RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 AKR1B1P15121 316 aa14.09□□□□□ -0.15
COMMD9-208ENST00000533643 INPP5BP32019 993 aa14.09□□□□□ -0.15
COMMD9-208ENST00000533643 TRDNQ13061 729 aa14.09□□□□□ -0.15
COMMD9-208ENST00000533643 SHROOM1Q2M3G4 852 aaPredicted RBP14.09□□□□□ -0.15
COMMD9-208ENST00000533643 FAM47AQ5JRC9 791 aa14.09□□□□□ -0.15
COMMD9-208ENST00000533643 MB21D2Q8IYB1 491 aaPredicted RBP14.09□□□□□ -0.15
COMMD9-208ENST00000533643 NCOA7Q8NI08 942 aa14.09□□□□□ -0.15
COMMD9-208ENST00000533643 CCDC17Q96LX7 622 aa14.09□□□□□ -0.15
COMMD9-208ENST00000533643 JAKMIP1Q96N16 626 aaKnown RBP14.09□□□□□ -0.15
COMMD9-208ENST00000533643 WRNIP1Q96S55 665 aa14.09□□□□□ -0.15
COMMD9-208ENST00000533643 KIF2CQ99661 725 aa14.09□□□□□ -0.15
COMMD9-208ENST00000533643 UBE2Q2LH0YL09 131 aa14.08□□□□□ -0.16
COMMD9-208ENST00000533643 CTNND1O60716 968 aaKnown RBP14.08□□□□□ -0.16
COMMD9-208ENST00000533643 KDM4AO75164 1064 aa14.08□□□□□ -0.16
COMMD9-208ENST00000533643 GDF11O95390 407 aa14.08□□□□□ -0.16
COMMD9-208ENST00000533643 CAP2P40123 477 aa14.08□□□□□ -0.16
COMMD9-208ENST00000533643 IREB2P48200 963 aaKnown RBP14.08□□□□□ -0.16
COMMD9-208ENST00000533643 TFAP4Q01664 338 aa14.08□□□□□ -0.16
COMMD9-208ENST00000533643 TTLL12Q14166 644 aaPredicted RBP14.08□□□□□ -0.16
COMMD9-208ENST00000533643 MAP3K11Q16584 847 aa14.08□□□□□ -0.16
COMMD9-208ENST00000533643 CYB5R4Q7L1T6 521 aa14.08□□□□□ -0.16
COMMD9-208ENST00000533643 RALYLQ86SE5 291 aaKnown RBP14.08□□□□□ -0.16
COMMD9-208ENST00000533643 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.08□□□□□ -0.16
COMMD9-208ENST00000533643 ESR2Q92731 530 aa14.08□□□□□ -0.16
COMMD9-208ENST00000533643 NEK1Q96PY6 1258 aa14.08□□□□□ -0.16
COMMD9-208ENST00000533643 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.08□□□□□ -0.16
COMMD9-208ENST00000533643 TM6SF1Q9BZW5 370 aa14.08□□□□□ -0.16
COMMD9-208ENST00000533643 ZSWIM5Q9P217 1185 aa14.08□□□□□ -0.16
COMMD9-208ENST00000533643 ANGEL1Q9UNK9 670 aaKnown RBP14.08□□□□□ -0.16
COMMD9-208ENST00000533643 GH2P01242 217 aa14.07□□□□□ -0.16
COMMD9-208ENST00000533643 CPA1P15085 419 aa14.07□□□□□ -0.16
COMMD9-208ENST00000533643 PSMA5P28066 241 aa14.07□□□□□ -0.16
COMMD9-208ENST00000533643 ANTXR2P58335 489 aa14.07□□□□□ -0.16
COMMD9-208ENST00000533643 MAP3K9P80192 1104 aa14.07□□□□□ -0.16
COMMD9-208ENST00000533643 ABCB5Q2M3G0 1257 aa14.07□□□□□ -0.16
COMMD9-208ENST00000533643 LDLRAD1Q5T700 205 aa14.07□□□□□ -0.16
COMMD9-208ENST00000533643 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.07□□□□□ -0.16
COMMD9-208ENST00000533643 ARMC9Q7Z3E5 817 aa14.07□□□□□ -0.16
COMMD9-208ENST00000533643 C2orf69Q8N8R5 385 aa14.07□□□□□ -0.16
COMMD9-208ENST00000533643 NEDD1Q8NHV4 660 aa14.07□□□□□ -0.16
COMMD9-208ENST00000533643 ZKSCAN4Q969J2 545 aaPredicted RBP14.07□□□□□ -0.16
COMMD9-208ENST00000533643 GBA2Q9HCG7 927 aaPredicted RBP14.07□□□□□ -0.16
COMMD9-208ENST00000533643 ZSWIM6Q9HCJ5 1215 aa14.07□□□□□ -0.16
COMMD9-208ENST00000533643 IGKV6D-41A0A0C4DH26 115 aa14.06□□□□□ -0.16
COMMD9-208ENST00000533643 TSPY2A6NKD2 308 aa14.06□□□□□ -0.16
COMMD9-208ENST00000533643 MPHOSPH10O00566 681 aaKnown RBP14.06□□□□□ -0.16
COMMD9-208ENST00000533643 TSPY3P0CV98 308 aa14.06□□□□□ -0.16
COMMD9-208ENST00000533643 TSPY8P0CW00 308 aa14.06□□□□□ -0.16
COMMD9-208ENST00000533643 CASTP20810 708 aaKnown RBP14.06□□□□□ -0.16
COMMD9-208ENST00000533643 GUCY1A2P33402 732 aa14.06□□□□□ -0.16
COMMD9-208ENST00000533643 NT5C2P49902 561 aa14.06□□□□□ -0.16
COMMD9-208ENST00000533643 FKBP1BP68106 108 aa14.06□□□□□ -0.16
COMMD9-208ENST00000533643 EXOSC10Q01780 885 aaKnown RBP14.06□□□□□ -0.16
COMMD9-208ENST00000533643 NOL9Q5SY16 702 aaKnown RBP14.06□□□□□ -0.16
COMMD9-208ENST00000533643 CHST3Q7LGC8 479 aa14.06□□□□□ -0.16
COMMD9-208ENST00000533643 IL17RBQ9NRM6 502 aa14.06□□□□□ -0.16
COMMD9-208ENST00000533643 GINM1Q9NU53 330 aa14.06□□□□□ -0.16
COMMD9-208ENST00000533643 ZBTB21Q9ULJ3 1066 aa14.06□□□□□ -0.16
COMMD9-208ENST00000533643 PLIN4Q96Q06 1357 aa14.06□□□□□ -0.16
COMMD9-208ENST00000533643 PRC1O43663 620 aa14.05□□□□□ -0.16
COMMD9-208ENST00000533643 NMT2O60551 498 aa14.05□□□□□ -0.16
COMMD9-208ENST00000533643 HMGB1P09429 215 aaKnown RBP14.05□□□□□ -0.16
COMMD9-208ENST00000533643 RPS6KB1P23443 525 aa14.05□□□□□ -0.16
COMMD9-208ENST00000533643 MCM5P33992 734 aa14.05□□□□□ -0.16
COMMD9-208ENST00000533643 VGLL4Q14135 290 aa14.05□□□□□ -0.16
COMMD9-208ENST00000533643 SEPT2Q15019 361 aa14.05□□□□□ -0.16
COMMD9-208ENST00000533643 BLOC1S2Q6QNY1 142 aa14.05□□□□□ -0.16
COMMD9-208ENST00000533643 TMEM179Q6ZVK1 233 aa14.05□□□□□ -0.16
COMMD9-208ENST00000533643 RUFY3Q7L099 469 aa14.05□□□□□ -0.16
COMMD9-208ENST00000533643 DHX32Q7L7V1 743 aaKnown RBP14.05□□□□□ -0.16
COMMD9-208ENST00000533643 SCYL3Q8IZE3 742 aa14.05□□□□□ -0.16
COMMD9-208ENST00000533643 CLMNQ96JQ2 1002 aa14.05□□□□□ -0.16
COMMD9-208ENST00000533643 ZKSCAN3Q9BRR0 538 aa14.05□□□□□ -0.16
COMMD9-208ENST00000533643 UPF3BQ9BZI7 483 aaKnown RBP14.05□□□□□ -0.16
COMMD9-208ENST00000533643 CABP5Q9NP86 173 aa14.05□□□□□ -0.16
COMMD9-208ENST00000533643 TCP11L1Q9NUJ3 509 aa14.05□□□□□ -0.16
COMMD9-208ENST00000533643 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.05□□□□□ -0.16
COMMD9-208ENST00000533643 CYP46A1Q9Y6A2 500 aa14.05□□□□□ -0.16
COMMD9-208ENST00000533643 PAPPA2Q9BXP8 1791 aa14.04□□□□□ -0.16
COMMD9-208ENST00000533643 UNCXA6NJT0 531 aa14.04□□□□□ -0.16
COMMD9-208ENST00000533643 ASNSP08243 561 aa14.04□□□□□ -0.16
COMMD9-208ENST00000533643 RAB3GAP1Q15042 981 aa14.04□□□□□ -0.16
COMMD9-208ENST00000533643 CLEC10AQ8IUN9 316 aa14.04□□□□□ -0.16
COMMD9-208ENST00000533643 SIAH1Q8IUQ4 282 aa14.04□□□□□ -0.16
COMMD9-208ENST00000533643 ANKRD13AQ8IZ07 590 aa14.04□□□□□ -0.16
COMMD9-208ENST00000533643 ZSCAN10Q96SZ4 725 aaPredicted RBP14.04□□□□□ -0.16
COMMD9-208ENST00000533643 LRRC2Q9BYS8 371 aa14.04□□□□□ -0.16
COMMD9-208ENST00000533643 PICK1Q9NRD5 415 aa14.04□□□□□ -0.16
COMMD9-208ENST00000533643 MTMR4Q9NYA4 1195 aa14.04□□□□□ -0.16
COMMD9-208ENST00000533643 CSADQ9Y600 493 aa14.04□□□□□ -0.16
COMMD9-208ENST00000533643 SNCAIPQ9Y6H5 919 aa14.04□□□□□ -0.16
COMMD9-208ENST00000533643 PTPRAP18433 802 aa14.03□□□□□ -0.16
COMMD9-208ENST00000533643 CCDC84Q86UT8 332 aaPredicted RBP14.03□□□□□ -0.16
COMMD9-208ENST00000533643 IQCA1Q86XH1 822 aa14.03□□□□□ -0.16
COMMD9-208ENST00000533643 IGDCC4Q8TDY8 1250 aa14.03□□□□□ -0.16
COMMD9-208ENST00000533643 CEP95Q96GE4 821 aa14.03□□□□□ -0.16
COMMD9-208ENST00000533643 TCEANC2Q96MN5 208 aa14.03□□□□□ -0.16
COMMD9-208ENST00000533643 UBAC1Q9BSL1 405 aa14.03□□□□□ -0.16
COMMD9-208ENST00000533643 KANSL2Q9H9L4 492 aa14.03□□□□□ -0.16
COMMD9-208ENST00000533643 ELP3Q9H9T3 547 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms