RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 RPUSD2Q8IZ73 545 aaKnown RBP13.52□□□□□ -0.24
AMBRA1-212ENST00000534300 F8W031 263 aaPredicted RBP13.52□□□□□ -0.24
AMBRA1-212ENST00000534300 CASQ2O14958 399 aaPredicted RBP13.52□□□□□ -0.24
AMBRA1-212ENST00000534300 PSMC4P43686 418 aa13.52□□□□□ -0.24
AMBRA1-212ENST00000534300 TAOK1Q7L7X3 1001 aa13.52□□□□□ -0.24
AMBRA1-212ENST00000534300 CCDC125Q86Z20 511 aa13.52□□□□□ -0.24
AMBRA1-212ENST00000534300 CEP120Q8N960 986 aa13.52□□□□□ -0.24
AMBRA1-212ENST00000534300 MCUR1Q96AQ8 359 aa13.52□□□□□ -0.24
AMBRA1-212ENST00000534300 RFC1P35251 1148 aaPredicted RBP13.52□□□□□ -0.25
AMBRA1-212ENST00000534300 TBC1D8BQ0IIM8 1120 aa13.52□□□□□ -0.25
AMBRA1-212ENST00000534300 ERCC6LQ2NKX8 1250 aa13.52□□□□□ -0.25
AMBRA1-212ENST00000534300 SH2D4BQ5SQS7 431 aa13.52□□□□□ -0.25
AMBRA1-212ENST00000534300 MLKLQ8NB16 471 aa13.52□□□□□ -0.25
AMBRA1-212ENST00000534300 TSC1Q92574 1164 aa13.52□□□□□ -0.25
AMBRA1-212ENST00000534300 PHACTR3Q96KR7 559 aa13.52□□□□□ -0.25
AMBRA1-212ENST00000534300 PTCH1Q13635 1447 aa13.52□□□□□ -0.25
AMBRA1-212ENST00000534300 PARD3Q8TEW0 1356 aa13.52□□□□□ -0.25
AMBRA1-212ENST00000534300 NMIQ13287 307 aaPredicted RBP13.52□□□□□ -0.25
AMBRA1-212ENST00000534300 SND1Q7KZF4 910 aaKnown RBP eCLIP13.52□□□□□ -0.25
AMBRA1-212ENST00000534300 RNF10Q8N5U6 811 aaKnown RBP13.52□□□□□ -0.25
AMBRA1-212ENST00000534300 LGR6Q9HBX8 967 aa13.52□□□□□ -0.25
AMBRA1-212ENST00000534300 PPIP5K2O43314 1243 aa13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 TMC4Q7Z404 712 aa13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 TMEM63CQ9P1W3 806 aa13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 ZNF215Q9UL58 517 aaPredicted RBP13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 BLMP54132 1417 aaPredicted RBP13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 TPD52P55327 224 aaPredicted RBP13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 MTMR3Q13615 1198 aa13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 VWA3BQ502W6 1294 aa13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 FAM182BQ5T319 152 aa13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 MED4Q9NPJ6 270 aa13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 USH1CQ9Y6N9 552 aa13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 CDC42BPBQ9Y5S2 1711 aa13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 EFCAB8A8MWE9 144 aa13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 NAA16Q6N069 864 aaPredicted RBP13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 CEP85Q6P2H3 762 aa13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 VAT1LQ9HCJ6 419 aa13.51□□□□□ -0.25
AMBRA1-212ENST00000534300 RNF17Q9BXT8 1623 aaKnown RBP13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 CDC42BPGQ6DT37 1551 aa13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 ATP8B1O43520 1251 aa13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 RASSF2P50749 326 aa13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 TCIRG1Q13488 830 aa13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 CC2D2BQ6DHV5 1058 aa13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 METTL22Q9BUU2 404 aaPredicted RBP13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 RABEP2Q9H5N1 569 aa13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 B4DLN1 442 aa13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 MRPL12P52815 198 aaKnown RBP13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 SEL1L2Q5TEA6 688 aa13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 RPAINQ86UA6 219 aa13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 JARID2Q92833 1246 aaPredicted RBP13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 ARHGEF2Q92974 986 aaKnown RBP13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 NUP58Q9BVL2 599 aa13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 IL6STP40189 918 aaPredicted RBP13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 ETF1P62495 437 aaKnown RBP13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 IFIT1BQ5T764 474 aaKnown RBP13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 SECISBP2LQ93073 1101 aaKnown RBP13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 FAM114A2Q9NRY5 505 aa13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 UTP11Q9Y3A2 253 aaKnown RBP13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 RBBP5Q15291 538 aaKnown RBP13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 KRT79Q5XKE5 535 aa13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 LLPHQ9BRT6 129 aaKnown RBP13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 TXNDC16Q9P2K2 825 aa13.5□□□□□ -0.25
AMBRA1-212ENST00000534300 E7EVH7 732 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 HIP1RO75146 1068 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 LDHBP07195 334 aaKnown RBP13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 CALM1P0DP23 149 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 CALM2P0DP24 149 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 CALM3P0DP25 149 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 APOBRQ0VD83 1088 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 CFAP157Q5JU67 520 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 CERS3Q8IU89 383 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 NOX5Q96PH1 765 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 CSRNP2Q9H175 543 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 TSKSQ9UJT2 592 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 CCT6AP40227 531 aaKnown RBP13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 BICD1Q96G01 975 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 GBP5Q96PP8 586 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 MRVI1Q9Y6F6 885 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 CRKLP46109 303 aaKnown RBP13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 MAP7Q14244 749 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 RILPL1Q5EBL4 403 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 HS2ST1Q7LGA3 356 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 RGS22Q8NE09 1264 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 DENND2AQ9ULE3 1009 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 EEF2P13639 858 aaKnown RBP13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 EAPPQ56P03 285 aaPredicted RBP13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 GKAP1Q5VSY0 366 aaPredicted RBP13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 CCDC62Q6P9F0 684 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 BCAS4Q8TDM0 211 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 LEO1Q8WVC0 666 aaPredicted RBP13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 SYNCQ9H7C4 482 aa13.49□□□□□ -0.25
AMBRA1-212ENST00000534300 KRT9P35527 623 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 NLRP12P59046 1061 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 CLUL1Q15846 466 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 ZNF365Q70YC5 407 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 GBP7Q8N8V2 638 aaPredicted RBP13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 C8orf58Q8NAV2 365 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms