RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 CCZ1BP86790 482 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 CCZ1P86791 482 aaPredicted RBP17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 TROAPQ12815 778 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 IFIT1BQ5T764 474 aaKnown RBP17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 ARHGEF1Q92888 912 aaKnown RBP17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 RNF26Q9BY78 433 aaPredicted RBP17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 CABP5Q9NP86 173 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 VPS54Q9P1Q0 977 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 ZNF831Q5JPB2 1677 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 USP27XA6NNY8 438 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 RIOK3O14730 519 aaKnown RBP17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 SEMA3EO15041 775 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 NMT2O60551 498 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 TOM1O60784 492 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 SKILP12757 684 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 ATP1A3P13637 1013 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 ATP2B1P20020 1258 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 BMP6P22004 513 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 LMOD1P29536 600 aaPredicted RBP17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 MDM2Q00987 491 aaPredicted RBP17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 CHAF1AQ13111 956 aaPredicted RBP17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 EARS2Q5JPH6 523 aaKnown RBP17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 TPTE2Q6XPS3 522 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 CNNM3Q8NE01 707 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 DCP1AQ9NPI6 582 aaPredicted RBP17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 PCDHA5Q9Y5H7 936 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 A0A1B0GUL6 1792 aa17.64■□□□□ 0.42
CACNA1E-208ENST00000533229 V9GY48 417 aaPredicted RBP17.64■□□□□ 0.41
CACNA1E-208ENST00000533229 DUOX1Q9NRD9 1551 aa17.64■□□□□ 0.41
CACNA1E-208ENST00000533229 SMC2O95347 1197 aa17.63■□□□□ 0.41
CACNA1E-208ENST00000533229 CYP2D6P10635 497 aa17.63■□□□□ 0.41
CACNA1E-208ENST00000533229 CCNL1Q9UK58 526 aaPredicted RBP17.63■□□□□ 0.41
CACNA1E-208ENST00000533229 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.63■□□□□ 0.41
CACNA1E-208ENST00000533229 SCN7AQ01118 1682 aa17.63■□□□□ 0.41
CACNA1E-208ENST00000533229 SMTNL1A8MU46 457 aa17.63■□□□□ 0.41
CACNA1E-208ENST00000533229 IKBKBO14920 756 aa17.63■□□□□ 0.41
CACNA1E-208ENST00000533229 NEMFO60524 1076 aa17.63■□□□□ 0.41
CACNA1E-208ENST00000533229 PPP2R5BQ15173 497 aa17.63■□□□□ 0.41
CACNA1E-208ENST00000533229 USP49Q70CQ1 688 aa17.63■□□□□ 0.41
CACNA1E-208ENST00000533229 IQCA1Q86XH1 822 aa17.63■□□□□ 0.41
CACNA1E-208ENST00000533229 ANKRD2Q9GZV1 360 aa17.63■□□□□ 0.41
CACNA1E-208ENST00000533229 OSBPL5Q9H0X9 879 aaPredicted RBP17.63■□□□□ 0.41
CACNA1E-208ENST00000533229 RTCBQ9Y3I0 505 aaKnown RBP17.63■□□□□ 0.41
CACNA1E-208ENST00000533229 IRS2Q9Y4H2 1338 aa17.63■□□□□ 0.41
CACNA1E-208ENST00000533229 TNNT1P13805 278 aa17.62■□□□□ 0.41
CACNA1E-208ENST00000533229 FAM47AQ5JRC9 791 aa17.62■□□□□ 0.41
CACNA1E-208ENST00000533229 CATIPQ7Z7H3 387 aa17.62■□□□□ 0.41
CACNA1E-208ENST00000533229 ZNF710Q8N1W2 664 aa17.62■□□□□ 0.41
CACNA1E-208ENST00000533229 PHF20Q9BVI0 1012 aa17.62■□□□□ 0.41
CACNA1E-208ENST00000533229 WNT7AO00755 349 aa17.62■□□□□ 0.41
CACNA1E-208ENST00000533229 POLR2DO15514 142 aaKnown RBP17.62■□□□□ 0.41
CACNA1E-208ENST00000533229 PRPF3O43395 683 aaKnown RBP17.62■□□□□ 0.41
CACNA1E-208ENST00000533229 PDE4BQ07343 736 aa17.62■□□□□ 0.41
CACNA1E-208ENST00000533229 TPD52L1Q16890 204 aaPredicted RBP17.62■□□□□ 0.41
CACNA1E-208ENST00000533229 SRPRBQ9Y5M8 271 aaKnown RBP17.62■□□□□ 0.41
CACNA1E-208ENST00000533229 PDS5AQ29RF7 1337 aaKnown RBP17.62■□□□□ 0.41
CACNA1E-208ENST00000533229 FANCCQ00597 558 aa17.61■□□□□ 0.41
CACNA1E-208ENST00000533229 AKAP17AQ02040 695 aaKnown RBP17.61■□□□□ 0.41
CACNA1E-208ENST00000533229 SLC4A8Q2Y0W8 1093 aa17.61■□□□□ 0.41
CACNA1E-208ENST00000533229 NOM1Q5C9Z4 860 aaKnown RBP17.61■□□□□ 0.41
CACNA1E-208ENST00000533229 FNBP4Q8N3X1 1017 aaPredicted RBP17.61■□□□□ 0.41
CACNA1E-208ENST00000533229 PRR29P0C7W0 189 aa17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 PCP11498 1178 aaKnown RBP17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 NPY5RQ15761 445 aa17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 ARMCX5Q6P1M9 558 aa17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 TMC6Q7Z403 805 aa17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 GRAMD1CQ8IYS0 662 aa17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 DPF2Q92785 391 aa17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 CRNKL1Q9BZJ0 848 aaKnown RBP17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 CSRNP2Q9H175 543 aa17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 IMPACTQ9P2X3 320 aa17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 SERTAD1Q9UHV2 236 aa17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 ORC4O43929 436 aa17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 MYL5Q02045 173 aa17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 TMTC3Q6ZXV5 915 aa17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 ELOA2Q8IYF1 753 aaPredicted RBP17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 SRBD1Q8N5C6 995 aaKnown RBP17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 PDILTQ8N807 584 aa17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 ZNF579Q8NAF0 562 aaKnown RBP17.6■□□□□ 0.41
CACNA1E-208ENST00000533229 BAZ2AQ9UIF9 1905 aaKnown RBP17.59■□□□□ 0.41
CACNA1E-208ENST00000533229 CASZ1Q86V15 1759 aa17.59■□□□□ 0.41
CACNA1E-208ENST00000533229 VEGFAP15692 232 aaPredicted RBP17.59■□□□□ 0.41
CACNA1E-208ENST00000533229 GSDMDP57764 484 aa17.59■□□□□ 0.41
CACNA1E-208ENST00000533229 ZMYND15Q9H091 742 aa17.59■□□□□ 0.41
CACNA1E-208ENST00000533229 ATP8A2Q9NTI2 1148 aa17.59■□□□□ 0.41
CACNA1E-208ENST00000533229 RBM28Q9NW13 759 aaKnown RBP17.59■□□□□ 0.41
CACNA1E-208ENST00000533229 TPM4P67936 248 aa17.59■□□□□ 0.41
CACNA1E-208ENST00000533229 POSTNQ15063 836 aa17.59■□□□□ 0.41
CACNA1E-208ENST00000533229 TRMT1Q9NXH9 659 aaKnown RBP17.59■□□□□ 0.41
CACNA1E-208ENST00000533229 MAN1B1Q9UKM7 699 aa17.59■□□□□ 0.41
CACNA1E-208ENST00000533229 DDAH1O94760 285 aa17.58■□□□□ 0.4
CACNA1E-208ENST00000533229 USP17L8P0C7I0 530 aa17.58■□□□□ 0.4
CACNA1E-208ENST00000533229 XBP1P17861 261 aa17.58■□□□□ 0.4
CACNA1E-208ENST00000533229 KRT2P35908 639 aa17.58■□□□□ 0.4
CACNA1E-208ENST00000533229 SARSP49591 514 aaKnown RBP17.58■□□□□ 0.4
CACNA1E-208ENST00000533229 NFIXQ14938 502 aa17.58■□□□□ 0.4
CACNA1E-208ENST00000533229 FANCLQ9NW38 375 aa17.58■□□□□ 0.4
CACNA1E-208ENST00000533229 CNTNAP5Q8WYK1 1306 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 A0A087X0B3 334 aa17.57■□□□□ 0.4
CACNA1E-208ENST00000533229 ACTN4O43707 911 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms