RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 HLA-DOAP06340 250 aa13.75□□□□□ -0.21
CLCF1-202ENST00000533438 CAPN2P17655 700 aa13.75□□□□□ -0.21
CLCF1-202ENST00000533438 GRK4P32298 578 aa13.75□□□□□ -0.21
CLCF1-202ENST00000533438 PDE3AQ14432 1141 aa13.75□□□□□ -0.21
CLCF1-202ENST00000533438 TTF1Q15361 905 aaPredicted RBP13.75□□□□□ -0.21
CLCF1-202ENST00000533438 FAM110CQ1W6H9 321 aa13.75□□□□□ -0.21
CLCF1-202ENST00000533438 SHROOM1Q2M3G4 852 aaPredicted RBP13.75□□□□□ -0.21
CLCF1-202ENST00000533438 SLC4A8Q2Y0W8 1093 aa13.75□□□□□ -0.21
CLCF1-202ENST00000533438 C20orf194Q5TEA3 1177 aa13.75□□□□□ -0.21
CLCF1-202ENST00000533438 CRACR2BQ8N4Y2 399 aaPredicted RBP13.75□□□□□ -0.21
CLCF1-202ENST00000533438 ANKRD13CQ8N6S4 541 aa13.75□□□□□ -0.21
CLCF1-202ENST00000533438 RAET1EQ8TD07 263 aa13.75□□□□□ -0.21
CLCF1-202ENST00000533438 RIOK1Q9BRS2 568 aaKnown RBP13.75□□□□□ -0.21
CLCF1-202ENST00000533438 PLXNB2O15031 1838 aa13.74□□□□□ -0.21
CLCF1-202ENST00000533438 H0YGN5 161 aa13.74□□□□□ -0.21
CLCF1-202ENST00000533438 APBB1O00213 710 aa13.74□□□□□ -0.21
CLCF1-202ENST00000533438 GDF11O95390 407 aa13.74□□□□□ -0.21
CLCF1-202ENST00000533438 MYCP01106 439 aaPredicted RBP13.74□□□□□ -0.21
CLCF1-202ENST00000533438 IFIT2P09913 472 aaKnown RBP13.74□□□□□ -0.21
CLCF1-202ENST00000533438 USP5P45974 858 aa13.74□□□□□ -0.21
CLCF1-202ENST00000533438 BACE1P56817 501 aa13.74□□□□□ -0.21
CLCF1-202ENST00000533438 PABPC4Q13310 644 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLCF1-202ENST00000533438 MTMR2Q13614 643 aa13.74□□□□□ -0.21
CLCF1-202ENST00000533438 MTFR1Q15390 333 aa13.74□□□□□ -0.21
CLCF1-202ENST00000533438 TATDN1Q6P1N9 297 aa13.74□□□□□ -0.21
CLCF1-202ENST00000533438 TRIM34Q9BYJ4 488 aa13.74□□□□□ -0.21
CLCF1-202ENST00000533438 ASCC2Q9H1I8 757 aaPredicted RBP13.74□□□□□ -0.21
CLCF1-202ENST00000533438 EHD4Q9H223 541 aa13.74□□□□□ -0.21
CLCF1-202ENST00000533438 ZBTB21Q9ULJ3 1066 aa13.74□□□□□ -0.21
CLCF1-202ENST00000533438 SUPT16HQ9Y5B9 1047 aaKnown RBP13.74□□□□□ -0.21
CLCF1-202ENST00000533438 C19orf81C9J6K1 198 aa13.73□□□□□ -0.21
CLCF1-202ENST00000533438 GCLCP48506 637 aaPredicted RBP13.73□□□□□ -0.21
CLCF1-202ENST00000533438 IRF5Q13568 498 aa13.73□□□□□ -0.21
CLCF1-202ENST00000533438 SLAIN1Q8ND83 568 aa13.73□□□□□ -0.21
CLCF1-202ENST00000533438 NKX2-3Q8TAU0 364 aa13.73□□□□□ -0.21
CLCF1-202ENST00000533438 A0A0C4DFX4 3053 aa13.72□□□□□ -0.21
CLCF1-202ENST00000533438 TCRBV5S4A2TA0A5A2 114 aa13.72□□□□□ -0.21
CLCF1-202ENST00000533438 USP17L10C9JJH3 530 aa13.72□□□□□ -0.21
CLCF1-202ENST00000533438 GOLIM4O00461 696 aa13.72□□□□□ -0.21
CLCF1-202ENST00000533438 TNPO2O14787 897 aaKnown RBP13.72□□□□□ -0.21
CLCF1-202ENST00000533438 PDE6AP16499 860 aa13.72□□□□□ -0.21
CLCF1-202ENST00000533438 HOXA7P31268 230 aaPredicted RBP13.72□□□□□ -0.21
CLCF1-202ENST00000533438 GJA8P48165 433 aa13.72□□□□□ -0.21
CLCF1-202ENST00000533438 FLT3LGP49771 235 aa13.72□□□□□ -0.21
CLCF1-202ENST00000533438 RRP1P56182 461 aaKnown RBP13.72□□□□□ -0.21
CLCF1-202ENST00000533438 SLC9C2Q5TAH2 1124 aa13.72□□□□□ -0.21
CLCF1-202ENST00000533438 SHISA4Q96DD7 197 aa13.72□□□□□ -0.21
CLCF1-202ENST00000533438 EDC3Q96F86 508 aaKnown RBP13.72□□□□□ -0.21
CLCF1-202ENST00000533438 SERPINB13Q9UIV8 391 aa13.72□□□□□ -0.21
CLCF1-202ENST00000533438 MYH8P13535 1937 aa13.72□□□□□ -0.21
CLCF1-202ENST00000533438 ZNF532Q9HCE3 1301 aa13.71□□□□□ -0.21
CLCF1-202ENST00000533438 BAZ2AQ9UIF9 1905 aaKnown RBP13.71□□□□□ -0.21
CLCF1-202ENST00000533438 MAGEB6P1A0A0J9YX57 407 aa13.71□□□□□ -0.21
CLCF1-202ENST00000533438 ADCY3O60266 1144 aa13.71□□□□□ -0.21
CLCF1-202ENST00000533438 GJB1P08034 283 aa13.71□□□□□ -0.21
CLCF1-202ENST00000533438 ATP5JP18859 108 aa13.71□□□□□ -0.21
CLCF1-202ENST00000533438 PLCD1P51178 756 aa13.71□□□□□ -0.21
CLCF1-202ENST00000533438 TTC6Q86TZ1 520 aa13.71□□□□□ -0.21
CLCF1-202ENST00000533438 PXYLP1Q8TE99 480 aa13.71□□□□□ -0.21
CLCF1-202ENST00000533438 DNAJC2Q99543 621 aaKnown RBP13.71□□□□□ -0.21
CLCF1-202ENST00000533438 TMOD4Q9NZQ9 345 aa13.71□□□□□ -0.21
CLCF1-202ENST00000533438 MORF4L1Q9UBU8 362 aa13.71□□□□□ -0.21
CLCF1-202ENST00000533438 GH2P01242 217 aa13.7□□□□□ -0.22
CLCF1-202ENST00000533438 CCL5P13501 91 aa13.7□□□□□ -0.22
CLCF1-202ENST00000533438 SHMT1P34896 483 aa13.7□□□□□ -0.22
CLCF1-202ENST00000533438 UBXN2AP68543 259 aa13.7□□□□□ -0.22
CLCF1-202ENST00000533438 GABPAQ06546 454 aa13.7□□□□□ -0.22
CLCF1-202ENST00000533438 COA7Q96BR5 231 aa13.7□□□□□ -0.22
CLCF1-202ENST00000533438 BOLA2Q9H3K6 86 aa13.7□□□□□ -0.22
CLCF1-202ENST00000533438 EMILIN3Q9NT22 766 aa13.7□□□□□ -0.22
CLCF1-202ENST00000533438 PAG1Q9NWQ8 432 aa13.7□□□□□ -0.22
CLCF1-202ENST00000533438 ELNP15502 786 aa13.69□□□□□ -0.22
CLCF1-202ENST00000533438 ADD2P35612 726 aa13.69□□□□□ -0.22
CLCF1-202ENST00000533438 IRX3P78415 501 aaPredicted RBP13.69□□□□□ -0.22
CLCF1-202ENST00000533438 CERKLQ49MI3 558 aaPredicted RBP13.69□□□□□ -0.22
CLCF1-202ENST00000533438 LCORLQ8N3X6 602 aa13.69□□□□□ -0.22
CLCF1-202ENST00000533438 C12orf42Q96LP6 360 aa13.69□□□□□ -0.22
CLCF1-202ENST00000533438 P2RX7Q99572 595 aaKnown RBP13.69□□□□□ -0.22
CLCF1-202ENST00000533438 HAUS7Q99871 368 aa13.69□□□□□ -0.22
CLCF1-202ENST00000533438 CRNKL1Q9BZJ0 848 aaKnown RBP13.69□□□□□ -0.22
CLCF1-202ENST00000533438 LRRCC1Q9C099 1032 aa13.69□□□□□ -0.22
CLCF1-202ENST00000533438 RNF208Q9H0X6 261 aa13.69□□□□□ -0.22
CLCF1-202ENST00000533438 BIN2Q9UBW5 565 aaPredicted RBP13.69□□□□□ -0.22
CLCF1-202ENST00000533438 INHAP05111 366 aa13.68□□□□□ -0.22
CLCF1-202ENST00000533438 POLR3DP05423 398 aaPredicted RBP13.68□□□□□ -0.22
CLCF1-202ENST00000533438 HERVK_113P62684 666 aa13.68□□□□□ -0.22
CLCF1-202ENST00000533438 EVX2Q03828 476 aa13.68□□□□□ -0.22
CLCF1-202ENST00000533438 USP17L2Q6R6M4 530 aa13.68□□□□□ -0.22
CLCF1-202ENST00000533438 SDR42E1Q8WUS8 393 aa13.68□□□□□ -0.22
CLCF1-202ENST00000533438 BCL11AQ9H165 835 aa13.68□□□□□ -0.22
CLCF1-202ENST00000533438 UNC93B1Q9H1C4 597 aa13.68□□□□□ -0.22
CLCF1-202ENST00000533438 TXNRD2Q9NNW7 524 aa13.68□□□□□ -0.22
CLCF1-202ENST00000533438 DCP1AQ9NPI6 582 aaPredicted RBP13.68□□□□□ -0.22
CLCF1-202ENST00000533438 RBM27Q9P2N5 1060 aaKnown RBP13.68□□□□□ -0.22
CLCF1-202ENST00000533438 GJD2Q9UKL4 321 aa13.68□□□□□ -0.22
CLCF1-202ENST00000533438 CEP290O15078 2479 aa13.67□□□□□ -0.22
CLCF1-202ENST00000533438 A0A1W2PPC1 479 aa13.67□□□□□ -0.22
CLCF1-202ENST00000533438 SMARCA5O60264 1052 aaPredicted RBP13.67□□□□□ -0.22
CLCF1-202ENST00000533438 PEX10O60683 326 aa13.67□□□□□ -0.22
CLCF1-202ENST00000533438 GUCY1A2P33402 732 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms