RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 DIXDC1Q155Q3 683 aa13.39□□□□□ -0.27
CSDE1-215ENST00000533818 CSPP1Q1MSJ5 1256 aa13.39□□□□□ -0.27
CSDE1-215ENST00000533818 CCDC174Q6PII3 467 aa13.39□□□□□ -0.27
CSDE1-215ENST00000533818 LMBR1LQ6UX01 489 aa13.39□□□□□ -0.27
CSDE1-215ENST00000533818 SH3BP5LQ7L8J4 393 aa13.39□□□□□ -0.27
CSDE1-215ENST00000533818 CD320Q9NPF0 282 aa13.39□□□□□ -0.27
CSDE1-215ENST00000533818 RLFQ13129 1914 aa13.39□□□□□ -0.27
CSDE1-215ENST00000533818 PQBP1O60828 265 aaKnown RBP13.38□□□□□ -0.27
CSDE1-215ENST00000533818 ENTPD3O75355 529 aa13.38□□□□□ -0.27
CSDE1-215ENST00000533818 GLRX3O76003 335 aaKnown RBP13.38□□□□□ -0.27
CSDE1-215ENST00000533818 SH3D19Q5HYK7 790 aa13.38□□□□□ -0.27
CSDE1-215ENST00000533818 TMEM240Q5SV17 173 aa13.38□□□□□ -0.27
CSDE1-215ENST00000533818 RASIP1Q5U651 963 aa13.38□□□□□ -0.27
CSDE1-215ENST00000533818 SLC44A5Q8NCS7 719 aa13.38□□□□□ -0.27
CSDE1-215ENST00000533818 PAGR1Q9BTK6 254 aa13.38□□□□□ -0.27
CSDE1-215ENST00000533818 NDUFB9Q9Y6M9 179 aa13.38□□□□□ -0.27
CSDE1-215ENST00000533818 WDFY4Q6ZS81 3184 aa13.38□□□□□ -0.27
CSDE1-215ENST00000533818 FRMPD3Q5JV73 1810 aa13.37□□□□□ -0.27
CSDE1-215ENST00000533818 DDTLA6NHG4 134 aaPredicted RBP13.37□□□□□ -0.27
CSDE1-215ENST00000533818 HOXA7P31268 230 aaPredicted RBP13.37□□□□□ -0.27
CSDE1-215ENST00000533818 ZEB1P37275 1124 aaPredicted RBP13.37□□□□□ -0.27
CSDE1-215ENST00000533818 TRIM26Q12899 539 aaPredicted RBP13.37□□□□□ -0.27
CSDE1-215ENST00000533818 C16orf59Q7L2K0 433 aa13.37□□□□□ -0.27
CSDE1-215ENST00000533818 C8orf58Q8NAV2 365 aa13.37□□□□□ -0.27
CSDE1-215ENST00000533818 TBC1D2Q9BYX2 928 aa13.37□□□□□ -0.27
CSDE1-215ENST00000533818 A0A1B0GUL6 1792 aa13.37□□□□□ -0.27
CSDE1-215ENST00000533818 CYBAP13498 195 aa13.36□□□□□ -0.27
CSDE1-215ENST00000533818 PPIGQ13427 754 aaKnown RBP eCLIP13.36□□□□□ -0.27
CSDE1-215ENST00000533818 LRRC41Q15345 812 aa13.36□□□□□ -0.27
CSDE1-215ENST00000533818 HLA-CQ95604 372 aa13.36□□□□□ -0.27
CSDE1-215ENST00000533818 PHOX2BQ99453 314 aa13.36□□□□□ -0.27
CSDE1-215ENST00000533818 IDI2Q9BXS1 227 aa13.36□□□□□ -0.27
CSDE1-215ENST00000533818 PUS3Q9BZE2 481 aaKnown RBP13.36□□□□□ -0.27
CSDE1-215ENST00000533818 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.36□□□□□ -0.27
CSDE1-215ENST00000533818 TMOD4Q9NZQ9 345 aa13.36□□□□□ -0.27
CSDE1-215ENST00000533818 YBX2Q9Y2T7 364 aaKnown RBP13.36□□□□□ -0.27
CSDE1-215ENST00000533818 PLXNA1Q9UIW2 1896 aa13.36□□□□□ -0.27
CSDE1-215ENST00000533818 ZDBF2Q9HCK1 2354 aa13.35□□□□□ -0.27
CSDE1-215ENST00000533818 PHIPQ8WWQ0 1821 aa13.35□□□□□ -0.27
CSDE1-215ENST00000533818 SLC15A5A6NIM6 579 aa13.35□□□□□ -0.27
CSDE1-215ENST00000533818 USP17L5A8MUK1 530 aa13.35□□□□□ -0.27
CSDE1-215ENST00000533818 TIMP1P01033 207 aa13.35□□□□□ -0.27
CSDE1-215ENST00000533818 HOXC6P09630 235 aa13.35□□□□□ -0.27
CSDE1-215ENST00000533818 FAAP100Q0VG06 881 aa13.35□□□□□ -0.27
CSDE1-215ENST00000533818 WDR78Q5VTH9 848 aa13.35□□□□□ -0.27
CSDE1-215ENST00000533818 CCDC146Q8IYE0 955 aa13.35□□□□□ -0.27
CSDE1-215ENST00000533818 LINS1Q8NG48 757 aa13.35□□□□□ -0.27
CSDE1-215ENST00000533818 WDR66Q8TBY9 1149 aa13.35□□□□□ -0.27
CSDE1-215ENST00000533818 OSBPL5Q9H0X9 879 aaPredicted RBP13.35□□□□□ -0.27
CSDE1-215ENST00000533818 CFAP54Q96N23 3096 aa13.35□□□□□ -0.27
CSDE1-215ENST00000533818 FAM196BA6NMK8 535 aa13.34□□□□□ -0.27
CSDE1-215ENST00000533818 DCDC2CA8MYV0 355 aa13.34□□□□□ -0.27
CSDE1-215ENST00000533818 SEPT4O43236 478 aa13.34□□□□□ -0.27
CSDE1-215ENST00000533818 GTPBP6O43824 516 aaPredicted RBP13.34□□□□□ -0.27
CSDE1-215ENST00000533818 ZNF853P0CG23 659 aa13.34□□□□□ -0.27
CSDE1-215ENST00000533818 ALADP13716 330 aa13.34□□□□□ -0.27
CSDE1-215ENST00000533818 PTPREP23469 700 aa13.34□□□□□ -0.27
CSDE1-215ENST00000533818 EPHA10Q5JZY3 1008 aa13.34□□□□□ -0.27
CSDE1-215ENST00000533818 MFSD5Q6N075 450 aa13.34□□□□□ -0.27
CSDE1-215ENST00000533818 ZNF365Q70YC5 407 aa13.34□□□□□ -0.27
CSDE1-215ENST00000533818 NPLOC4Q8TAT6 608 aa13.34□□□□□ -0.27
CSDE1-215ENST00000533818 STK31Q9BXU1 1019 aa13.34□□□□□ -0.27
CSDE1-215ENST00000533818 PHF24Q9UPV7 400 aa13.34□□□□□ -0.27
CSDE1-215ENST00000533818 MTCH2Q9Y6C9 303 aa13.34□□□□□ -0.27
CSDE1-215ENST00000533818 DOCK1Q14185 1865 aa13.33□□□□□ -0.27
CSDE1-215ENST00000533818 TBC1D12O60347 775 aa13.33□□□□□ -0.28
CSDE1-215ENST00000533818 CCNA1P78396 465 aa13.33□□□□□ -0.28
CSDE1-215ENST00000533818 MTMR2Q13614 643 aa13.33□□□□□ -0.28
CSDE1-215ENST00000533818 PPP2R2DQ66LE6 453 aa13.33□□□□□ -0.28
CSDE1-215ENST00000533818 G2E3Q7L622 706 aa13.33□□□□□ -0.28
CSDE1-215ENST00000533818 GJD3Q8N144 294 aa13.33□□□□□ -0.28
CSDE1-215ENST00000533818 GTF3C2Q8WUA4 911 aaPredicted RBP13.33□□□□□ -0.28
CSDE1-215ENST00000533818 AS3MTQ9HBK9 375 aa13.33□□□□□ -0.28
CSDE1-215ENST00000533818 IVNS1ABPQ9Y6Y0 642 aa13.33□□□□□ -0.28
CSDE1-215ENST00000533818 MROH5Q6ZUA9 1318 aa13.33□□□□□ -0.28
CSDE1-215ENST00000533818 CLSPNQ9HAW4 1339 aa13.33□□□□□ -0.28
CSDE1-215ENST00000533818 LOC285556D6RIA3 1793 aa13.32□□□□□ -0.28
CSDE1-215ENST00000533818 ACRP10323 421 aa13.32□□□□□ -0.28
CSDE1-215ENST00000533818 CSF2RAP15509 400 aa13.32□□□□□ -0.28
CSDE1-215ENST00000533818 POU3F3P20264 500 aaPredicted RBP13.32□□□□□ -0.28
CSDE1-215ENST00000533818 BACE1P56817 501 aa13.32□□□□□ -0.28
CSDE1-215ENST00000533818 PICALMQ13492 652 aa13.32□□□□□ -0.28
CSDE1-215ENST00000533818 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
CSDE1-215ENST00000533818 PSRC1Q6PGN9 363 aaPredicted RBP13.32□□□□□ -0.28
CSDE1-215ENST00000533818 ANKRD33Q7Z3H0 272 aa13.32□□□□□ -0.28
CSDE1-215ENST00000533818 TOX2Q96NM4 488 aa13.32□□□□□ -0.28
CSDE1-215ENST00000533818 LRRC37A2A6NM11 1700 aa13.32□□□□□ -0.28
CSDE1-215ENST00000533818 RFXAPO00287 272 aa13.31□□□□□ -0.28
CSDE1-215ENST00000533818 IGHA2P01877 340 aa13.31□□□□□ -0.28
CSDE1-215ENST00000533818 LDHBP07195 334 aaKnown RBP13.31□□□□□ -0.28
CSDE1-215ENST00000533818 SLC5A1P13866 664 aa13.31□□□□□ -0.28
CSDE1-215ENST00000533818 PRDX5P30044 214 aa13.31□□□□□ -0.28
CSDE1-215ENST00000533818 CAP2P40123 477 aa13.31□□□□□ -0.28
CSDE1-215ENST00000533818 FAM47AQ5JRC9 791 aa13.31□□□□□ -0.28
CSDE1-215ENST00000533818 DNAAF4Q8WXU2 420 aa13.31□□□□□ -0.28
CSDE1-215ENST00000533818 WDR18Q9BV38 432 aa13.31□□□□□ -0.28
CSDE1-215ENST00000533818 DDX4Q9NQI0 724 aaKnown RBP13.31□□□□□ -0.28
CSDE1-215ENST00000533818 RABGAP1Q9Y3P9 1069 aa13.31□□□□□ -0.28
CSDE1-215ENST00000533818 ZNF521Q96K83 1311 aa13.31□□□□□ -0.28
CSDE1-215ENST00000533818 TRANK1O15050 2925 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms