RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 SHROOM1Q2M3G4 852 aaPredicted RBP20.68■□□□□ 0.9
NXF1-216ENST00000533499 FAM47AQ5JRC9 791 aa20.68■□□□□ 0.9
NXF1-216ENST00000533499 TATDN1Q6P1N9 297 aa20.68■□□□□ 0.9
NXF1-216ENST00000533499 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.68■□□□□ 0.9
NXF1-216ENST00000533499 SAPCD2Q86UD0 394 aa20.68■□□□□ 0.9
NXF1-216ENST00000533499 NBPF3Q9H094 633 aa20.68■□□□□ 0.9
NXF1-216ENST00000533499 CREBZFQ9NS37 354 aa20.68■□□□□ 0.9
NXF1-216ENST00000533499 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.68■□□□□ 0.9
NXF1-216ENST00000533499 ZNF112Q9UJU3 913 aa20.68■□□□□ 0.9
NXF1-216ENST00000533499 TLL2Q9Y6L7 1015 aa20.68■□□□□ 0.9
NXF1-216ENST00000533499 LAMA4Q16363 1823 aa20.68■□□□□ 0.9
NXF1-216ENST00000533499 OTOFQ9HC10 1997 aa20.67■□□□□ 0.9
NXF1-216ENST00000533499 AKR1B1P15121 316 aa20.67■□□□□ 0.9
NXF1-216ENST00000533499 RASA1P20936 1047 aa20.67■□□□□ 0.9
NXF1-216ENST00000533499 MKRN3Q13064 507 aaKnown RBP20.67■□□□□ 0.9
NXF1-216ENST00000533499 RAB3GAP1Q15042 981 aa20.67■□□□□ 0.9
NXF1-216ENST00000533499 MAP3K11Q16584 847 aa20.67■□□□□ 0.9
NXF1-216ENST00000533499 CCDC84Q86UT8 332 aaPredicted RBP20.67■□□□□ 0.9
NXF1-216ENST00000533499 SCYL3Q8IZE3 742 aa20.67■□□□□ 0.9
NXF1-216ENST00000533499 TSPY2A6NKD2 308 aa20.66■□□□□ 0.9
NXF1-216ENST00000533499 TSPY3P0CV98 308 aa20.66■□□□□ 0.9
NXF1-216ENST00000533499 TSPY8P0CW00 308 aa20.66■□□□□ 0.9
NXF1-216ENST00000533499 ZKSCAN1P17029 563 aaPredicted RBP20.66■□□□□ 0.9
NXF1-216ENST00000533499 ATP2B2Q01814 1243 aa20.66■□□□□ 0.9
NXF1-216ENST00000533499 TRDNQ13061 729 aa20.66■□□□□ 0.9
NXF1-216ENST00000533499 NECTIN1Q15223 517 aa20.66■□□□□ 0.9
NXF1-216ENST00000533499 LDLRAD1Q5T700 205 aa20.66■□□□□ 0.9
NXF1-216ENST00000533499 RALYLQ86SE5 291 aaKnown RBP20.66■□□□□ 0.9
NXF1-216ENST00000533499 STAG1Q8WVM7 1258 aa20.66■□□□□ 0.9
NXF1-216ENST00000533499 USP26Q9BXU7 913 aa20.66■□□□□ 0.9
NXF1-216ENST00000533499 ZBTB21Q9ULJ3 1066 aa20.66■□□□□ 0.9
NXF1-216ENST00000533499 TACC3Q9Y6A5 838 aa20.66■□□□□ 0.9
NXF1-216ENST00000533499 SNCAIPQ9Y6H5 919 aa20.66■□□□□ 0.9
NXF1-216ENST00000533499 TAF6LQ9Y6J9 622 aa20.66■□□□□ 0.9
NXF1-216ENST00000533499 NEDD4P46934 1319 aa20.66■□□□□ 0.9
NXF1-216ENST00000533499 ATAD5Q96QE3 1844 aa20.65■□□□□ 0.9
NXF1-216ENST00000533499 JAG1P78504 1218 aa20.65■□□□□ 0.9
NXF1-216ENST00000533499 TFAP4Q01664 338 aa20.65■□□□□ 0.9
NXF1-216ENST00000533499 RGMBQ6NW40 437 aa20.65■□□□□ 0.9
NXF1-216ENST00000533499 CNKSR2Q8WXI2 1034 aa20.65■□□□□ 0.9
NXF1-216ENST00000533499 OTUD5Q96G74 571 aa20.65■□□□□ 0.9
NXF1-216ENST00000533499 CCDC17Q96LX7 622 aa20.65■□□□□ 0.9
NXF1-216ENST00000533499 TAOK2Q9UL54 1235 aa20.65■□□□□ 0.9
NXF1-216ENST00000533499 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.65■□□□□ 0.9
NXF1-216ENST00000533499 DOCK1Q14185 1865 aa20.64■□□□□ 0.9
NXF1-216ENST00000533499 B4E1Z4 1266 aa20.64■□□□□ 0.89
NXF1-216ENST00000533499 E7EWF7 191 aa20.64■□□□□ 0.89
NXF1-216ENST00000533499 ORC4O43929 436 aa20.64■□□□□ 0.89
NXF1-216ENST00000533499 ASNSP08243 561 aa20.64■□□□□ 0.89
NXF1-216ENST00000533499 HSPA6P17066 643 aa20.64■□□□□ 0.89
NXF1-216ENST00000533499 SEPT2Q15019 361 aa20.64■□□□□ 0.89
NXF1-216ENST00000533499 DEFB115Q30KQ5 88 aa20.64■□□□□ 0.89
NXF1-216ENST00000533499 ESR2Q92731 530 aa20.64■□□□□ 0.89
NXF1-216ENST00000533499 KRT23Q9C075 422 aa20.64■□□□□ 0.89
NXF1-216ENST00000533499 ZHX2Q9Y6X8 837 aa20.64■□□□□ 0.89
NXF1-216ENST00000533499 KDM4AO75164 1064 aa20.63■□□□□ 0.89
NXF1-216ENST00000533499 PCP11498 1178 aaKnown RBP20.63■□□□□ 0.89
NXF1-216ENST00000533499 HSPA4P34932 840 aa20.63■□□□□ 0.89
NXF1-216ENST00000533499 NOL9Q5SY16 702 aaKnown RBP20.63■□□□□ 0.89
NXF1-216ENST00000533499 TMEM179Q6ZVK1 233 aa20.63■□□□□ 0.89
NXF1-216ENST00000533499 CLEC10AQ8IUN9 316 aa20.63■□□□□ 0.89
NXF1-216ENST00000533499 OPTNQ96CV9 577 aa20.63■□□□□ 0.89
NXF1-216ENST00000533499 CNNM2Q9H8M5 875 aa20.63■□□□□ 0.89
NXF1-216ENST00000533499 UPF2Q9HAU5 1272 aaKnown RBP20.63■□□□□ 0.89
NXF1-216ENST00000533499 USP17L5A8MUK1 530 aa20.62■□□□□ 0.89
NXF1-216ENST00000533499 PTPRAP18433 802 aa20.62■□□□□ 0.89
NXF1-216ENST00000533499 CYP4F22Q6NT55 531 aa20.62■□□□□ 0.89
NXF1-216ENST00000533499 STOX1Q6ZVD7 989 aa20.62■□□□□ 0.89
NXF1-216ENST00000533499 ERO1BQ86YB8 467 aa20.62■□□□□ 0.89
NXF1-216ENST00000533499 RASEFQ8IZ41 740 aa20.62■□□□□ 0.89
NXF1-216ENST00000533499 NCOA7Q8NI08 942 aa20.62■□□□□ 0.89
NXF1-216ENST00000533499 WNK4Q96J92 1243 aa20.61■□□□□ 0.89
NXF1-216ENST00000533499 FEZ1Q99689 392 aa20.61■□□□□ 0.89
NXF1-216ENST00000533499 ZKSCAN3Q9BRR0 538 aa20.61■□□□□ 0.89
NXF1-216ENST00000533499 AS3MTQ9HBK9 375 aa20.61■□□□□ 0.89
NXF1-216ENST00000533499 SPDYE5A6NIY4 337 aa20.6■□□□□ 0.89
NXF1-216ENST00000533499 UNCXA6NJT0 531 aa20.6■□□□□ 0.89
NXF1-216ENST00000533499 TRIM75PA6NK02 468 aa20.6■□□□□ 0.89
NXF1-216ENST00000533499 RAD21O60216 631 aa20.6■□□□□ 0.89
NXF1-216ENST00000533499 FGRP09769 529 aa20.6■□□□□ 0.89
NXF1-216ENST00000533499 ICA1Q05084 483 aa20.6■□□□□ 0.89
NXF1-216ENST00000533499 RASAL3Q86YV0 1011 aa20.6■□□□□ 0.89
NXF1-216ENST00000533499 NEDD1Q8NHV4 660 aa20.6■□□□□ 0.89
NXF1-216ENST00000533499 GINM1Q9NU53 330 aa20.6■□□□□ 0.89
NXF1-216ENST00000533499 SNX14Q9Y5W7 946 aa20.6■□□□□ 0.89
NXF1-216ENST00000533499 EPB41L2O43491 1005 aaKnown RBP20.59■□□□□ 0.89
NXF1-216ENST00000533499 NMT2O60551 498 aa20.59■□□□□ 0.89
NXF1-216ENST00000533499 GUCY1A2P33402 732 aa20.59■□□□□ 0.89
NXF1-216ENST00000533499 SPP2Q13103 211 aa20.59■□□□□ 0.89
NXF1-216ENST00000533499 KRT32Q14532 448 aa20.59■□□□□ 0.89
NXF1-216ENST00000533499 ZYXQ15942 572 aaKnown RBP20.59■□□□□ 0.89
NXF1-216ENST00000533499 CHST3Q7LGC8 479 aa20.59■□□□□ 0.89
NXF1-216ENST00000533499 NKX2-3Q8TAU0 364 aa20.59■□□□□ 0.89
NXF1-216ENST00000533499 CCDC102AQ96A19 550 aa20.59■□□□□ 0.89
NXF1-216ENST00000533499 CAPNS2Q96L46 248 aa20.59■□□□□ 0.89
NXF1-216ENST00000533499 JAKMIP1Q96N16 626 aaKnown RBP20.59■□□□□ 0.89
NXF1-216ENST00000533499 BACH2Q9BYV9 841 aa20.59■□□□□ 0.89
NXF1-216ENST00000533499 RASSF10A6NK89 507 aa20.58■□□□□ 0.89
NXF1-216ENST00000533499 ECE1P42892 770 aa20.58■□□□□ 0.89
NXF1-216ENST00000533499 PPATQ06203 517 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms