RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 CTNND1O60716 968 aaKnown RBP12.34□□□□□ -0.43
CLSTN3-203ENST00000534830 COL9A1P20849 921 aa12.34□□□□□ -0.43
CLSTN3-203ENST00000534830 PPP4CP60510 307 aa12.34□□□□□ -0.43
CLSTN3-203ENST00000534830 TRIM32Q13049 653 aa12.34□□□□□ -0.43
CLSTN3-203ENST00000534830 PICALMQ13492 652 aa12.34□□□□□ -0.43
CLSTN3-203ENST00000534830 CCDC158Q5M9N0 1113 aa12.34□□□□□ -0.43
CLSTN3-203ENST00000534830 TTC39AQ5SRH9 613 aa12.34□□□□□ -0.43
CLSTN3-203ENST00000534830 ZNF697Q5TEC3 545 aa12.34□□□□□ -0.43
CLSTN3-203ENST00000534830 OSBPL5Q9H0X9 879 aaPredicted RBP12.34□□□□□ -0.43
CLSTN3-203ENST00000534830 RAI14Q9P0K7 980 aa12.34□□□□□ -0.43
CLSTN3-203ENST00000534830 SLC45A1Q9Y2W3 748 aa12.34□□□□□ -0.43
CLSTN3-203ENST00000534830 ZAP70P43403 619 aa12.33□□□□□ -0.44
CLSTN3-203ENST00000534830 ZSCAN29Q8IWY8 852 aaPredicted RBP12.33□□□□□ -0.44
CLSTN3-203ENST00000534830 MAFAQ8NHW3 353 aaPredicted RBP12.33□□□□□ -0.44
CLSTN3-203ENST00000534830 CCDC8Q9H0W5 538 aaPredicted RBP12.33□□□□□ -0.44
CLSTN3-203ENST00000534830 SNRKQ9NRH2 765 aa12.33□□□□□ -0.44
CLSTN3-203ENST00000534830 TLR7Q9NYK1 1049 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-203ENST00000534830 LRP2BPQ9P2M1 347 aa12.33□□□□□ -0.44
CLSTN3-203ENST00000534830 OGDHLQ9ULD0 1010 aa12.33□□□□□ -0.44
CLSTN3-203ENST00000534830 PFASO15067 1338 aa12.33□□□□□ -0.44
CLSTN3-203ENST00000534830 OS9Q13438 667 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-203ENST00000534830 NAA16Q6N069 864 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-203ENST00000534830 ADGRA1Q86SQ6 560 aa12.32□□□□□ -0.44
CLSTN3-203ENST00000534830 METTL16Q86W50 562 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-203ENST00000534830 SH3RF3Q8TEJ3 882 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-203ENST00000534830 CDX2Q99626 313 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-203ENST00000534830 LBHD1Q9BQE6 289 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-203ENST00000534830 PIH1D3Q9NQM4 214 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-203ENST00000534830 MYH1P12882 1939 aa12.31□□□□□ -0.44
CLSTN3-203ENST00000534830 TRIM75PA6NK02 468 aa12.31□□□□□ -0.44
CLSTN3-203ENST00000534830 MS4A1P11836 297 aa12.31□□□□□ -0.44
CLSTN3-203ENST00000534830 RRP1BQ14684 758 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-203ENST00000534830 FAM110CQ1W6H9 321 aa12.31□□□□□ -0.44
CLSTN3-203ENST00000534830 LRRC26Q2I0M4 334 aa12.31□□□□□ -0.44
CLSTN3-203ENST00000534830 SIRT2Q8IXJ6 389 aa12.31□□□□□ -0.44
CLSTN3-203ENST00000534830 TEX11Q8IYF3 940 aa12.31□□□□□ -0.44
CLSTN3-203ENST00000534830 SYMPKQ92797 1274 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-203ENST00000534830 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
CLSTN3-203ENST00000534830 AATFQ9NY61 560 aaKnown RBP eCLIP12.31□□□□□ -0.44
CLSTN3-203ENST00000534830 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.31□□□□□ -0.44
CLSTN3-203ENST00000534830 PNMA3Q9UL41 463 aa12.31□□□□□ -0.44
CLSTN3-203ENST00000534830 AGTPBP1Q9UPW5 1226 aa12.31□□□□□ -0.44
CLSTN3-203ENST00000534830 EXOC6BQ9Y2D4 811 aa12.31□□□□□ -0.44
CLSTN3-203ENST00000534830 LOC285556D6RIA3 1793 aa12.3□□□□□ -0.44
CLSTN3-203ENST00000534830 TTC28Q96AY4 2481 aa12.3□□□□□ -0.44
CLSTN3-203ENST00000534830 BAG3O95817 575 aa12.3□□□□□ -0.44
CLSTN3-203ENST00000534830 PLCG2P16885 1265 aa12.3□□□□□ -0.44
CLSTN3-203ENST00000534830 ERC1Q8IUD2 1116 aa12.3□□□□□ -0.44
CLSTN3-203ENST00000534830 RPAP2Q8IXW5 612 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-203ENST00000534830 DHX36Q9H2U1 1008 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-203ENST00000534830 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.3□□□□□ -0.443e-6■■■□□ 18.9
CLSTN3-203ENST00000534830 DDX19BQ9UMR2 479 aa12.3□□□□□ -0.44
CLSTN3-203ENST00000534830 FAM196BA6NMK8 535 aa12.29□□□□□ -0.44
CLSTN3-203ENST00000534830 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-203ENST00000534830 CAP2P40123 477 aa12.29□□□□□ -0.44
CLSTN3-203ENST00000534830 HSP90AB4PQ58FF6 505 aa12.29□□□□□ -0.44
CLSTN3-203ENST00000534830 TREML2Q5T2D2 321 aa12.29□□□□□ -0.44
CLSTN3-203ENST00000534830 RHPN1Q8TCX5 695 aa12.29□□□□□ -0.44
CLSTN3-203ENST00000534830 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
CLSTN3-203ENST00000534830 TRIB2Q92519 343 aa12.29□□□□□ -0.44
CLSTN3-203ENST00000534830 TBC1D2Q9BYX2 928 aa12.29□□□□□ -0.44
CLSTN3-203ENST00000534830 PI4KBQ9UBF8 816 aa12.29□□□□□ -0.44
CLSTN3-203ENST00000534830 RAPGEFL1Q9UHV5 662 aa12.29□□□□□ -0.44
CLSTN3-203ENST00000534830 HERC5Q9UII4 1024 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-203ENST00000534830 GJD2Q9UKL4 321 aa12.29□□□□□ -0.44
CLSTN3-203ENST00000534830 FLT1P17948 1338 aa12.29□□□□□ -0.44
CLSTN3-203ENST00000534830 COL6A1P12109 1028 aa12.28□□□□□ -0.44
CLSTN3-203ENST00000534830 CYP2B6P20813 491 aa12.28□□□□□ -0.44
CLSTN3-203ENST00000534830 GCLCP48506 637 aaPredicted RBP12.28□□□□□ -0.44
CLSTN3-203ENST00000534830 TMED8Q6PL24 325 aaPredicted RBP12.28□□□□□ -0.44
CLSTN3-203ENST00000534830 CCDC84Q86UT8 332 aaPredicted RBP12.28□□□□□ -0.44
CLSTN3-203ENST00000534830 MYLIPQ8WY64 445 aa12.28□□□□□ -0.44
CLSTN3-203ENST00000534830 SEMA6BQ9H3T3 888 aa12.28□□□□□ -0.44
CLSTN3-203ENST00000534830 ANTXR1Q9H6X2 564 aa12.28□□□□□ -0.44
CLSTN3-203ENST00000534830 DNAJC18Q9H819 358 aa12.28□□□□□ -0.44
CLSTN3-203ENST00000534830 RCAN3Q9UKA8 241 aa12.28□□□□□ -0.44
CLSTN3-203ENST00000534830 COG6Q9Y2V7 657 aa12.28□□□□□ -0.44
CLSTN3-203ENST00000534830 NDUFB9Q9Y6M9 179 aa12.28□□□□□ -0.44
CLSTN3-203ENST00000534830 CYP7A1P22680 504 aa12.27□□□□□ -0.45
CLSTN3-203ENST00000534830 DYNLL1P63167 89 aaKnown RBP12.27□□□□□ -0.45
CLSTN3-203ENST00000534830 SH3D19Q5HYK7 790 aa12.27□□□□□ -0.45
CLSTN3-203ENST00000534830 MAP3K21Q5TCX8 1036 aa12.27□□□□□ -0.45
CLSTN3-203ENST00000534830 AACSQ86V21 672 aa12.27□□□□□ -0.45
CLSTN3-203ENST00000534830 FOXP4Q8IVH2 680 aaPredicted RBP12.27□□□□□ -0.45
CLSTN3-203ENST00000534830 MAPKAPK5Q8IW41 473 aa12.27□□□□□ -0.45
CLSTN3-203ENST00000534830 PROCA1Q8NCQ7 364 aaPredicted RBP12.27□□□□□ -0.45
CLSTN3-203ENST00000534830 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.27□□□□□ -0.45
CLSTN3-203ENST00000534830 NOL10Q9BSC4 688 aaKnown RBP12.27□□□□□ -0.45
CLSTN3-203ENST00000534830 DNAH12Q6ZR08 3092 aa12.27□□□□□ -0.45
CLSTN3-203ENST00000534830 USP17L5A8MUK1 530 aa12.26□□□□□ -0.45
CLSTN3-203ENST00000534830 TNFRSF10AO00220 468 aa12.26□□□□□ -0.45
CLSTN3-203ENST00000534830 FOSL2P15408 326 aa12.26□□□□□ -0.45
CLSTN3-203ENST00000534830 JAG1P78504 1218 aa12.26□□□□□ -0.45
CLSTN3-203ENST00000534830 CERS3Q8IU89 383 aa12.26□□□□□ -0.45
CLSTN3-203ENST00000534830 ZNF280CQ8ND82 737 aa12.26□□□□□ -0.45
CLSTN3-203ENST00000534830 KIF1BPQ96EK5 621 aa12.26□□□□□ -0.45
CLSTN3-203ENST00000534830 SENP6Q9GZR1 1112 aaPredicted RBP12.26□□□□□ -0.45
CLSTN3-203ENST00000534830 IL1RAPL2Q9NP60 686 aa12.26□□□□□ -0.45
CLSTN3-203ENST00000534830 PRKAG2Q9UGJ0 569 aa12.26□□□□□ -0.45
CLSTN3-203ENST00000534830 PALD1Q9ULE6 856 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms