RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 COQ9O75208 318 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 MYL6BP14649 208 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 FBLN1P23142 703 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 SFPQP23246 707 aaKnown RBP eCLIP4.25□□□□□ -1.73
MCF2-210ENST00000536274 CALRP27797 417 aaKnown RBP4.25□□□□□ -1.73
MCF2-210ENST00000536274 LMOD1P29536 600 aaPredicted RBP4.25□□□□□ -1.73
MCF2-210ENST00000536274 CNGA1P29973 690 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 GBP2P32456 591 aaPredicted RBP4.25□□□□□ -1.73
MCF2-210ENST00000536274 HSP90B2PQ58FF3 399 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 TYW1BQ6NUM6 668 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 KIAA0825Q8IV33 1275 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 TBC1D5Q92609 795 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 CCDC97Q96F63 343 aaPredicted RBP4.25□□□□□ -1.73
MCF2-210ENST00000536274 SPATA32Q96LK8 384 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 ESYT1Q9BSJ8 1104 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 RMI1Q9H9A7 625 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 LZTFL1Q9NQ48 299 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 KLC4Q9NSK0 619 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 SPG7Q9UQ90 795 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 DLEC1Q9Y238 1755 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 NRDCO43847 1150 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 HMMRO75330 724 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 YY1P25490 414 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 TXLNAP40222 546 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 ATP1A2P50993 1020 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 IRAK1P51617 712 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 FAM160A1Q05DH4 1040 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 CCDC96Q2M329 555 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 ADCK5Q3MIX3 580 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 GNPTABQ3T906 1256 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 CEP85LQ5SZL2 805 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 HHATQ5VTY9 493 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 HDXQ7Z353 690 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 DEFB132Q7Z7B7 95 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 RPUSD2Q8IZ73 545 aaKnown RBP4.25□□□□□ -1.73
MCF2-210ENST00000536274 NOA1Q8NC60 698 aaKnown RBP4.25□□□□□ -1.73
MCF2-210ENST00000536274 CCDC12Q8WUD4 166 aaPredicted RBP4.25□□□□□ -1.73
MCF2-210ENST00000536274 INTS4Q96HW7 963 aaKnown RBP4.25□□□□□ -1.73
MCF2-210ENST00000536274 MTRQ99707 1265 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 FAM167BQ9BTA0 163 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 PIDD1Q9HB75 910 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 LNPEPQ9UIQ6 1025 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 L1RE1Q9UN81 338 aa4.25□□□□□ -1.73
MCF2-210ENST00000536274 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.24□□□□□ -1.73
MCF2-210ENST00000536274 CHUKO15111 745 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 PAX3P23760 479 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 GGCXP38435 758 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 MLLT3P42568 568 aaPredicted RBP4.24□□□□□ -1.73
MCF2-210ENST00000536274 GNGT1P63211 74 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 IRF5Q13568 498 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 LONRF3Q496Y0 759 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 EDC4Q6P2E9 1401 aaKnown RBP4.24□□□□□ -1.73
MCF2-210ENST00000536274 UBR3Q6ZT12 1888 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 GPIHBP1Q8IV16 184 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 PDILTQ8N807 584 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 TSGA10Q9BZW7 698 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 GOLPH3LQ9H4A5 285 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 CLSTN2Q9H4D0 955 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 PRDM11Q9NQV5 511 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 MAP2P11137 1827 aaKnown RBP4.24□□□□□ -1.73
MCF2-210ENST00000536274 COL5A3P25940 1745 aaPredicted RBP4.24□□□□□ -1.73
MCF2-210ENST00000536274 TOGARAM1Q9Y4F4 1720 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 ARFGEF2Q9Y6D5 1785 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 GPR37O15354 613 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 FUT4P22083 530 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 ZBED6P86452 979 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 PDCLQ13371 301 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 CRYMQ14894 314 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 LARP1BQ659C4 914 aaKnown RBP4.24□□□□□ -1.73
MCF2-210ENST00000536274 WAPLQ7Z5K2 1190 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 GOLGA1Q92805 767 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 SMARCC1Q92922 1105 aaPredicted RBP4.24□□□□□ -1.73
MCF2-210ENST00000536274 NLRP3Q96P20 1036 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 SLC39A2Q9NP94 309 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 HAUS2Q9NVX0 235 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 MAPK8IP1Q9UQF2 711 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 PXDNLA1KZ92 1463 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 WDR90Q96KV7 1748 aa4.24□□□□□ -1.73
MCF2-210ENST00000536274 ATP8B1O43520 1251 aa4.23□□□□□ -1.73
MCF2-210ENST00000536274 PECAM1P16284 738 aaPredicted RBP4.23□□□□□ -1.73
MCF2-210ENST00000536274 USP8P40818 1118 aa4.23□□□□□ -1.73
MCF2-210ENST00000536274 ADKP55263 362 aaKnown RBP4.23□□□□□ -1.73
MCF2-210ENST00000536274 RWDD2BP57060 319 aa4.23□□□□□ -1.73
MCF2-210ENST00000536274 CHMP4BP1P59074 171 aa4.23□□□□□ -1.73
MCF2-210ENST00000536274 AKAP17AQ02040 695 aaKnown RBP4.23□□□□□ -1.73
MCF2-210ENST00000536274 FAM98CQ17RN3 349 aaKnown RBP4.23□□□□□ -1.73
MCF2-210ENST00000536274 DPCR1Q3MIW9 517 aa4.23□□□□□ -1.73
MCF2-210ENST00000536274 KCTD16Q68DU8 428 aa4.23□□□□□ -1.73
MCF2-210ENST00000536274 SH2D3CQ8N5H7 860 aa4.23□□□□□ -1.73
MCF2-210ENST00000536274 RETREG2Q8NC44 543 aa4.23□□□□□ -1.73
MCF2-210ENST00000536274 ACRBPQ8NEB7 543 aa4.23□□□□□ -1.73
MCF2-210ENST00000536274 LEO1Q8WVC0 666 aaPredicted RBP4.23□□□□□ -1.73
MCF2-210ENST00000536274 ZDHHC16Q969W1 377 aa4.23□□□□□ -1.73
MCF2-210ENST00000536274 STAMBPL1Q96FJ0 436 aa4.23□□□□□ -1.73
MCF2-210ENST00000536274 MAF1Q9H063 256 aa4.23□□□□□ -1.73
MCF2-210ENST00000536274 SLC40A1Q9NP59 571 aa4.23□□□□□ -1.73
MCF2-210ENST00000536274 FANCLQ9NW38 375 aa4.23□□□□□ -1.73
MCF2-210ENST00000536274 L3MBTL1Q9Y468 752 aa4.23□□□□□ -1.73
MCF2-210ENST00000536274 ARIH1Q9Y4X5 557 aaPredicted RBP4.23□□□□□ -1.73
MCF2-210ENST00000536274 EVC2Q86UK5 1308 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms