RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 ADD2P35612 726 aa12.56□□□□□ -0.4
CSDE1-217ENST00000534699 PSMC4P43686 418 aa12.56□□□□□ -0.4
CSDE1-217ENST00000534699 PRPF38BQ5VTL8 546 aaKnown RBP12.56□□□□□ -0.4
CSDE1-217ENST00000534699 COA7Q96BR5 231 aa12.56□□□□□ -0.4
CSDE1-217ENST00000534699 ZBTB21Q9ULJ3 1066 aa12.56□□□□□ -0.4
CSDE1-217ENST00000534699 ADGRA1Q86SQ6 560 aa12.56□□□□□ -0.4
CSDE1-217ENST00000534699 MAPKAPK5Q8IW41 473 aa12.56□□□□□ -0.4
CSDE1-217ENST00000534699 KIAA1683Q9H0B3 1180 aa12.56□□□□□ -0.4
CSDE1-217ENST00000534699 ECHDC1Q9NTX5 307 aa12.56□□□□□ -0.4
CSDE1-217ENST00000534699 MYPNQ86TC9 1320 aa12.56□□□□□ -0.4
CSDE1-217ENST00000534699 GABPAQ06546 454 aa12.55□□□□□ -0.4
CSDE1-217ENST00000534699 SLC9C2Q5TAH2 1124 aa12.55□□□□□ -0.4
CSDE1-217ENST00000534699 SH2D4AQ9H788 454 aa12.55□□□□□ -0.4
CSDE1-217ENST00000534699 SYNPO2Q9UMS6 1093 aa12.55□□□□□ -0.4
CSDE1-217ENST00000534699 PTCH2Q9Y6C5 1203 aa12.55□□□□□ -0.4
CSDE1-217ENST00000534699 ZNF236Q9UL36 1845 aa12.55□□□□□ -0.4
CSDE1-217ENST00000534699 SPP2Q13103 211 aa12.55□□□□□ -0.4
CSDE1-217ENST00000534699 SMCR8Q8TEV9 937 aaPredicted RBP12.55□□□□□ -0.4
CSDE1-217ENST00000534699 CPA4Q9UI42 421 aa12.55□□□□□ -0.4
CSDE1-217ENST00000534699 ERC2O15083 957 aa12.55□□□□□ -0.4
CSDE1-217ENST00000534699 FMNL1O95466 1100 aaPredicted RBP12.55□□□□□ -0.4
CSDE1-217ENST00000534699 GNAT2P19087 354 aa12.55□□□□□ -0.4
CSDE1-217ENST00000534699 RAET1EQ8TD07 263 aa12.55□□□□□ -0.4
CSDE1-217ENST00000534699 IL1RAPL2Q9NP60 686 aa12.55□□□□□ -0.4
CSDE1-217ENST00000534699 GRK4P32298 578 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 SOCS4Q8WXH5 440 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 ZNF532Q9HCE3 1301 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 USP17L15C9J2P7 530 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 USP17L13C9JLJ4 530 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 USP17L11C9JVI0 530 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 USP17L18D6R9N7 530 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 USP17L22D6RA61 530 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 USP17L17D6RBQ6 530 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 USP17L19D6RCP7 530 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 USP17L20D6RJB6 530 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 POLR3DP05423 398 aaPredicted RBP12.54□□□□□ -0.4
CSDE1-217ENST00000534699 MAPK4P31152 587 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 SOX10P56693 466 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 DYNLL1P63167 89 aaKnown RBP12.54□□□□□ -0.4
CSDE1-217ENST00000534699 USP17L24Q0WX57 530 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 CERKLQ49MI3 558 aaPredicted RBP12.54□□□□□ -0.4
CSDE1-217ENST00000534699 SBK1Q52WX2 424 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 PPP4R3BQ5MIZ7 849 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 DNAJC18Q9H819 358 aa12.54□□□□□ -0.4
CSDE1-217ENST00000534699 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.54□□□□□ -0.4
CSDE1-217ENST00000534699 TRIM75PA6NK02 468 aa12.53□□□□□ -0.4
CSDE1-217ENST00000534699 NT5C2P49902 561 aa12.53□□□□□ -0.4
CSDE1-217ENST00000534699 IRX3P78415 501 aaPredicted RBP12.53□□□□□ -0.4
CSDE1-217ENST00000534699 ABCB5Q2M3G0 1257 aa12.53□□□□□ -0.4
CSDE1-217ENST00000534699 GOLIM4O00461 696 aa12.53□□□□□ -0.4
CSDE1-217ENST00000534699 GLRX3O76003 335 aaKnown RBP12.53□□□□□ -0.4
CSDE1-217ENST00000534699 XRCC5P13010 732 aaKnown RBP12.53□□□□□ -0.4
CSDE1-217ENST00000534699 CCNA1P78396 465 aa12.53□□□□□ -0.4
CSDE1-217ENST00000534699 TMEM179Q6ZVK1 233 aa12.53□□□□□ -0.4
CSDE1-217ENST00000534699 ANKLE1Q8NAG6 615 aa12.53□□□□□ -0.4
CSDE1-217ENST00000534699 ASCC2Q9H1I8 757 aaPredicted RBP12.53□□□□□ -0.4
CSDE1-217ENST00000534699 ANTXR1Q9H6X2 564 aa12.53□□□□□ -0.4
CSDE1-217ENST00000534699 ZNF287Q9HBT7 754 aa12.53□□□□□ -0.4
CSDE1-217ENST00000534699 ARPP21Q9UBL0 812 aaPredicted RBP12.53□□□□□ -0.4
CSDE1-217ENST00000534699 PALD1Q9ULE6 856 aa12.53□□□□□ -0.4
CSDE1-217ENST00000534699 RABGAP1Q9Y3P9 1069 aa12.53□□□□□ -0.4
CSDE1-217ENST00000534699 A0A0G2JMZ2 1700 aa12.52□□□□□ -0.4
CSDE1-217ENST00000534699 GJB1P08034 283 aa12.52□□□□□ -0.41
CSDE1-217ENST00000534699 RRP1P56182 461 aaKnown RBP12.52□□□□□ -0.41
CSDE1-217ENST00000534699 KBTBD3Q8NAB2 608 aa12.52□□□□□ -0.41
CSDE1-217ENST00000534699 LPAR1Q92633 364 aa12.52□□□□□ -0.41
CSDE1-217ENST00000534699 GREB1LQ9C091 1923 aaPredicted RBP12.52□□□□□ -0.41
CSDE1-217ENST00000534699 TNPO2O14787 897 aaKnown RBP12.52□□□□□ -0.41
CSDE1-217ENST00000534699 DCP1AQ9NPI6 582 aaPredicted RBP12.52□□□□□ -0.41
CSDE1-217ENST00000534699 ZSWIM8A7E2V4 1837 aa12.51□□□□□ -0.41
CSDE1-217ENST00000534699 ROBO3Q96MS0 1386 aa12.51□□□□□ -0.41
CSDE1-217ENST00000534699 COPB2P35606 906 aa12.51□□□□□ -0.41
CSDE1-217ENST00000534699 HMGCS2P54868 508 aa12.51□□□□□ -0.41
CSDE1-217ENST00000534699 HDAC1Q13547 482 aaPredicted RBP12.51□□□□□ -0.41
CSDE1-217ENST00000534699 RRP1BQ14684 758 aaKnown RBP12.51□□□□□ -0.41
CSDE1-217ENST00000534699 MB21D1Q8N884 522 aa12.51□□□□□ -0.41
CSDE1-217ENST00000534699 GPRC5AQ8NFJ5 357 aa12.51□□□□□ -0.41
CSDE1-217ENST00000534699 PLXNB2O15031 1838 aa12.51□□□□□ -0.41
CSDE1-217ENST00000534699 SHMT1P34896 483 aa12.51□□□□□ -0.41
CSDE1-217ENST00000534699 APPBP2Q92624 585 aa12.51□□□□□ -0.41
CSDE1-217ENST00000534699 DNAJC2Q99543 621 aaKnown RBP12.51□□□□□ -0.41
CSDE1-217ENST00000534699 CYP2C8P10632 490 aa12.5□□□□□ -0.41
CSDE1-217ENST00000534699 GJA8P48165 433 aa12.5□□□□□ -0.41
CSDE1-217ENST00000534699 SLC4A8Q2Y0W8 1093 aa12.5□□□□□ -0.41
CSDE1-217ENST00000534699 MIGA1Q8NAN2 632 aa12.5□□□□□ -0.41
CSDE1-217ENST00000534699 SHCBP1Q8NEM2 672 aa12.5□□□□□ -0.41
CSDE1-217ENST00000534699 ARHGEF10LQ9HCE6 1279 aa12.5□□□□□ -0.41
CSDE1-217ENST00000534699 ZBTB47Q9UFB7 747 aaPredicted RBP12.5□□□□□ -0.41
CSDE1-217ENST00000534699 MTMR2Q13614 643 aa12.5□□□□□ -0.41
CSDE1-217ENST00000534699 TREML2Q5T2D2 321 aa12.5□□□□□ -0.41
CSDE1-217ENST00000534699 C12orf60Q5U649 245 aa12.5□□□□□ -0.41
CSDE1-217ENST00000534699 CATSPERGQ6ZRH7 1159 aa12.5□□□□□ -0.41
CSDE1-217ENST00000534699 C16orf86Q6ZW13 317 aa12.5□□□□□ -0.41
CSDE1-217ENST00000534699 ADCY3O60266 1144 aa12.49□□□□□ -0.41
CSDE1-217ENST00000534699 GH2P01242 217 aa12.49□□□□□ -0.41
CSDE1-217ENST00000534699 HERVK_113P62684 666 aa12.49□□□□□ -0.41
CSDE1-217ENST00000534699 BOLA2Q9H3K6 86 aa12.49□□□□□ -0.41
CSDE1-217ENST00000534699 MCM9Q9NXL9 1143 aa12.49□□□□□ -0.41
CSDE1-217ENST00000534699 HOXC10Q9NYD6 342 aa12.49□□□□□ -0.41
CSDE1-217ENST00000534699 SAP30BPQ9UHR5 308 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms