RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 IFNL3Q8IZI9 196 aa15.72■□□□□ 0.11
CHFR-210ENST00000535527 CENPFP49454 3210 aa15.72■□□□□ 0.11
CHFR-210ENST00000535527 PPP1R12BO60237 982 aaPredicted RBP15.71■□□□□ 0.11
CHFR-210ENST00000535527 TBC1D12O60347 775 aa15.71■□□□□ 0.11
CHFR-210ENST00000535527 GDF11O95390 407 aa15.71■□□□□ 0.11
CHFR-210ENST00000535527 FXR1P51114 621 aaKnown RBP eCLIP15.71■□□□□ 0.11
CHFR-210ENST00000535527 MAP3K9P80192 1104 aa15.71■□□□□ 0.11
CHFR-210ENST00000535527 MCMDC2Q4G0Z9 681 aa15.71■□□□□ 0.11
CHFR-210ENST00000535527 NOL9Q5SY16 702 aaKnown RBP15.71■□□□□ 0.11
CHFR-210ENST00000535527 WNK4Q96J92 1243 aa15.71■□□□□ 0.11
CHFR-210ENST00000535527 EHD4Q9H223 541 aa15.71■□□□□ 0.11
CHFR-210ENST00000535527 R3HDMLQ9H3Y0 253 aa15.71■□□□□ 0.11
CHFR-210ENST00000535527 ATP8A2Q9NTI2 1148 aa15.71■□□□□ 0.11
CHFR-210ENST00000535527 POTEFA5A3E0 1075 aa15.7■□□□□ 0.1
CHFR-210ENST00000535527 HSPD1P10809 573 aaKnown RBP15.7■□□□□ 0.1
CHFR-210ENST00000535527 GUCY1A2P33402 732 aa15.7■□□□□ 0.1
CHFR-210ENST00000535527 IREB2P48200 963 aaKnown RBP15.7■□□□□ 0.1
CHFR-210ENST00000535527 SPRYD7Q5W111 196 aa15.7■□□□□ 0.1
CHFR-210ENST00000535527 DCAF15Q66K64 600 aa15.7■□□□□ 0.1
CHFR-210ENST00000535527 CLEC10AQ8IUN9 316 aa15.7■□□□□ 0.1
CHFR-210ENST00000535527 ANKRD13AQ8IZ07 590 aa15.7■□□□□ 0.1
CHFR-210ENST00000535527 DHX36Q9H2U1 1008 aaKnown RBP15.7■□□□□ 0.1
CHFR-210ENST00000535527 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.7■□□□□ 0.14e-18■■■■■ 49.5
CHFR-210ENST00000535527 INCENPQ9NQS7 918 aa15.7■□□□□ 0.1
CHFR-210ENST00000535527 DIAPH3Q9NSV4 1193 aa15.7■□□□□ 0.1
CHFR-210ENST00000535527 PI4KBQ9UBF8 816 aa15.7■□□□□ 0.1
CHFR-210ENST00000535527 TRIM17Q9Y577 477 aa15.7■□□□□ 0.1
CHFR-210ENST00000535527 TAF6LQ9Y6J9 622 aa15.7■□□□□ 0.1
CHFR-210ENST00000535527 RLFQ13129 1914 aa15.7■□□□□ 0.1
CHFR-210ENST00000535527 MANSC4A6NHS7 340 aaPredicted RBP15.69■□□□□ 0.1
CHFR-210ENST00000535527 SPDYE5A6NIY4 337 aa15.69■□□□□ 0.1
CHFR-210ENST00000535527 PATL2C9JE40 543 aaKnown RBP15.69■□□□□ 0.1
CHFR-210ENST00000535527 PTH1RQ03431 593 aa15.69■□□□□ 0.1
CHFR-210ENST00000535527 TATDN1Q6P1N9 297 aa15.69■□□□□ 0.1
CHFR-210ENST00000535527 OTOP1Q7RTM1 612 aa15.69■□□□□ 0.1
CHFR-210ENST00000535527 STK11IPQ8N1F8 1099 aa15.69■□□□□ 0.1
CHFR-210ENST00000535527 OPTNQ96CV9 577 aa15.69■□□□□ 0.1
CHFR-210ENST00000535527 SERPINB13Q9UIV8 391 aa15.69■□□□□ 0.1
CHFR-210ENST00000535527 RBBP6Q7Z6E9 1792 aaKnown RBP15.68■□□□□ 0.1
CHFR-210ENST00000535527 SGSM2O43147 1006 aa15.68■□□□□ 0.1
CHFR-210ENST00000535527 CAP2P40123 477 aa15.68■□□□□ 0.1
CHFR-210ENST00000535527 MOGSQ13724 837 aa15.68■□□□□ 0.1
CHFR-210ENST00000535527 SBK1Q52WX2 424 aa15.68■□□□□ 0.1
CHFR-210ENST00000535527 SCYL3Q8IZE3 742 aa15.68■□□□□ 0.1
CHFR-210ENST00000535527 OTUD5Q96G74 571 aa15.68■□□□□ 0.1
CHFR-210ENST00000535527 ERO1AQ96HE7 468 aa15.68■□□□□ 0.1
CHFR-210ENST00000535527 HERC5Q9UII4 1024 aaKnown RBP15.68■□□□□ 0.1
CHFR-210ENST00000535527 UNCXA6NJT0 531 aa15.67■□□□□ 0.1
CHFR-210ENST00000535527 POLR3DP05423 398 aaPredicted RBP15.67■□□□□ 0.1
CHFR-210ENST00000535527 HLA-DOAP06340 250 aa15.67■□□□□ 0.1
CHFR-210ENST00000535527 AKR1B1P15121 316 aa15.67■□□□□ 0.1
CHFR-210ENST00000535527 CTDSPL2Q05D32 466 aa15.67■□□□□ 0.1
CHFR-210ENST00000535527 COL9A3Q14050 684 aaPredicted RBP15.67■□□□□ 0.1
CHFR-210ENST00000535527 LRRFIP1Q32MZ4 808 aaKnown RBP15.67■□□□□ 0.1
CHFR-210ENST00000535527 GIMAP6Q6P9H5 292 aa15.67■□□□□ 0.1
CHFR-210ENST00000535527 C16orf86Q6ZW13 317 aa15.67■□□□□ 0.1
CHFR-210ENST00000535527 TICAM2Q86XR7 235 aa15.67■□□□□ 0.1
CHFR-210ENST00000535527 IFNL1Q8IU54 200 aa15.67■□□□□ 0.1
CHFR-210ENST00000535527 TBC1D10CQ8IV04 446 aa15.67■□□□□ 0.1
CHFR-210ENST00000535527 ARMC5Q96C12 935 aa15.67■□□□□ 0.1
CHFR-210ENST00000535527 MS4A4AQ96JQ5 239 aa15.67■□□□□ 0.1
CHFR-210ENST00000535527 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.67■□□□□ 0.1
CHFR-210ENST00000535527 ARPP21Q9UBL0 812 aaPredicted RBP15.67■□□□□ 0.1
CHFR-210ENST00000535527 ZBTB21Q9ULJ3 1066 aa15.67■□□□□ 0.1
CHFR-210ENST00000535527 PTPN22Q9Y2R2 807 aa15.67■□□□□ 0.1
CHFR-210ENST00000535527 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.67■□□□□ 0.1
CHFR-210ENST00000535527 ZMYM6O95789 1325 aa15.67■□□□□ 0.1
CHFR-210ENST00000535527 BRCA2P51587 3418 aa15.66■□□□□ 0.1
CHFR-210ENST00000535527 KIAA0100Q14667 2235 aaKnown RBP15.66■□□□□ 0.1
CHFR-210ENST00000535527 MINDY4BA8MYZ0 360 aa15.66■□□□□ 0.1
CHFR-210ENST00000535527 IRF6O14896 467 aa15.66■□□□□ 0.1
CHFR-210ENST00000535527 FGAP02671 866 aa15.66■□□□□ 0.1
CHFR-210ENST00000535527 ZBTB48P10074 688 aaPredicted RBP15.66■□□□□ 0.1
CHFR-210ENST00000535527 PTPRAP18433 802 aa15.66■□□□□ 0.1
CHFR-210ENST00000535527 GNAT2P19087 354 aa15.66■□□□□ 0.1
CHFR-210ENST00000535527 RASA1P20936 1047 aa15.66■□□□□ 0.1
CHFR-210ENST00000535527 TDO2P48775 406 aa15.66■□□□□ 0.1
CHFR-210ENST00000535527 CDK8P49336 464 aa15.66■□□□□ 0.1
CHFR-210ENST00000535527 TTC6Q86TZ1 520 aa15.66■□□□□ 0.1
CHFR-210ENST00000535527 FOXP4Q8IVH2 680 aaPredicted RBP15.66■□□□□ 0.1
CHFR-210ENST00000535527 ESYT1Q9BSJ8 1104 aa15.66■□□□□ 0.1
CHFR-210ENST00000535527 RAD50Q92878 1312 aa15.66■□□□□ 0.1
CHFR-210ENST00000535527 IGF2BP3O00425 579 aaKnown RBP eCLIP15.65■□□□□ 0.1
CHFR-210ENST00000535527 PRDM1O75626 825 aa15.65■□□□□ 0.1
CHFR-210ENST00000535527 APPP05067 770 aa15.65■□□□□ 0.1
CHFR-210ENST00000535527 HAND2P61296 217 aa15.65■□□□□ 0.1
CHFR-210ENST00000535527 PPARAQ07869 468 aa15.65■□□□□ 0.1
CHFR-210ENST00000535527 ALX1Q15699 326 aa15.65■□□□□ 0.1
CHFR-210ENST00000535527 OTUD7BQ6GQQ9 843 aa15.65■□□□□ 0.1
CHFR-210ENST00000535527 CRACR2BQ8N4Y2 399 aaPredicted RBP15.65■□□□□ 0.1
CHFR-210ENST00000535527 BRI3BPQ8WY22 251 aa15.65■□□□□ 0.1
CHFR-210ENST00000535527 HOOK2Q96ED9 719 aa15.65■□□□□ 0.1
CHFR-210ENST00000535527 SLC10A4Q96EP9 437 aa15.65■□□□□ 0.1
CHFR-210ENST00000535527 PTPN18Q99952 460 aa15.65■□□□□ 0.1
CHFR-210ENST00000535527 NAPBQ9H115 298 aa15.65■□□□□ 0.1
CHFR-210ENST00000535527 GTF3C3Q9Y5Q9 886 aa15.65■□□□□ 0.1
CHFR-210ENST00000535527 CSADQ9Y600 493 aa15.65■□□□□ 0.1
CHFR-210ENST00000535527 A0A0G2JMZ2 1700 aa15.65■□□□□ 0.1
CHFR-210ENST00000535527 CTNND1O60716 968 aaKnown RBP15.64■□□□□ 0.09
CHFR-210ENST00000535527 GH2P01242 217 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms