RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 CRACR2BQ8N4Y2 399 aaPredicted RBP11.85□□□□□ -0.51
NUP98-220ENST00000533346 EVI5LQ96CN4 794 aa11.85□□□□□ -0.51
NUP98-220ENST00000533346 MCOLN1Q9GZU1 580 aa11.85□□□□□ -0.51
NUP98-220ENST00000533346 ARMT1Q9H993 441 aa11.85□□□□□ -0.51
NUP98-220ENST00000533346 SWAP70Q9UH65 585 aa11.85□□□□□ -0.51
NUP98-220ENST00000533346 FAM196BA6NMK8 535 aa11.84□□□□□ -0.51
NUP98-220ENST00000533346 MBD4O95243 580 aa11.84□□□□□ -0.51
NUP98-220ENST00000533346 SHMT1P34896 483 aa11.84□□□□□ -0.51
NUP98-220ENST00000533346 SP3Q02447 781 aa11.84□□□□□ -0.51
NUP98-220ENST00000533346 SLFNL1Q499Z3 407 aa11.84□□□□□ -0.51
NUP98-220ENST00000533346 C12orf60Q5U649 245 aa11.84□□□□□ -0.51
NUP98-220ENST00000533346 SDR42E1Q8WUS8 393 aa11.84□□□□□ -0.51
NUP98-220ENST00000533346 OSBP2Q969R2 916 aa11.84□□□□□ -0.51
NUP98-220ENST00000533346 ERO1AQ96HE7 468 aa11.84□□□□□ -0.51
NUP98-220ENST00000533346 MCM9Q9NXL9 1143 aa11.84□□□□□ -0.51
NUP98-220ENST00000533346 PCDH10Q9P2E7 1040 aa11.84□□□□□ -0.51
NUP98-220ENST00000533346 SAP30BPQ9UHR5 308 aaKnown RBP11.84□□□□□ -0.51
NUP98-220ENST00000533346 ZBTB21Q9ULJ3 1066 aa11.84□□□□□ -0.51
NUP98-220ENST00000533346 MGAMO43451 1857 aa11.83□□□□□ -0.52
NUP98-220ENST00000533346 GSG1L2A8MUP6 293 aa11.83□□□□□ -0.52
NUP98-220ENST00000533346 PDHXO00330 501 aa11.83□□□□□ -0.52
NUP98-220ENST00000533346 PRKAB2O43741 272 aa11.83□□□□□ -0.52
NUP98-220ENST00000533346 GNRH1P01148 92 aa11.83□□□□□ -0.52
NUP98-220ENST00000533346 CHGBP05060 677 aa11.83□□□□□ -0.52
NUP98-220ENST00000533346 POLR3DP05423 398 aaPredicted RBP11.83□□□□□ -0.52
NUP98-220ENST00000533346 HOXA7P31268 230 aaPredicted RBP11.83□□□□□ -0.52
NUP98-220ENST00000533346 BACE1P56817 501 aa11.83□□□□□ -0.52
NUP98-220ENST00000533346 JAG1P78504 1218 aa11.83□□□□□ -0.52
NUP98-220ENST00000533346 SPP2Q13103 211 aa11.83□□□□□ -0.52
NUP98-220ENST00000533346 ZMYM1Q5SVZ6 1142 aa11.83□□□□□ -0.52
NUP98-220ENST00000533346 TSHZ3Q63HK5 1081 aa11.83□□□□□ -0.52
NUP98-220ENST00000533346 PLEKHM2Q8IWE5 1019 aa11.83□□□□□ -0.52
NUP98-220ENST00000533346 C12orf42Q96LP6 360 aa11.83□□□□□ -0.52
NUP98-220ENST00000533346 TRIM34Q9BYJ4 488 aa11.83□□□□□ -0.52
NUP98-220ENST00000533346 ARPP21Q9UBL0 812 aaPredicted RBP11.83□□□□□ -0.52
NUP98-220ENST00000533346 AGTPBP1Q9UPW5 1226 aa11.83□□□□□ -0.52
NUP98-220ENST00000533346 GREB1LQ9C091 1923 aaPredicted RBP11.83□□□□□ -0.52
NUP98-220ENST00000533346 PATL2C9JE40 543 aaKnown RBP11.82□□□□□ -0.52
NUP98-220ENST00000533346 USP17L10C9JJH3 530 aa11.82□□□□□ -0.52
NUP98-220ENST00000533346 BCRP11274 1271 aa11.82□□□□□ -0.52
NUP98-220ENST00000533346 DGKZQ13574 1117 aa11.82□□□□□ -0.52
NUP98-220ENST00000533346 ARHGEF6Q15052 776 aa11.82□□□□□ -0.52
NUP98-220ENST00000533346 CERKLQ49MI3 558 aaPredicted RBP11.82□□□□□ -0.52
NUP98-220ENST00000533346 CTR9Q6PD62 1173 aa11.82□□□□□ -0.52
NUP98-220ENST00000533346 DDRGK1Q96HY6 314 aa11.82□□□□□ -0.52
NUP98-220ENST00000533346 CCDC17Q96LX7 622 aa11.82□□□□□ -0.52
NUP98-220ENST00000533346 PARK7Q99497 189 aaKnown RBP11.82□□□□□ -0.52
NUP98-220ENST00000533346 LNPKQ9C0E8 428 aa11.82□□□□□ -0.52
NUP98-220ENST00000533346 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
NUP98-220ENST00000533346 SLC4A4Q9Y6R1 1079 aa11.82□□□□□ -0.52
NUP98-220ENST00000533346 ROBO3Q96MS0 1386 aa11.81□□□□□ -0.52
NUP98-220ENST00000533346 USP17L12C9JPN9 530 aa11.81□□□□□ -0.52
NUP98-220ENST00000533346 USP17L21D6R901 530 aa11.81□□□□□ -0.52
NUP98-220ENST00000533346 GPAA1O43292 621 aa11.81□□□□□ -0.52
NUP98-220ENST00000533346 GUCY1A2P33402 732 aa11.81□□□□□ -0.52
NUP98-220ENST00000533346 PRMT2P55345 433 aa11.81□□□□□ -0.52
NUP98-220ENST00000533346 PABPC4Q13310 644 aaKnown RBP eCLIP11.81□□□□□ -0.521e-6■■■□□ 14.8
NUP98-220ENST00000533346 FBXO46Q6PJ61 603 aaPredicted RBP11.81□□□□□ -0.52
NUP98-220ENST00000533346 C16orf86Q6ZW13 317 aa11.81□□□□□ -0.52
NUP98-220ENST00000533346 AMOTL1Q8IY63 956 aa11.81□□□□□ -0.52
NUP98-220ENST00000533346 BCL11AQ9H165 835 aa11.81□□□□□ -0.52
NUP98-220ENST00000533346 CABP5Q9NP86 173 aa11.81□□□□□ -0.52
NUP98-220ENST00000533346 HELLSQ9NRZ9 838 aa11.81□□□□□ -0.52
NUP98-220ENST00000533346 PNMA3Q9UL41 463 aa11.81□□□□□ -0.52
NUP98-220ENST00000533346 PDE4DIPQ5VU43 2346 aa11.8□□□□□ -0.52
NUP98-220ENST00000533346 TRIM75PA6NK02 468 aa11.8□□□□□ -0.52
NUP98-220ENST00000533346 USP14P54578 494 aa11.8□□□□□ -0.52
NUP98-220ENST00000533346 ABCB5Q2M3G0 1257 aa11.8□□□□□ -0.52
NUP98-220ENST00000533346 OTOP1Q7RTM1 612 aa11.8□□□□□ -0.52
NUP98-220ENST00000533346 FSD1Q9BTV5 496 aa11.8□□□□□ -0.52
NUP98-220ENST00000533346 KIAA1683Q9H0B3 1180 aa11.8□□□□□ -0.52
NUP98-220ENST00000533346 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.8□□□□□ -0.52
NUP98-220ENST00000533346 M0R2C6 588 aa11.79□□□□□ -0.52
NUP98-220ENST00000533346 GDF11O95390 407 aa11.79□□□□□ -0.52
NUP98-220ENST00000533346 GH2P01242 217 aa11.79□□□□□ -0.52
NUP98-220ENST00000533346 GCLCP48506 637 aaPredicted RBP11.79□□□□□ -0.52
NUP98-220ENST00000533346 CDK8P49336 464 aa11.79□□□□□ -0.52
NUP98-220ENST00000533346 LACTBP83111 547 aaPredicted RBP11.79□□□□□ -0.52
NUP98-220ENST00000533346 ALX1Q15699 326 aa11.79□□□□□ -0.52
NUP98-220ENST00000533346 B4GALNT3Q6L9W6 998 aa11.79□□□□□ -0.52
NUP98-220ENST00000533346 USP17L2Q6R6M4 530 aa11.79□□□□□ -0.52
NUP98-220ENST00000533346 TMEM179Q6ZVK1 233 aa11.79□□□□□ -0.52
NUP98-220ENST00000533346 CCDC84Q86UT8 332 aaPredicted RBP11.79□□□□□ -0.52
NUP98-220ENST00000533346 IFNL3Q8IZI9 196 aa11.79□□□□□ -0.52
NUP98-220ENST00000533346 PTPN22Q9Y2R2 807 aa11.79□□□□□ -0.52
NUP98-220ENST00000533346 CYP2D6P10635 497 aa11.78□□□□□ -0.52
NUP98-220ENST00000533346 OSBPP22059 807 aa11.78□□□□□ -0.52
NUP98-220ENST00000533346 HMGCS2P54868 508 aa11.78□□□□□ -0.52
NUP98-220ENST00000533346 CAP1Q01518 475 aa11.78□□□□□ -0.52
NUP98-220ENST00000533346 MTMR2Q13614 643 aa11.78□□□□□ -0.52
NUP98-220ENST00000533346 SHROOM1Q2M3G4 852 aaPredicted RBP11.78□□□□□ -0.52
NUP98-220ENST00000533346 TREML2Q5T2D2 321 aa11.78□□□□□ -0.52
NUP98-220ENST00000533346 GADL1Q6ZQY3 521 aa11.78□□□□□ -0.52
NUP98-220ENST00000533346 CD99L2Q8TCZ2 262 aa11.78□□□□□ -0.52
NUP98-220ENST00000533346 GTF3C2Q8WUA4 911 aaPredicted RBP11.78□□□□□ -0.52
NUP98-220ENST00000533346 SEC62Q99442 399 aaKnown RBP11.78□□□□□ -0.52
NUP98-220ENST00000533346 EFCC1Q9HA90 598 aa11.78□□□□□ -0.52
NUP98-220ENST00000533346 EPB41L4AQ9HCS5 686 aaPredicted RBP11.78□□□□□ -0.52
NUP98-220ENST00000533346 EMILIN3Q9NT22 766 aa11.78□□□□□ -0.52
NUP98-220ENST00000533346 TMOD4Q9NZQ9 345 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms