RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 RUFY1Q96T51 708 aa18.02■□□□□ 0.47
MCF2L-232ENST00000535094 GBP3Q9H0R5 595 aa18.02■□□□□ 0.47
MCF2L-232ENST00000535094 TSPYL1Q9H0U9 437 aa18.02■□□□□ 0.47
MCF2L-232ENST00000535094 MYO1CO00159 1063 aa18.01■□□□□ 0.47
MCF2L-232ENST00000535094 NLRP5P59047 1200 aa18.01■□□□□ 0.47
MCF2L-232ENST00000535094 CCDC70Q6NSX1 233 aa18.01■□□□□ 0.47
MCF2L-232ENST00000535094 RAD9BQ6WBX8 426 aa18.01■□□□□ 0.47
MCF2L-232ENST00000535094 AGXT2Q9BYV1 514 aa18.01■□□□□ 0.47
MCF2L-232ENST00000535094 TMOD3Q9NYL9 352 aa18.01■□□□□ 0.47
MCF2L-232ENST00000535094 ENOX2Q16206 610 aaKnown RBP18.01■□□□□ 0.47
MCF2L-232ENST00000535094 INTS13Q9NVM9 706 aa18.01■□□□□ 0.47
MCF2L-232ENST00000535094 MACROD2A1Z1Q3 448 aa18.01■□□□□ 0.47
MCF2L-232ENST00000535094 H3BQF6 201 aa18.01■□□□□ 0.47
MCF2L-232ENST00000535094 BMP6P22004 513 aa18.01■□□□□ 0.47
MCF2L-232ENST00000535094 DNAJC10Q8IXB1 793 aa18.01■□□□□ 0.47
MCF2L-232ENST00000535094 ZNHIT6Q9NWK9 470 aaKnown RBP18.01■□□□□ 0.47
MCF2L-232ENST00000535094 DIP2BQ9P265 1576 aa18■□□□□ 0.47
MCF2L-232ENST00000535094 IRS4O14654 1257 aaPredicted RBP18■□□□□ 0.47
MCF2L-232ENST00000535094 IFNL3Q8IZI9 196 aa18■□□□□ 0.47
MCF2L-232ENST00000535094 CCDC151A5D8V7 595 aa18■□□□□ 0.47
MCF2L-232ENST00000535094 CCDC122Q5T0U0 273 aa18■□□□□ 0.47
MCF2L-232ENST00000535094 CNGA4Q8IV77 575 aa18■□□□□ 0.47
MCF2L-232ENST00000535094 DHX37Q8IY37 1157 aaKnown RBP18■□□□□ 0.47
MCF2L-232ENST00000535094 SDR42E1Q8WUS8 393 aa18■□□□□ 0.47
MCF2L-232ENST00000535094 CENPHQ9H3R5 247 aa18■□□□□ 0.47
MCF2L-232ENST00000535094 TFR2Q9UP52 801 aa18■□□□□ 0.47
MCF2L-232ENST00000535094 RRP15Q9Y3B9 282 aaKnown RBP18■□□□□ 0.47
MCF2L-232ENST00000535094 PALLDQ8WX93 1383 aa18■□□□□ 0.47
MCF2L-232ENST00000535094 ZRANB2O95218 330 aaKnown RBP eCLIP18■□□□□ 0.47
MCF2L-232ENST00000535094 DIP2AQ14689 1571 aa17.99■□□□□ 0.47
MCF2L-232ENST00000535094 PLCD1P51178 756 aa17.99■□□□□ 0.47
MCF2L-232ENST00000535094 BRD3Q15059 726 aa17.99■□□□□ 0.47
MCF2L-232ENST00000535094 ENOX1Q8TC92 643 aaKnown RBP17.99■□□□□ 0.47
MCF2L-232ENST00000535094 SYMPKQ92797 1274 aaKnown RBP17.99■□□□□ 0.47
MCF2L-232ENST00000535094 FANCGO15287 622 aa17.99■□□□□ 0.47
MCF2L-232ENST00000535094 SRGAP2O75044 1071 aa17.99■□□□□ 0.47
MCF2L-232ENST00000535094 CYP7A1P22680 504 aa17.99■□□□□ 0.47
MCF2L-232ENST00000535094 PTPAQ15257 358 aa17.99■□□□□ 0.47
MCF2L-232ENST00000535094 FCHSD1Q86WN1 690 aa17.99■□□□□ 0.47
MCF2L-232ENST00000535094 NKX2-3Q8TAU0 364 aa17.99■□□□□ 0.47
MCF2L-232ENST00000535094 DEF6Q9H4E7 631 aa17.99■□□□□ 0.47
MCF2L-232ENST00000535094 LCMT1Q9UIC8 334 aa17.99■□□□□ 0.47
MCF2L-232ENST00000535094 ADGRG1Q9Y653 693 aa17.99■□□□□ 0.47
MCF2L-232ENST00000535094 FAM208AQ9UK61 1670 aaKnown RBP17.99■□□□□ 0.47
MCF2L-232ENST00000535094 TRIM21P19474 475 aaKnown RBP17.99■□□□□ 0.47
MCF2L-232ENST00000535094 ADD2P35612 726 aa17.99■□□□□ 0.47
MCF2L-232ENST00000535094 FUT8Q9BYC5 575 aa17.99■□□□□ 0.47
MCF2L-232ENST00000535094 GPR108Q9NPR9 543 aa17.99■□□□□ 0.47
MCF2L-232ENST00000535094 FEZ2Q9UHY8 353 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-232ENST00000535094 POTEB2H3BUK9 544 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 VSNL1P62760 191 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 TTC19Q6DKK2 380 aaPredicted RBP17.98■□□□□ 0.47
MCF2L-232ENST00000535094 TRIM47Q96LD4 638 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 CTAGE1Q96RT6 745 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 KRT23Q9C075 422 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 ACTN2P35609 894 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 TCIRG1Q13488 830 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 AKNAD1Q5T1N1 836 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 PNKPQ96T60 521 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 H0YHG0 523 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 PIP4K2BP78356 416 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 PIK3AP1Q6ZUJ8 805 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 GSPT2Q8IYD1 628 aaKnown RBP17.98■□□□□ 0.47
MCF2L-232ENST00000535094 HSD3B7Q9H2F3 369 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 FAM204AQ9H8W3 233 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 HDAC6Q9UBN7 1215 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 TRIM10Q9UDY6 481 aa17.98■□□□□ 0.47
MCF2L-232ENST00000535094 DEXIO95424 95 aa17.97■□□□□ 0.47
MCF2L-232ENST00000535094 MMP1P03956 469 aa17.97■□□□□ 0.47
MCF2L-232ENST00000535094 SPATA1Q5VX52 437 aa17.97■□□□□ 0.47
MCF2L-232ENST00000535094 JAG2Q9Y219 1238 aa17.97■□□□□ 0.47
MCF2L-232ENST00000535094 STARD3NLO95772 234 aa17.97■□□□□ 0.47
MCF2L-232ENST00000535094 CATIPQ7Z7H3 387 aa17.97■□□□□ 0.47
MCF2L-232ENST00000535094 ZNF654Q8IZM8 581 aa17.97■□□□□ 0.47
MCF2L-232ENST00000535094 MICALL1Q8N3F8 863 aa17.97■□□□□ 0.47
MCF2L-232ENST00000535094 CASP8Q14790 479 aa17.96■□□□□ 0.47
MCF2L-232ENST00000535094 IFIT1BQ5T764 474 aaKnown RBP17.96■□□□□ 0.47
MCF2L-232ENST00000535094 CCDC181Q5TID7 509 aa17.96■□□□□ 0.47
MCF2L-232ENST00000535094 GOLGA5Q8TBA6 731 aa17.96■□□□□ 0.47
MCF2L-232ENST00000535094 GNL3LQ9NVN8 582 aaKnown RBP17.96■□□□□ 0.47
MCF2L-232ENST00000535094 SLC5A1P13866 664 aa17.96■□□□□ 0.47
MCF2L-232ENST00000535094 KCNJ6P48051 423 aa17.96■□□□□ 0.47
MCF2L-232ENST00000535094 FXR1P51114 621 aaKnown RBP eCLIP17.96■□□□□ 0.47
MCF2L-232ENST00000535094 FANCBQ8NB91 859 aa17.96■□□□□ 0.47
MCF2L-232ENST00000535094 LY9Q9HBG7 655 aa17.96■□□□□ 0.47
MCF2L-232ENST00000535094 PTPREP23469 700 aa17.96■□□□□ 0.47
MCF2L-232ENST00000535094 RIN2Q8WYP3 895 aaPredicted RBP17.96■□□□□ 0.47
MCF2L-232ENST00000535094 FAM107BQ9H098 131 aa17.96■□□□□ 0.47
MCF2L-232ENST00000535094 LUC7L2Q9Y383 392 aaKnown RBP17.96■□□□□ 0.47
MCF2L-232ENST00000535094 AKAP12Q02952 1782 aa17.96■□□□□ 0.47
MCF2L-232ENST00000535094 IVLP07476 585 aa17.95■□□□□ 0.46
MCF2L-232ENST00000535094 KRT2P35908 639 aa17.95■□□□□ 0.46
MCF2L-232ENST00000535094 CNNM2Q9H8M5 875 aa17.95■□□□□ 0.46
MCF2L-232ENST00000535094 MYO6Q9UM54 1294 aa17.95■□□□□ 0.46
MCF2L-232ENST00000535094 HPSEQ9Y251 543 aa17.95■□□□□ 0.46
MCF2L-232ENST00000535094 CYP2D7A0A087X1C5 515 aa17.95■□□□□ 0.46
MCF2L-232ENST00000535094 GPATCH11Q8N954 259 aa17.95■□□□□ 0.46
MCF2L-232ENST00000535094 NOA1Q8NC60 698 aaKnown RBP17.95■□□□□ 0.46
MCF2L-232ENST00000535094 TEX13AQ9BXU3 409 aaPredicted RBP17.95■□□□□ 0.46
MCF2L-232ENST00000535094 TTF2Q9UNY4 1162 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms