RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 GDF11O95390 407 aa22.47■■□□□ 1.19
CTSB-233ENST00000534636 GJA8P48165 433 aa22.47■■□□□ 1.19
CTSB-233ENST00000534636 BACE1P56817 501 aa22.47■■□□□ 1.19
CTSB-233ENST00000534636 METTL16Q86W50 562 aaKnown RBP22.47■■□□□ 1.19
CTSB-233ENST00000534636 PXYLP1Q8TE99 480 aa22.47■■□□□ 1.19
CTSB-233ENST00000534636 SHISA4Q96DD7 197 aa22.47■■□□□ 1.19
CTSB-233ENST00000534636 DNAJC18Q9H819 358 aa22.47■■□□□ 1.19
CTSB-233ENST00000534636 DDX19BQ9UMR2 479 aa22.47■■□□□ 1.19
CTSB-233ENST00000534636 C19orf81C9J6K1 198 aa22.46■■□□□ 1.19
CTSB-233ENST00000534636 TTF1Q15361 905 aaPredicted RBP22.46■■□□□ 1.19
CTSB-233ENST00000534636 CLASRPQ8N2M8 674 aaKnown RBP22.46■■□□□ 1.19
CTSB-233ENST00000534636 RHPN1Q8TCX5 695 aa22.46■■□□□ 1.19
CTSB-233ENST00000534636 CHMP4BQ9H444 224 aaKnown RBP22.46■■□□□ 1.19
CTSB-233ENST00000534636 IL1RAPL2Q9NP60 686 aa22.46■■□□□ 1.19
CTSB-233ENST00000534636 ZBTB21Q9ULJ3 1066 aa22.46■■□□□ 1.19
CTSB-233ENST00000534636 NDUFB9Q9Y6M9 179 aa22.46■■□□□ 1.19
CTSB-233ENST00000534636 USP17L10C9JJH3 530 aa22.45■■□□□ 1.18
CTSB-233ENST00000534636 INHAP05111 366 aa22.45■■□□□ 1.18
CTSB-233ENST00000534636 ELNP15502 786 aa22.45■■□□□ 1.18
CTSB-233ENST00000534636 KIF1BPQ96EK5 621 aa22.45■■□□□ 1.18
CTSB-233ENST00000534636 NAV1Q8NEY1 1877 aa22.45■■□□□ 1.18
CTSB-233ENST00000534636 APBB1O00213 710 aa22.44■■□□□ 1.18
CTSB-233ENST00000534636 RPAP2Q8IXW5 612 aaPredicted RBP22.44■■□□□ 1.18
CTSB-233ENST00000534636 UNC93B1Q9H1C4 597 aa22.44■■□□□ 1.18
CTSB-233ENST00000534636 ANTXR1Q9H6X2 564 aa22.44■■□□□ 1.18
CTSB-233ENST00000534636 PCDH10Q9P2E7 1040 aa22.44■■□□□ 1.18
CTSB-233ENST00000534636 IFIT2P09913 472 aaKnown RBP22.43■■□□□ 1.18
CTSB-233ENST00000534636 HABP4Q5JVS0 413 aaKnown RBP22.43■■□□□ 1.18
CTSB-233ENST00000534636 TTC6Q86TZ1 520 aa22.43■■□□□ 1.18
CTSB-233ENST00000534636 U2AF1L4Q8WU68 220 aaKnown RBP22.43■■□□□ 1.18
CTSB-233ENST00000534636 HTATIP2Q9BUP3 242 aa22.43■■□□□ 1.18
CTSB-233ENST00000534636 SERPINB13Q9UIV8 391 aa22.43■■□□□ 1.18
CTSB-233ENST00000534636 DPF3Q92784 378 aa22.42■■□□□ 1.18
CTSB-233ENST00000534636 FEZ1Q99689 392 aa22.42■■□□□ 1.18
CTSB-233ENST00000534636 BCL11AQ9H165 835 aa22.42■■□□□ 1.18
CTSB-233ENST00000534636 EHD4Q9H223 541 aa22.42■■□□□ 1.18
CTSB-233ENST00000534636 COG6Q9Y2V7 657 aa22.42■■□□□ 1.18
CTSB-233ENST00000534636 MAGEB6P1A0A0J9YX57 407 aa22.41■■□□□ 1.18
CTSB-233ENST00000534636 FARP2O94887 1054 aaPredicted RBP22.41■■□□□ 1.18
CTSB-233ENST00000534636 GH2P01242 217 aa22.41■■□□□ 1.18
CTSB-233ENST00000534636 CAPN2P17655 700 aa22.41■■□□□ 1.18
CTSB-233ENST00000534636 HOXA7P31268 230 aaPredicted RBP22.41■■□□□ 1.18
CTSB-233ENST00000534636 GTF3C2Q8WUA4 911 aaPredicted RBP22.41■■□□□ 1.18
CTSB-233ENST00000534636 DNAJC2Q99543 621 aaKnown RBP22.41■■□□□ 1.18
CTSB-233ENST00000534636 DDX60LQ5H9U9 1706 aaKnown RBP22.4■■□□□ 1.18
CTSB-233ENST00000534636 SGPL1O95470 568 aa22.4■■□□□ 1.18
CTSB-233ENST00000534636 JAG1P78504 1218 aa22.4■■□□□ 1.18
CTSB-233ENST00000534636 SHROOM1Q2M3G4 852 aaPredicted RBP22.4■■□□□ 1.18
CTSB-233ENST00000534636 USP17L2Q6R6M4 530 aa22.4■■□□□ 1.18
CTSB-233ENST00000534636 CCAR1Q8IX12 1150 aaKnown RBP22.4■■□□□ 1.18
CTSB-233ENST00000534636 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.4■■□□□ 1.18
CTSB-233ENST00000534636 MORF4L1Q9UBU8 362 aa22.4■■□□□ 1.18
CTSB-233ENST00000534636 RAB11FIP3O75154 756 aa22.39■■□□□ 1.17
CTSB-233ENST00000534636 HMGCRP04035 888 aa22.39■■□□□ 1.17
CTSB-233ENST00000534636 POLR3DP05423 398 aaPredicted RBP22.39■■□□□ 1.17
CTSB-233ENST00000534636 HERVK_113P62684 666 aa22.39■■□□□ 1.17
CTSB-233ENST00000534636 SLC9C2Q5TAH2 1124 aa22.39■■□□□ 1.17
CTSB-233ENST00000534636 GPRC5AQ8NFJ5 357 aa22.39■■□□□ 1.17
CTSB-233ENST00000534636 CRNKL1Q9BZJ0 848 aaKnown RBP22.39■■□□□ 1.17
CTSB-233ENST00000534636 ZBTB40Q9NUA8 1239 aa22.39■■□□□ 1.17
CTSB-233ENST00000534636 TRIOBPQ9H2D6 2365 aa22.38■■□□□ 1.17
CTSB-233ENST00000534636 H0YGN5 161 aa22.38■■□□□ 1.17
CTSB-233ENST00000534636 GOLIM4O00461 696 aa22.38■■□□□ 1.17
CTSB-233ENST00000534636 TFRCP02786 760 aaKnown RBP22.38■■□□□ 1.17
CTSB-233ENST00000534636 PDE6AP16499 860 aa22.38■■□□□ 1.17
CTSB-233ENST00000534636 PDE3AQ14432 1141 aa22.38■■□□□ 1.17
CTSB-233ENST00000534636 RAB3GAP1Q15042 981 aa22.38■■□□□ 1.17
CTSB-233ENST00000534636 CERKLQ49MI3 558 aaPredicted RBP22.38■■□□□ 1.17
CTSB-233ENST00000534636 TATDN1Q6P1N9 297 aa22.38■■□□□ 1.17
CTSB-233ENST00000534636 DEFB118Q96PH6 123 aa22.38■■□□□ 1.17
CTSB-233ENST00000534636 P2RX7Q99572 595 aaKnown RBP22.38■■□□□ 1.17
CTSB-233ENST00000534636 CABP5Q9NP86 173 aa22.38■■□□□ 1.17
CTSB-233ENST00000534636 RCAN3Q9UKA8 241 aa22.38■■□□□ 1.17
CTSB-233ENST00000534636 MYH8P13535 1937 aa22.37■■□□□ 1.17
CTSB-233ENST00000534636 USP14P54578 494 aa22.37■■□□□ 1.17
CTSB-233ENST00000534636 ABCB5Q2M3G0 1257 aa22.37■■□□□ 1.17
CTSB-233ENST00000534636 SOCS4Q8WXH5 440 aa22.37■■□□□ 1.17
CTSB-233ENST00000534636 RIOK1Q9BRS2 568 aaKnown RBP22.37■■□□□ 1.17
CTSB-233ENST00000534636 PAK6Q9NQU5 681 aaPredicted RBP22.37■■□□□ 1.17
CTSB-233ENST00000534636 ZYXQ15942 572 aaKnown RBP22.36■■□□□ 1.17
CTSB-233ENST00000534636 UBE2Q1Q7Z7E8 422 aa22.36■■□□□ 1.17
CTSB-233ENST00000534636 PAGR1Q9BTK6 254 aa22.36■■□□□ 1.17
CTSB-233ENST00000534636 CWC22Q9HCG8 908 aaKnown RBP22.36■■□□□ 1.17
CTSB-233ENST00000534636 PLXNB2O15031 1838 aa22.36■■□□□ 1.17
CTSB-233ENST00000534636 MYH7P12883 1935 aa22.35■■□□□ 1.17
CTSB-233ENST00000534636 ZNF532Q9HCE3 1301 aa22.35■■□□□ 1.17
CTSB-233ENST00000534636 MAPK4P31152 587 aa22.35■■□□□ 1.17
CTSB-233ENST00000534636 NUDT12Q9BQG2 462 aa22.35■■□□□ 1.17
CTSB-233ENST00000534636 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.35■■□□□ 1.171e-7■■■□□ 16.2
CTSB-233ENST00000534636 EMILIN3Q9NT22 766 aa22.35■■□□□ 1.17
CTSB-233ENST00000534636 MCM9Q9NXL9 1143 aa22.35■■□□□ 1.17
CTSB-233ENST00000534636 NR2E3Q9Y5X4 410 aa22.35■■□□□ 1.17
CTSB-233ENST00000534636 ERVK-9P63128 1117 aa22.34■■□□□ 1.17
CTSB-233ENST00000534636 ERVK-24P63145 666 aa22.34■■□□□ 1.17
CTSB-233ENST00000534636 SIRT2Q8IXJ6 389 aa22.34■■□□□ 1.17
CTSB-233ENST00000534636 C12orf42Q96LP6 360 aa22.34■■□□□ 1.17
CTSB-233ENST00000534636 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.34■■□□□ 1.178e-7■■□□□ 12
CTSB-233ENST00000534636 GJD2Q9UKL4 321 aa22.34■■□□□ 1.17
CTSB-233ENST00000534636 COLQQ9Y215 455 aaPredicted RBP22.34■■□□□ 1.17
CTSB-233ENST00000534636 USP17L15C9J2P7 530 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms