208 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 TACO1Q9BSH4 297 aaKnown RBP7.57□□□□□ -1.2
USP30-208ENST00000536393 HSD3B7Q9H2F3 369 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 TRMT1Q9NXH9 659 aaKnown RBP7.57□□□□□ -1.2
USP30-208ENST00000536393 RNF14Q9UBS8 474 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 WWC3Q9ULE0 1092 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 NFE2L3Q9Y4A8 694 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 PCDHA5Q9Y5H7 936 aa7.57□□□□□ -1.2
USP30-208ENST00000536393 ATP8B3O60423 1300 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 ANKRD18BA2A2Z9 1011 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 CTAGE15A4D2H0 777 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 GOLGA8AA7E2F4 631 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 H7C1D1 291 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 SLC26A4O43511 780 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 DDAH1O94760 285 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 PDE8BO95263 885 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 TBC1D8O95759 1140 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 CTAGE8P0CG41 777 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 MYL6BP14649 208 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 PRLRP16471 622 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 CALML3P27482 149 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 LMOD1P29536 600 aaPredicted RBP7.56□□□□□ -1.2
USP30-208ENST00000536393 ACTN2P35609 894 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 PLA2G4AP47712 749 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 AARSP49588 968 aaKnown RBP eCLIP7.56□□□□□ -1.2
USP30-208ENST00000536393 ANTXR2P58335 489 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 GNG11P61952 73 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 AKAP17AQ02040 695 aaKnown RBP7.56□□□□□ -1.2
USP30-208ENST00000536393 APBA1Q02410 837 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 STIM1Q13586 685 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 KCNB1Q14721 858 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 PUM3Q15397 648 aaKnown RBP7.56□□□□□ -1.2
USP30-208ENST00000536393 RTN1Q16799 776 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 AKNAD1Q5T1N1 836 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 CDKAL1Q5VV42 579 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 RPAINQ86UA6 219 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 CTAGE6Q86UF2 777 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 METTL16Q86W50 562 aaKnown RBP7.56□□□□□ -1.2
USP30-208ENST00000536393 FAM114A1Q8IWE2 563 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 CTAGE4Q8IX94 777 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 FNBP4Q8N3X1 1017 aaPredicted RBP7.56□□□□□ -1.2
USP30-208ENST00000536393 EIF1ADQ8N9N8 165 aaKnown RBP7.56□□□□□ -1.2
USP30-208ENST00000536393 C1orf131Q8NDD1 294 aaKnown RBP7.56□□□□□ -1.2
USP30-208ENST00000536393 CCDC47Q96A33 483 aaKnown RBP7.56□□□□□ -1.2
USP30-208ENST00000536393 AIDAQ96BJ3 306 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 CDC5LQ99459 802 aaKnown RBP7.56□□□□□ -1.2
USP30-208ENST00000536393 NAPGQ99747 312 aaPredicted RBP7.56□□□□□ -1.2
USP30-208ENST00000536393 CARD10Q9BWT7 1032 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 LY9Q9HBG7 655 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 SH3GLB2Q9NR46 395 aa7.56□□□□□ -1.2
USP30-208ENST00000536393 ZNF446Q9NWS9 450 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms