RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 CAP2P40123 477 aa18.44■□□□□ 0.54
CNN1-202ENST00000535659 MAP3K9P80192 1104 aa18.44■□□□□ 0.54
CNN1-202ENST00000535659 KRT32Q14532 448 aa18.44■□□□□ 0.54
CNN1-202ENST00000535659 RRP12Q5JTH9 1297 aaKnown RBP18.44■□□□□ 0.54
CNN1-202ENST00000535659 STOX1Q6ZVD7 989 aa18.44■□□□□ 0.54
CNN1-202ENST00000535659 MOB2Q70IA6 237 aa18.44■□□□□ 0.54
CNN1-202ENST00000535659 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.44■□□□□ 0.54
CNN1-202ENST00000535659 WRNIP1Q96S55 665 aa18.44■□□□□ 0.54
CNN1-202ENST00000535659 C22orf23Q9BZE7 217 aa18.44■□□□□ 0.54
CNN1-202ENST00000535659 KRT23Q9C075 422 aa18.44■□□□□ 0.54
CNN1-202ENST00000535659 RANBP6O60518 1105 aaKnown RBP18.43■□□□□ 0.54
CNN1-202ENST00000535659 NT5C2P49902 561 aa18.43■□□□□ 0.54
CNN1-202ENST00000535659 NCOA7Q8NI08 942 aa18.43■□□□□ 0.54
CNN1-202ENST00000535659 ESR2Q92731 530 aa18.43■□□□□ 0.54
CNN1-202ENST00000535659 NEDD4P46934 1319 aa18.42■□□□□ 0.54
CNN1-202ENST00000535659 UNCXA6NJT0 531 aa18.42■□□□□ 0.54
CNN1-202ENST00000535659 UBE2Q2LH0YL09 131 aa18.42■□□□□ 0.54
CNN1-202ENST00000535659 INPP5BP32019 993 aa18.42■□□□□ 0.54
CNN1-202ENST00000535659 ANAPC15P60006 121 aa18.42■□□□□ 0.54
CNN1-202ENST00000535659 TFAP4Q01664 338 aa18.42■□□□□ 0.54
CNN1-202ENST00000535659 ABCB5Q2M3G0 1257 aa18.42■□□□□ 0.54
CNN1-202ENST00000535659 LDLRAD1Q5T700 205 aa18.42■□□□□ 0.54
CNN1-202ENST00000535659 ZKSCAN4Q969J2 545 aaPredicted RBP18.42■□□□□ 0.54
CNN1-202ENST00000535659 CABP5Q9NP86 173 aa18.42■□□□□ 0.54
CNN1-202ENST00000535659 B4E1Z4 1266 aa18.41■□□□□ 0.54
CNN1-202ENST00000535659 AKR1B1P15121 316 aa18.41■□□□□ 0.54
CNN1-202ENST00000535659 RBM25P49756 843 aaKnown RBP18.41■□□□□ 0.54
CNN1-202ENST00000535659 JAG1P78504 1218 aa18.41■□□□□ 0.54
CNN1-202ENST00000535659 ADCK5Q3MIX3 580 aa18.41■□□□□ 0.54
CNN1-202ENST00000535659 FAM47AQ5JRC9 791 aa18.41■□□□□ 0.54
CNN1-202ENST00000535659 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.41■□□□□ 0.54
CNN1-202ENST00000535659 RALYLQ86SE5 291 aaKnown RBP18.41■□□□□ 0.54
CNN1-202ENST00000535659 ANKRD13AQ8IZ07 590 aa18.41■□□□□ 0.54
CNN1-202ENST00000535659 NEK1Q96PY6 1258 aa18.41■□□□□ 0.54
CNN1-202ENST00000535659 GINM1Q9NU53 330 aa18.41■□□□□ 0.54
CNN1-202ENST00000535659 ZSWIM5Q9P217 1185 aa18.41■□□□□ 0.54
CNN1-202ENST00000535659 TSPY2A6NKD2 308 aa18.4■□□□□ 0.54
CNN1-202ENST00000535659 MPHOSPH10O00566 681 aaKnown RBP18.4■□□□□ 0.54
CNN1-202ENST00000535659 KDM4AO75164 1064 aa18.4■□□□□ 0.54
CNN1-202ENST00000535659 GDF11O95390 407 aa18.4■□□□□ 0.54
CNN1-202ENST00000535659 TSPY3P0CV98 308 aa18.4■□□□□ 0.54
CNN1-202ENST00000535659 TSPY8P0CW00 308 aa18.4■□□□□ 0.54
CNN1-202ENST00000535659 PSMA5P28066 241 aa18.4■□□□□ 0.54
CNN1-202ENST00000535659 NEDD1Q8NHV4 660 aa18.4■□□□□ 0.54
CNN1-202ENST00000535659 NKX2-3Q8TAU0 364 aa18.4■□□□□ 0.54
CNN1-202ENST00000535659 GH2P01242 217 aa18.39■□□□□ 0.54
CNN1-202ENST00000535659 ASNSP08243 561 aa18.39■□□□□ 0.54
CNN1-202ENST00000535659 SCYL3Q8IZE3 742 aa18.39■□□□□ 0.54
CNN1-202ENST00000535659 IL17RAQ96F46 866 aa18.39■□□□□ 0.54
CNN1-202ENST00000535659 JAKMIP1Q96N16 626 aaKnown RBP18.39■□□□□ 0.54
CNN1-202ENST00000535659 CSADQ9Y600 493 aa18.39■□□□□ 0.54
CNN1-202ENST00000535659 TMEM88BA6NKF7 163 aa18.39■□□□□ 0.53
CNN1-202ENST00000535659 HMGB1P09429 215 aaKnown RBP18.39■□□□□ 0.53
CNN1-202ENST00000535659 VGLL4Q14135 290 aa18.39■□□□□ 0.53
CNN1-202ENST00000535659 NOL9Q5SY16 702 aaKnown RBP18.39■□□□□ 0.53
CNN1-202ENST00000535659 TMEM179Q6ZVK1 233 aa18.39■□□□□ 0.53
CNN1-202ENST00000535659 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.39■□□□□ 0.53
CNN1-202ENST00000535659 SHROOM1Q2M3G4 852 aaPredicted RBP18.38■□□□□ 0.53
CNN1-202ENST00000535659 CYB5R4Q7L1T6 521 aa18.38■□□□□ 0.53
CNN1-202ENST00000535659 MB21D2Q8IYB1 491 aaPredicted RBP18.38■□□□□ 0.53
CNN1-202ENST00000535659 SLC10A4Q96EP9 437 aa18.38■□□□□ 0.53
CNN1-202ENST00000535659 TBC1D32Q96NH3 1257 aa18.38■□□□□ 0.53
CNN1-202ENST00000535659 TM6SF1Q9BZW5 370 aa18.38■□□□□ 0.53
CNN1-202ENST00000535659 PICK1Q9NRD5 415 aa18.38■□□□□ 0.53
CNN1-202ENST00000535659 TCP11L1Q9NUJ3 509 aa18.38■□□□□ 0.53
CNN1-202ENST00000535659 ZBTB21Q9ULJ3 1066 aa18.38■□□□□ 0.53
CNN1-202ENST00000535659 PAPPA2Q9BXP8 1791 aa18.37■□□□□ 0.53
CNN1-202ENST00000535659 GUCY1A2P33402 732 aa18.37■□□□□ 0.53
CNN1-202ENST00000535659 MCM5P33992 734 aa18.37■□□□□ 0.53
CNN1-202ENST00000535659 HUNKP57058 714 aa18.37■□□□□ 0.53
CNN1-202ENST00000535659 SEPT2Q15019 361 aa18.37■□□□□ 0.53
CNN1-202ENST00000535659 RAB3GAP1Q15042 981 aa18.37■□□□□ 0.53
CNN1-202ENST00000535659 DHX32Q7L7V1 743 aaKnown RBP18.37■□□□□ 0.53
CNN1-202ENST00000535659 SAPCD2Q86UD0 394 aa18.37■□□□□ 0.53
CNN1-202ENST00000535659 IQCA1Q86XH1 822 aa18.37■□□□□ 0.53
CNN1-202ENST00000535659 CLMNQ96JQ2 1002 aa18.37■□□□□ 0.53
CNN1-202ENST00000535659 KANSL2Q9H9L4 492 aa18.37■□□□□ 0.53
CNN1-202ENST00000535659 ZSWIM6Q9HCJ5 1215 aa18.37■□□□□ 0.53
CNN1-202ENST00000535659 IL17RBQ9NRM6 502 aa18.37■□□□□ 0.53
CNN1-202ENST00000535659 SNCAIPQ9Y6H5 919 aa18.37■□□□□ 0.53
CNN1-202ENST00000535659 TRPM7Q96QT4 1865 aa18.36■□□□□ 0.53
CNN1-202ENST00000535659 PTPRAP18433 802 aa18.36■□□□□ 0.53
CNN1-202ENST00000535659 HTRA3P83110 453 aa18.36■□□□□ 0.53
CNN1-202ENST00000535659 EXOSC10Q01780 885 aaKnown RBP18.36■□□□□ 0.53
CNN1-202ENST00000535659 COL9A3Q14050 684 aaPredicted RBP18.36■□□□□ 0.53
CNN1-202ENST00000535659 BLOC1S2Q6QNY1 142 aa18.36■□□□□ 0.53
CNN1-202ENST00000535659 ELP3Q9H9T3 547 aa18.36■□□□□ 0.53
CNN1-202ENST00000535659 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.36■□□□□ 0.53
CNN1-202ENST00000535659 TLL2Q9Y6L7 1015 aa18.36■□□□□ 0.53
CNN1-202ENST00000535659 IGKV6D-41A0A0C4DH26 115 aa18.35■□□□□ 0.53
CNN1-202ENST00000535659 USP17L5A8MUK1 530 aa18.35■□□□□ 0.53
CNN1-202ENST00000535659 CASTP20810 708 aaKnown RBP18.35■□□□□ 0.53
CNN1-202ENST00000535659 CCDC178Q5BJE1 867 aa18.35■□□□□ 0.53
CNN1-202ENST00000535659 CHST3Q7LGC8 479 aa18.35■□□□□ 0.53
CNN1-202ENST00000535659 ZSCAN10Q96SZ4 725 aaPredicted RBP18.35■□□□□ 0.53
CNN1-202ENST00000535659 ZKSCAN3Q9BRR0 538 aa18.35■□□□□ 0.53
CNN1-202ENST00000535659 MTMR4Q9NYA4 1195 aa18.35■□□□□ 0.53
CNN1-202ENST00000535659 CYP46A1Q9Y6A2 500 aa18.35■□□□□ 0.53
CNN1-202ENST00000535659 ZHX2Q9Y6X8 837 aa18.35■□□□□ 0.53
CNN1-202ENST00000535659 PRC1O43663 620 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms