RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 EHD4Q9H223 541 aa17.05■□□□□ 0.32
SF3B2-215ENST00000534307 PAG1Q9NWQ8 432 aa17.05■□□□□ 0.32
SF3B2-215ENST00000534307 PTCH2Q9Y6C5 1203 aa17.05■□□□□ 0.32
SF3B2-215ENST00000534307 MYH7P12883 1935 aa17.04■□□□□ 0.32
SF3B2-215ENST00000534307 MAGEB6P1A0A0J9YX57 407 aa17.04■□□□□ 0.32
SF3B2-215ENST00000534307 GNRH1P01148 92 aa17.04■□□□□ 0.32
SF3B2-215ENST00000534307 ASNSP08243 561 aa17.04■□□□□ 0.32
SF3B2-215ENST00000534307 ADD2P35612 726 aa17.04■□□□□ 0.32
SF3B2-215ENST00000534307 USP5P45974 858 aa17.04■□□□□ 0.32
SF3B2-215ENST00000534307 SLC9C1Q4G0N8 1177 aa17.04■□□□□ 0.32
SF3B2-215ENST00000534307 TATDN1Q6P1N9 297 aa17.04■□□□□ 0.32
SF3B2-215ENST00000534307 CRACR2BQ8N4Y2 399 aaPredicted RBP17.04■□□□□ 0.32
SF3B2-215ENST00000534307 TRIM47Q96LD4 638 aa17.04■□□□□ 0.32
SF3B2-215ENST00000534307 BCL11AQ9H165 835 aa17.04■□□□□ 0.32
SF3B2-215ENST00000534307 GINM1Q9NU53 330 aa17.04■□□□□ 0.32
SF3B2-215ENST00000534307 HMGCS2P54868 508 aa17.03■□□□□ 0.32
SF3B2-215ENST00000534307 KIF22Q14807 665 aa17.03■□□□□ 0.32
SF3B2-215ENST00000534307 SLC4A8Q2Y0W8 1093 aa17.03■□□□□ 0.32
SF3B2-215ENST00000534307 SLFNL1Q499Z3 407 aa17.03■□□□□ 0.32
SF3B2-215ENST00000534307 CHRDL2Q6WN34 429 aa17.03■□□□□ 0.32
SF3B2-215ENST00000534307 SERPINB13Q9UIV8 391 aa17.03■□□□□ 0.32
SF3B2-215ENST00000534307 ZBTB21Q9ULJ3 1066 aa17.03■□□□□ 0.32
SF3B2-215ENST00000534307 MGAMO43451 1857 aa17.03■□□□□ 0.32
SF3B2-215ENST00000534307 GDF11O95390 407 aa17.02■□□□□ 0.32
SF3B2-215ENST00000534307 CHGBP05060 677 aa17.02■□□□□ 0.32
SF3B2-215ENST00000534307 PSMC4P43686 418 aa17.02■□□□□ 0.32
SF3B2-215ENST00000534307 PLCD1P51178 756 aa17.02■□□□□ 0.32
SF3B2-215ENST00000534307 GABPAQ06546 454 aa17.02■□□□□ 0.32
SF3B2-215ENST00000534307 LCORLQ8N3X6 602 aa17.02■□□□□ 0.32
SF3B2-215ENST00000534307 TRIM34Q9BYJ4 488 aa17.02■□□□□ 0.32
SF3B2-215ENST00000534307 AS3MTQ9HBK9 375 aa17.02■□□□□ 0.32
SF3B2-215ENST00000534307 ECHDC1Q9NTX5 307 aa17.02■□□□□ 0.32
SF3B2-215ENST00000534307 PRMT2P55345 433 aa17.01■□□□□ 0.31
SF3B2-215ENST00000534307 BACE1P56817 501 aa17.01■□□□□ 0.31
SF3B2-215ENST00000534307 MTMR2Q13614 643 aa17.01■□□□□ 0.31
SF3B2-215ENST00000534307 TTC6Q86TZ1 520 aa17.01■□□□□ 0.31
SF3B2-215ENST00000534307 CRNKL1Q9BZJ0 848 aaKnown RBP17.01■□□□□ 0.31
SF3B2-215ENST00000534307 DCP1AQ9NPI6 582 aaPredicted RBP17.01■□□□□ 0.31
SF3B2-215ENST00000534307 SRRDQ9UH36 339 aa17.01■□□□□ 0.31
SF3B2-215ENST00000534307 MYCP01106 439 aaPredicted RBP17■□□□□ 0.31
SF3B2-215ENST00000534307 OSBPP22059 807 aa17■□□□□ 0.31
SF3B2-215ENST00000534307 SHMT1P34896 483 aa17■□□□□ 0.31
SF3B2-215ENST00000534307 UBE3CQ15386 1083 aa17■□□□□ 0.31
SF3B2-215ENST00000534307 NBPF11Q86T75 865 aa17■□□□□ 0.31
SF3B2-215ENST00000534307 SDR42E1Q8WUS8 393 aa17■□□□□ 0.31
SF3B2-215ENST00000534307 DDX24Q9GZR7 859 aaKnown RBP eCLIP17■□□□□ 0.31
SF3B2-215ENST00000534307 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
SF3B2-215ENST00000534307 PNMA3Q9UL41 463 aa17■□□□□ 0.31
SF3B2-215ENST00000534307 ALPK3Q96L96 1907 aa17■□□□□ 0.31
SF3B2-215ENST00000534307 DLL1O00548 723 aa16.99■□□□□ 0.31
SF3B2-215ENST00000534307 GH2P01242 217 aa16.99■□□□□ 0.31
SF3B2-215ENST00000534307 EVX2Q03828 476 aa16.99■□□□□ 0.31
SF3B2-215ENST00000534307 SMCR8Q8TEV9 937 aaPredicted RBP16.99■□□□□ 0.31
SF3B2-215ENST00000534307 SHISA4Q96DD7 197 aa16.99■□□□□ 0.31
SF3B2-215ENST00000534307 YTHDC1Q96MU7 727 aaKnown RBP16.99■□□□□ 0.31
SF3B2-215ENST00000534307 CRBNQ96SW2 442 aa16.99■□□□□ 0.31
SF3B2-215ENST00000534307 ARMT1Q9H993 441 aa16.99■□□□□ 0.31
SF3B2-215ENST00000534307 C19orf81C9J6K1 198 aa16.98■□□□□ 0.31
SF3B2-215ENST00000534307 USP17L10C9JJH3 530 aa16.98■□□□□ 0.31
SF3B2-215ENST00000534307 ECM2O94769 699 aaPredicted RBP16.98■□□□□ 0.31
SF3B2-215ENST00000534307 MBD4O95243 580 aa16.98■□□□□ 0.31
SF3B2-215ENST00000534307 FMNL1O95466 1100 aaPredicted RBP16.98■□□□□ 0.31
SF3B2-215ENST00000534307 HOXA7P31268 230 aaPredicted RBP16.98■□□□□ 0.31
SF3B2-215ENST00000534307 FCGRTP55899 365 aa16.98■□□□□ 0.31
SF3B2-215ENST00000534307 FAM110CQ1W6H9 321 aa16.98■□□□□ 0.31
SF3B2-215ENST00000534307 SH3TC2Q8TF17 1288 aa16.98■□□□□ 0.31
SF3B2-215ENST00000534307 ASCC2Q9H1I8 757 aaPredicted RBP16.98■□□□□ 0.31
SF3B2-215ENST00000534307 BAZ2AQ9UIF9 1905 aaKnown RBP16.98■□□□□ 0.31
SF3B2-215ENST00000534307 PRKAB2O43741 272 aa16.97■□□□□ 0.31
SF3B2-215ENST00000534307 PABPC4Q13310 644 aaKnown RBP eCLIP16.97■□□□□ 0.31
SF3B2-215ENST00000534307 CERKLQ49MI3 558 aaPredicted RBP16.97■□□□□ 0.31
SF3B2-215ENST00000534307 TSHZ3Q63HK5 1081 aa16.97■□□□□ 0.31
SF3B2-215ENST00000534307 ANKRD13CQ8N6S4 541 aa16.97■□□□□ 0.31
SF3B2-215ENST00000534307 PRO3102Q9H379 93 aa16.97■□□□□ 0.31
SF3B2-215ENST00000534307 MCM9Q9NXL9 1143 aa16.97■□□□□ 0.31
SF3B2-215ENST00000534307 VCANP13611 3396 aa16.97■□□□□ 0.31
SF3B2-215ENST00000534307 MYPNQ86TC9 1320 aa16.96■□□□□ 0.31
SF3B2-215ENST00000534307 POLR3DP05423 398 aaPredicted RBP16.96■□□□□ 0.31
SF3B2-215ENST00000534307 CYP2D6P10635 497 aa16.96■□□□□ 0.31
SF3B2-215ENST00000534307 HOXD10P28358 340 aa16.96■□□□□ 0.31
SF3B2-215ENST00000534307 GUCY1A2P33402 732 aa16.96■□□□□ 0.31
SF3B2-215ENST00000534307 GCLCP48506 637 aaPredicted RBP16.96■□□□□ 0.31
SF3B2-215ENST00000534307 PRKCZQ05513 592 aa16.96■□□□□ 0.31
SF3B2-215ENST00000534307 KBTBD3Q8NAB2 608 aa16.96■□□□□ 0.31
SF3B2-215ENST00000534307 GPATCH3Q96I76 525 aa16.96■□□□□ 0.31
SF3B2-215ENST00000534307 C12orf42Q96LP6 360 aa16.96■□□□□ 0.31
SF3B2-215ENST00000534307 PUS7LQ9H0K6 701 aaKnown RBP16.96■□□□□ 0.31
SF3B2-215ENST00000534307 EMILIN3Q9NT22 766 aa16.96■□□□□ 0.31
SF3B2-215ENST00000534307 ATP8A2Q9NTI2 1148 aa16.96■□□□□ 0.31
SF3B2-215ENST00000534307 TAOK2Q9UL54 1235 aa16.96■□□□□ 0.31
SF3B2-215ENST00000534307 LAMA2P24043 3122 aaKnown RBP16.96■□□□□ 0.31
SF3B2-215ENST00000534307 ABCB5Q2M3G0 1257 aa16.95■□□□□ 0.3
SF3B2-215ENST00000534307 ZSCAN25Q6NSZ9 544 aa16.95■□□□□ 0.3
SF3B2-215ENST00000534307 PI4K2BQ8TCG2 481 aa16.95■□□□□ 0.3
SF3B2-215ENST00000534307 OTUD7AQ8TE49 926 aaPredicted RBP16.95■□□□□ 0.3
SF3B2-215ENST00000534307 TMOD4Q9NZQ9 345 aa16.95■□□□□ 0.3
SF3B2-215ENST00000534307 GABRQQ9UN88 632 aa16.95■□□□□ 0.3
SF3B2-215ENST00000534307 TTC41PQ6P2S7 1318 aa16.95■□□□□ 0.3
SF3B2-215ENST00000534307 SALL3Q9BXA9 1300 aa16.95■□□□□ 0.3
SF3B2-215ENST00000534307 DOCK3Q8IZD9 2030 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms