RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 DIXDC1Q155Q3 683 aa10.38□□□□□ -0.75
SF3B2-216ENST00000534765 HSP90B2PQ58FF3 399 aa10.38□□□□□ -0.75
SF3B2-216ENST00000534765 OTUD7BQ6GQQ9 843 aa10.38□□□□□ -0.75
SF3B2-216ENST00000534765 ERO1AQ96HE7 468 aa10.38□□□□□ -0.75
SF3B2-216ENST00000534765 INTS4Q96HW7 963 aaKnown RBP10.38□□□□□ -0.75
SF3B2-216ENST00000534765 AIFM3Q96NN9 605 aa10.38□□□□□ -0.75
SF3B2-216ENST00000534765 CDC5LQ99459 802 aaKnown RBP10.38□□□□□ -0.75
SF3B2-216ENST00000534765 BRMS1Q9HCU9 246 aa10.38□□□□□ -0.75
SF3B2-216ENST00000534765 U3KPZ7 1027 aaPredicted RBP10.38□□□□□ -0.75
SF3B2-216ENST00000534765 TIAM2Q8IVF5 1701 aa10.38□□□□□ -0.75
SF3B2-216ENST00000534765 B4E1Z4 1266 aa10.38□□□□□ -0.75
SF3B2-216ENST00000534765 ZKSCAN1P17029 563 aaPredicted RBP10.38□□□□□ -0.75
SF3B2-216ENST00000534765 RXRBP28702 533 aa10.38□□□□□ -0.75
SF3B2-216ENST00000534765 MECOMQ03112 1051 aa10.38□□□□□ -0.75
SF3B2-216ENST00000534765 ILDR1Q86SU0 546 aaPredicted RBP10.38□□□□□ -0.75
SF3B2-216ENST00000534765 SHISA4Q96DD7 197 aa10.38□□□□□ -0.75
SF3B2-216ENST00000534765 CTIFO43310 598 aaKnown RBP10.37□□□□□ -0.75
SF3B2-216ENST00000534765 SKILP12757 684 aa10.37□□□□□ -0.75
SF3B2-216ENST00000534765 UBE3CQ15386 1083 aa10.37□□□□□ -0.75
SF3B2-216ENST00000534765 SLC27A3Q5K4L6 730 aa10.37□□□□□ -0.75
SF3B2-216ENST00000534765 IFNL3Q8IZI9 196 aa10.37□□□□□ -0.75
SF3B2-216ENST00000534765 PDIA3P30101 505 aaKnown RBP10.37□□□□□ -0.75
SF3B2-216ENST00000534765 GRAPQ13588 217 aa10.37□□□□□ -0.75
SF3B2-216ENST00000534765 GRAPLQ8TC17 118 aaPredicted RBP10.37□□□□□ -0.75
SF3B2-216ENST00000534765 BICD2Q8TD16 824 aa10.37□□□□□ -0.75
SF3B2-216ENST00000534765 NSUN4Q96CB9 384 aaKnown RBP10.37□□□□□ -0.75
SF3B2-216ENST00000534765 PLSCR1O15162 318 aa10.37□□□□□ -0.75
SF3B2-216ENST00000534765 TICAM2Q86XR7 235 aa10.37□□□□□ -0.75
SF3B2-216ENST00000534765 CMTR1Q8N1G2 835 aaKnown RBP10.37□□□□□ -0.75
SF3B2-216ENST00000534765 CCDC88AQ3V6T2 1871 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 CDC27P30260 824 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 RASGRP2Q7LDG7 609 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 CCDC144CPQ8IYA2 1237 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 RNF217Q8TC41 542 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 CAMKK2Q96RR4 588 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 NMT2O60551 498 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 PNMA6AP0CW24 399 aaPredicted RBP10.36□□□□□ -0.75
SF3B2-216ENST00000534765 MMP14P50281 582 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 CLCN6P51797 869 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 UBE4AQ14139 1066 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 DHX32Q7L7V1 743 aaKnown RBP10.36□□□□□ -0.75
SF3B2-216ENST00000534765 NSUN7Q8NE18 718 aaKnown RBP10.36□□□□□ -0.75
SF3B2-216ENST00000534765 NYXQ9GZU5 481 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 FAM217BQ9NTX9 383 aaPredicted RBP10.36□□□□□ -0.75
SF3B2-216ENST00000534765 SALL1Q9NSC2 1324 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 COL4A5P29400 1685 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 PRDM1O75626 825 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 MMP10P09238 476 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 TPM1P09493 284 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 CHRNA5P30532 468 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 DNM1Q05193 864 aaKnown RBP10.36□□□□□ -0.75
SF3B2-216ENST00000534765 GBP6Q6ZN66 633 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 SRLQ86TD4 932 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 ZSWIM5Q9P217 1185 aa10.36□□□□□ -0.75
SF3B2-216ENST00000534765 KLRG2A4D1S0 409 aaPredicted RBP10.35□□□□□ -0.75
SF3B2-216ENST00000534765 ADAMTS3O15072 1205 aa10.35□□□□□ -0.75
SF3B2-216ENST00000534765 LIG3P49916 1009 aa10.35□□□□□ -0.75
SF3B2-216ENST00000534765 SNW1Q13573 536 aaKnown RBP10.35□□□□□ -0.75
SF3B2-216ENST00000534765 TTC19Q6DKK2 380 aaPredicted RBP10.35□□□□□ -0.75
SF3B2-216ENST00000534765 ALDH8A1Q9H2A2 487 aaPredicted RBP10.35□□□□□ -0.75
SF3B2-216ENST00000534765 AATFQ9NY61 560 aaKnown RBP eCLIP10.35□□□□□ -0.75
SF3B2-216ENST00000534765 STX6O43752 255 aa10.35□□□□□ -0.75
SF3B2-216ENST00000534765 CYP7A1P22680 504 aa10.35□□□□□ -0.75
SF3B2-216ENST00000534765 GUCY1B3Q02153 619 aa10.35□□□□□ -0.75
SF3B2-216ENST00000534765 ZNF772Q68DY9 489 aaPredicted RBP10.35□□□□□ -0.75
SF3B2-216ENST00000534765 EPC1Q9H2F5 836 aa10.35□□□□□ -0.75
SF3B2-216ENST00000534765 UQCRFS1P1P0C7P4 283 aa10.35□□□□□ -0.75
SF3B2-216ENST00000534765 SSR1P43307 286 aaKnown RBP10.35□□□□□ -0.75
SF3B2-216ENST00000534765 SMC1AQ14683 1233 aaKnown RBP10.35□□□□□ -0.75
SF3B2-216ENST00000534765 PACS2Q86VP3 889 aa10.35□□□□□ -0.75
SF3B2-216ENST00000534765 IGDCC4Q8TDY8 1250 aa10.35□□□□□ -0.75
SF3B2-216ENST00000534765 PPM1EQ8WY54 764 aa10.35□□□□□ -0.75
SF3B2-216ENST00000534765 TNMDQ9H2S6 317 aa10.35□□□□□ -0.75
SF3B2-216ENST00000534765 LRP2BPQ9P2M1 347 aa10.35□□□□□ -0.75
SF3B2-216ENST00000534765 DNAI1Q9UI46 699 aa10.35□□□□□ -0.75
SF3B2-216ENST00000534765 LAMB1P07942 1786 aa10.35□□□□□ -0.75
SF3B2-216ENST00000534765 BAZ2BQ9UIF8 2168 aaKnown RBP10.34□□□□□ -0.75
SF3B2-216ENST00000534765 ATP2B1P20020 1258 aa10.34□□□□□ -0.75
SF3B2-216ENST00000534765 ANKIB1Q9P2G1 1089 aa10.34□□□□□ -0.75
SF3B2-216ENST00000534765 SLC4A4Q9Y6R1 1079 aa10.34□□□□□ -0.75
SF3B2-216ENST00000534765 MAST2Q6P0Q8 1798 aa10.34□□□□□ -0.75
SF3B2-216ENST00000534765 PRC1O43663 620 aa10.34□□□□□ -0.75
SF3B2-216ENST00000534765 ADD1P35611 737 aaKnown RBP10.34□□□□□ -0.75
SF3B2-216ENST00000534765 SEMA3FQ13275 785 aa10.34□□□□□ -0.75
SF3B2-216ENST00000534765 EGFL6Q8IUX8 553 aa10.34□□□□□ -0.75
SF3B2-216ENST00000534765 ZNF219Q9P2Y4 722 aaPredicted RBP10.34□□□□□ -0.75
SF3B2-216ENST00000534765 DDX60LQ5H9U9 1706 aaKnown RBP10.34□□□□□ -0.75
SF3B2-216ENST00000534765 WDR33Q9C0J8 1336 aaKnown RBP10.34□□□□□ -0.75
SF3B2-216ENST00000534765 ZSCAN22P10073 491 aaPredicted RBP10.34□□□□□ -0.75
SF3B2-216ENST00000534765 SRGNP10124 158 aa10.34□□□□□ -0.75
SF3B2-216ENST00000534765 HIBADHP31937 336 aaKnown RBP10.34□□□□□ -0.75
SF3B2-216ENST00000534765 MCM2P49736 904 aa10.34□□□□□ -0.75
SF3B2-216ENST00000534765 ARID5BQ14865 1188 aa10.34□□□□□ -0.75
SF3B2-216ENST00000534765 RNF20Q5VTR2 975 aa10.34□□□□□ -0.75
SF3B2-216ENST00000534765 CERS5Q8N5B7 392 aa10.34□□□□□ -0.75
SF3B2-216ENST00000534765 AIDAQ96BJ3 306 aa10.34□□□□□ -0.75
SF3B2-216ENST00000534765 NUP62CLQ9H1M0 184 aa10.34□□□□□ -0.75
SF3B2-216ENST00000534765 SMC3Q9UQE7 1217 aa10.34□□□□□ -0.75
SF3B2-216ENST00000534765 RIMBP2O15034 1052 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 USP8P40818 1118 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms