RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ZBTB21Q9ULJ3 1066 aa24.56■■□□□ 1.52
CCS-208ENST00000533244 USP17L5A8MUK1 530 aa24.55■■□□□ 1.52
CCS-208ENST00000533244 GDF11O95390 407 aa24.55■■□□□ 1.52
CCS-208ENST00000533244 GNAT2P19087 354 aa24.55■■□□□ 1.52
CCS-208ENST00000533244 CRHR2Q13324 411 aa24.55■■□□□ 1.52
CCS-208ENST00000533244 SHROOM1Q2M3G4 852 aaPredicted RBP24.55■■□□□ 1.52
CCS-208ENST00000533244 C12orf60Q5U649 245 aa24.55■■□□□ 1.52
CCS-208ENST00000533244 ANKRD23Q86SG2 305 aa24.55■■□□□ 1.52
CCS-208ENST00000533244 USP17L12C9JPN9 530 aa24.54■■□□□ 1.52
CCS-208ENST00000533244 USP17L21D6R901 530 aa24.54■■□□□ 1.52
CCS-208ENST00000533244 GPR25O00155 361 aa24.54■■□□□ 1.52
CCS-208ENST00000533244 CTR9Q6PD62 1173 aa24.54■■□□□ 1.52
CCS-208ENST00000533244 DDRGK1Q96HY6 314 aa24.54■■□□□ 1.52
CCS-208ENST00000533244 WDR18Q9BV38 432 aa24.54■■□□□ 1.52
CCS-208ENST00000533244 SBK1Q52WX2 424 aa24.53■■□□□ 1.52
CCS-208ENST00000533244 ZNF280CQ8ND82 737 aa24.53■■□□□ 1.52
CCS-208ENST00000533244 EPB41L4AQ9HCS5 686 aaPredicted RBP24.53■■□□□ 1.52
CCS-208ENST00000533244 ARPP21Q9UBL0 812 aaPredicted RBP24.53■■□□□ 1.52
CCS-208ENST00000533244 LOC285556D6RIA3 1793 aa24.53■■□□□ 1.52
CCS-208ENST00000533244 TRIM75PA6NK02 468 aa24.52■■□□□ 1.52
CCS-208ENST00000533244 TAF1CQ15572 869 aaPredicted RBP24.52■■□□□ 1.52
CCS-208ENST00000533244 GPAT2Q6NUI2 795 aa24.52■■□□□ 1.52
CCS-208ENST00000533244 ZNF296Q8WUU4 475 aaPredicted RBP24.52■■□□□ 1.52
CCS-208ENST00000533244 SWAP70Q9UH65 585 aa24.52■■□□□ 1.52
CCS-208ENST00000533244 CYP2D7A0A087X1C5 515 aa24.52■■□□□ 1.52
CCS-208ENST00000533244 TRIM6-TRIM34B2RNG4 842 aa24.52■■□□□ 1.52
CCS-208ENST00000533244 SMIM22K7EJ46 135 aa24.52■■□□□ 1.52
CCS-208ENST00000533244 GH2P01242 217 aa24.52■■□□□ 1.52
CCS-208ENST00000533244 SPP2Q13103 211 aa24.52■■□□□ 1.52
CCS-208ENST00000533244 CERKLQ49MI3 558 aaPredicted RBP24.52■■□□□ 1.52
CCS-208ENST00000533244 FASTKD5Q7L8L6 764 aaKnown RBP24.52■■□□□ 1.52
CCS-208ENST00000533244 AMOTL1Q8IY63 956 aa24.52■■□□□ 1.52
CCS-208ENST00000533244 AS3MTQ9HBK9 375 aa24.52■■□□□ 1.52
CCS-208ENST00000533244 PATL2C9JE40 543 aaKnown RBP24.51■■□□□ 1.51
CCS-208ENST00000533244 SH3D19Q5HYK7 790 aa24.51■■□□□ 1.51
CCS-208ENST00000533244 C16orf86Q6ZW13 317 aa24.51■■□□□ 1.51
CCS-208ENST00000533244 SLC44A5Q8NCS7 719 aa24.51■■□□□ 1.51
CCS-208ENST00000533244 DYNLL2Q96FJ2 89 aa24.51■■□□□ 1.51
CCS-208ENST00000533244 HELLSQ9NRZ9 838 aa24.51■■□□□ 1.51
CCS-208ENST00000533244 ROBO3Q96MS0 1386 aa24.5■■□□□ 1.51
CCS-208ENST00000533244 FOXP2O15409 715 aa24.5■■□□□ 1.51
CCS-208ENST00000533244 ABCB5Q2M3G0 1257 aa24.5■■□□□ 1.51
CCS-208ENST00000533244 RILPL2Q969X0 211 aa24.5■■□□□ 1.51
CCS-208ENST00000533244 ZFYVE28Q9HCC9 887 aa24.5■■□□□ 1.51
CCS-208ENST00000533244 MYH8P13535 1937 aa24.49■■□□□ 1.51
CCS-208ENST00000533244 PDHXO00330 501 aa24.49■■□□□ 1.51
CCS-208ENST00000533244 IFNL3Q8IZI9 196 aa24.49■■□□□ 1.51
CCS-208ENST00000533244 PROCA1Q8NCQ7 364 aaPredicted RBP24.49■■□□□ 1.51
CCS-208ENST00000533244 FAM227BQ96M60 508 aa24.49■■□□□ 1.51
CCS-208ENST00000533244 SLC45A1Q9Y2W3 748 aa24.49■■□□□ 1.51
CCS-208ENST00000533244 A0A0D9SFI3 127 aa24.48■■□□□ 1.51
CCS-208ENST00000533244 FKTNO75072 461 aa24.48■■□□□ 1.51
CCS-208ENST00000533244 GUCY1A2P33402 732 aa24.48■■□□□ 1.51
CCS-208ENST00000533244 CCDC129Q6ZRS4 1044 aa24.48■■□□□ 1.51
CCS-208ENST00000533244 TNS4Q8IZW8 715 aa24.48■■□□□ 1.51
CCS-208ENST00000533244 ADGRA2Q96PE1 1338 aa24.48■■□□□ 1.51
CCS-208ENST00000533244 TLR2O60603 784 aa24.47■■□□□ 1.51
CCS-208ENST00000533244 GSPT1P15170 499 aaKnown RBP24.47■■□□□ 1.51
CCS-208ENST00000533244 SDSP20132 328 aa24.47■■□□□ 1.51
CCS-208ENST00000533244 CDK8P49336 464 aa24.47■■□□□ 1.51
CCS-208ENST00000533244 BACE1P56817 501 aa24.47■■□□□ 1.51
CCS-208ENST00000533244 TTC22Q5TAA0 569 aa24.47■■□□□ 1.51
CCS-208ENST00000533244 GADL1Q6ZQY3 521 aa24.47■■□□□ 1.51
CCS-208ENST00000533244 AGTPBP1Q9UPW5 1226 aa24.47■■□□□ 1.51
CCS-208ENST00000533244 TDO2P48775 406 aa24.46■■□□□ 1.51
CCS-208ENST00000533244 HMGCS2P54868 508 aa24.46■■□□□ 1.51
CCS-208ENST00000533244 NMIQ13287 307 aaPredicted RBP24.46■■□□□ 1.51
CCS-208ENST00000533244 MCMDC2Q4G0Z9 681 aa24.46■■□□□ 1.51
CCS-208ENST00000533244 CENPQQ7L2Z9 268 aaPredicted RBP24.46■■□□□ 1.51
CCS-208ENST00000533244 NACAP1Q9BZK3 213 aa24.46■■□□□ 1.51
CCS-208ENST00000533244 CABP5Q9NP86 173 aa24.46■■□□□ 1.51
CCS-208ENST00000533244 APPP05067 770 aa24.45■■□□□ 1.51
CCS-208ENST00000533244 MTMR2Q13614 643 aa24.45■■□□□ 1.51
CCS-208ENST00000533244 C19orf81C9J6K1 198 aa24.44■■□□□ 1.5
CCS-208ENST00000533244 USP17L10C9JJH3 530 aa24.44■■□□□ 1.5
CCS-208ENST00000533244 DGKZQ13574 1117 aa24.44■■□□□ 1.5
CCS-208ENST00000533244 TREML2Q5T2D2 321 aa24.44■■□□□ 1.5
CCS-208ENST00000533244 CCDC17Q96LX7 622 aa24.44■■□□□ 1.5
CCS-208ENST00000533244 PARK7Q99497 189 aaKnown RBP24.44■■□□□ 1.5
CCS-208ENST00000533244 AKR1B1P15121 316 aa24.44■■□□□ 1.5
CCS-208ENST00000533244 SEPT2Q15019 361 aa24.44■■□□□ 1.5
CCS-208ENST00000533244 RAB3GAP1Q15042 981 aa24.44■■□□□ 1.5
CCS-208ENST00000533244 VPS53Q5VIR6 699 aa24.44■■□□□ 1.5
CCS-208ENST00000533244 C17orf99Q6UX52 265 aa24.44■■□□□ 1.5
CCS-208ENST00000533244 TMEM179Q6ZVK1 233 aa24.44■■□□□ 1.5
CCS-208ENST00000533244 CTU1Q7Z7A3 348 aaKnown RBP24.44■■□□□ 1.5
CCS-208ENST00000533244 ZNF589Q86UQ0 364 aaPredicted RBP24.44■■□□□ 1.5
CCS-208ENST00000533244 GREB1LQ9C091 1923 aaPredicted RBP24.43■■□□□ 1.5
CCS-208ENST00000533244 MINDY4BA8MYZ0 360 aa24.43■■□□□ 1.5
CCS-208ENST00000533244 SP3Q02447 781 aa24.43■■□□□ 1.5
CCS-208ENST00000533244 NAPBQ9H115 298 aa24.43■■□□□ 1.5
CCS-208ENST00000533244 HIP1O00291 1037 aa24.42■■□□□ 1.5
CCS-208ENST00000533244 CYP2C8P10632 490 aa24.42■■□□□ 1.5
CCS-208ENST00000533244 ALX1Q15699 326 aa24.42■■□□□ 1.5
CCS-208ENST00000533244 C12orf42Q96LP6 360 aa24.42■■□□□ 1.5
CCS-208ENST00000533244 KIAA1683Q9H0B3 1180 aa24.42■■□□□ 1.5
CCS-208ENST00000533244 CCDC171Q6TFL3 1326 aa24.42■■□□□ 1.5
CCS-208ENST00000533244 ACER1Q8TDN7 264 aa24.41■■□□□ 1.5
CCS-208ENST00000533244 ERO1AQ96HE7 468 aa24.41■■□□□ 1.5
CCS-208ENST00000533244 MCOLN1Q9GZU1 580 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms