RNA–Protein interactions for RNA: ENST00000533062.5

CHORDC1-208, Transcript of cysteine and histidine rich domain containing 1, human

TSL 4

Gene CHORDC1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHORDC1-208	ENST00000533062	MYH1	P12882	1939 aa		13.82	□□□□□ -0.2
CHORDC1-208	ENST00000533062		M0R2C6	588 aa		13.82	□□□□□ -0.2
CHORDC1-208	ENST00000533062	TLR2	O60603	784 aa		13.82	□□□□□ -0.2
CHORDC1-208	ENST00000533062	SHMT1	P34896	483 aa		13.82	□□□□□ -0.2
CHORDC1-208	ENST00000533062	HMGCS2	P54868	508 aa		13.82	□□□□□ -0.2
CHORDC1-208	ENST00000533062	TREML2	Q5T2D2	321 aa		13.82	□□□□□ -0.2
CHORDC1-208	ENST00000533062	TATDN1	Q6P1N9	297 aa		13.82	□□□□□ -0.2
CHORDC1-208	ENST00000533062	FASTKD5	Q7L8L6	764 aa	Known RBP	13.82	□□□□□ -0.2
CHORDC1-208	ENST00000533062	SLC44A5	Q8NCS7	719 aa		13.82	□□□□□ -0.2
CHORDC1-208	ENST00000533062	SEC62	Q99442	399 aa	Known RBP	13.82	□□□□□ -0.2
CHORDC1-208	ENST00000533062	FSD1	Q9BTV5	496 aa		13.82	□□□□□ -0.2
CHORDC1-208	ENST00000533062	EHD4	Q9H223	541 aa		13.82	□□□□□ -0.2
CHORDC1-208	ENST00000533062	STAP2	Q9UGK3	403 aa		13.82	□□□□□ -0.2
CHORDC1-208	ENST00000533062	ZBTB21	Q9ULJ3	1066 aa		13.82	□□□□□ -0.2
CHORDC1-208	ENST00000533062	TRIM17	Q9Y577	477 aa		13.82	□□□□□ -0.2
CHORDC1-208	ENST00000533062	PHIP	Q8WWQ0	1821 aa		13.81	□□□□□ -0.2
CHORDC1-208	ENST00000533062	USP17L12	C9JPN9	530 aa		13.81	□□□□□ -0.2
CHORDC1-208	ENST00000533062	USP17L21	D6R901	530 aa		13.81	□□□□□ -0.2
CHORDC1-208	ENST00000533062	ASNS	P08243	561 aa		13.81	□□□□□ -0.2
CHORDC1-208	ENST00000533062	NUCB1	Q02818	461 aa		13.81	□□□□□ -0.2
CHORDC1-208	ENST00000533062	MTMR2	Q13614	643 aa		13.81	□□□□□ -0.2
CHORDC1-208	ENST00000533062	RAB3GAP1	Q15042	981 aa		13.81	□□□□□ -0.2
CHORDC1-208	ENST00000533062	CERKL	Q49MI3	558 aa	Predicted RBP	13.81	□□□□□ -0.2
CHORDC1-208	ENST00000533062	CHD1L	Q86WJ1	897 aa		13.81	□□□□□ -0.2
CHORDC1-208	ENST00000533062	APPBP2	Q92624	585 aa		13.81	□□□□□ -0.2
CHORDC1-208	ENST00000533062	STRBP	Q96SI9	672 aa	Known RBP	13.81	□□□□□ -0.2
CHORDC1-208	ENST00000533062	ARHGAP39	Q9C0H5	1083 aa		13.81	□□□□□ -0.2
CHORDC1-208	ENST00000533062	ZCCHC17	Q9NP64	241 aa	Known RBP	13.81	□□□□□ -0.2
CHORDC1-208	ENST00000533062	ATP8A2	Q9NTI2	1148 aa		13.81	□□□□□ -0.2
CHORDC1-208	ENST00000533062	NAV1	Q8NEY1	1877 aa		13.8	□□□□□ -0.2
CHORDC1-208	ENST00000533062	GPAA1	O43292	621 aa		13.8	□□□□□ -0.2
CHORDC1-208	ENST00000533062	GABPA	Q06546	454 aa		13.8	□□□□□ -0.2
CHORDC1-208	ENST00000533062	ABCB5	Q2M3G0	1257 aa		13.8	□□□□□ -0.2
CHORDC1-208	ENST00000533062	OTOP1	Q7RTM1	612 aa		13.8	□□□□□ -0.2
CHORDC1-208	ENST00000533062	ERO1A	Q96HE7	468 aa		13.8	□□□□□ -0.2
CHORDC1-208	ENST00000533062	AS3MT	Q9HBK9	375 aa		13.8	□□□□□ -0.2
CHORDC1-208	ENST00000533062	DDX60L	Q5H9U9	1706 aa	Known RBP	13.8	□□□□□ -0.2
CHORDC1-208	ENST00000533062	ATAD5	Q96QE3	1844 aa		13.8	□□□□□ -0.2
CHORDC1-208	ENST00000533062	GSG1L2	A8MUP6	293 aa		13.79	□□□□□ -0.2
CHORDC1-208	ENST00000533062	MPHOSPH10	O00566	681 aa	Known RBP	13.79	□□□□□ -0.2
CHORDC1-208	ENST00000533062	ZFY	P08048	801 aa	Predicted RBP	13.79	□□□□□ -0.2
CHORDC1-208	ENST00000533062	BACE1	P56817	501 aa		13.79	□□□□□ -0.2
CHORDC1-208	ENST00000533062	ZYX	Q15942	572 aa	Known RBP	13.79	□□□□□ -0.2
CHORDC1-208	ENST00000533062	C12orf60	Q5U649	245 aa		13.79	□□□□□ -0.2
CHORDC1-208	ENST00000533062	CTR9	Q6PD62	1173 aa		13.79	□□□□□ -0.2
CHORDC1-208	ENST00000533062	C17orf99	Q6UX52	265 aa		13.79	□□□□□ -0.2
CHORDC1-208	ENST00000533062	STK11IP	Q8N1F8	1099 aa		13.79	□□□□□ -0.2
CHORDC1-208	ENST00000533062	WDR18	Q9BV38	432 aa		13.79	□□□□□ -0.2
CHORDC1-208	ENST00000533062	EFCC1	Q9HA90	598 aa		13.79	□□□□□ -0.2
CHORDC1-208	ENST00000533062	AGTPBP1	Q9UPW5	1226 aa		13.79	□□□□□ -0.2
CHORDC1-208	ENST00000533062	HPS5	Q9UPZ3	1129 aa		13.79	□□□□□ -0.2
CHORDC1-208	ENST00000533062	MYH7	P12883	1935 aa		13.79	□□□□□ -0.2
CHORDC1-208	ENST00000533062	APP	P05067	770 aa		13.78	□□□□□ -0.2
CHORDC1-208	ENST00000533062	CCDC129	Q6ZRS4	1044 aa		13.78	□□□□□ -0.2
CHORDC1-208	ENST00000533062	PLEKHM2	Q8IWE5	1019 aa		13.78	□□□□□ -0.2
CHORDC1-208	ENST00000533062	ACER1	Q8TDN7	264 aa		13.78	□□□□□ -0.2
CHORDC1-208	ENST00000533062	DDRGK1	Q96HY6	314 aa		13.78	□□□□□ -0.2
CHORDC1-208	ENST00000533062	PARK7	Q99497	189 aa	Known RBP	13.78	□□□□□ -0.2
CHORDC1-208	ENST00000533062	TBC1D2	Q9BYX2	928 aa		13.78	□□□□□ -0.2
CHORDC1-208	ENST00000533062	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.78	□□□□□ -0.2
CHORDC1-208	ENST00000533062	ADGRA2	Q96PE1	1338 aa		13.78	□□□□□ -0.2
CHORDC1-208	ENST00000533062	MINDY4B	A8MYZ0	360 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	TRIM6-TRIM34	B2RNG4	842 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	USP17L10	C9JJH3	530 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	CTGF	P29279	349 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	GUCY1A2	P33402	732 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	CDK8	P49336	464 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	BRCA2	P51587	3418 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	LACTB	P83111	547 aa	Predicted RBP	13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	SEPT2	Q15019	361 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	PKN2	Q16513	984 aa	Known RBP	13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	SH3D19	Q5HYK7	790 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	ZMYM1	Q5SVZ6	1142 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	CLEC10A	Q8IUN9	316 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	AMOTL1	Q8IY63	956 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	RILPL2	Q969X0	211 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	EVI5L	Q96CN4	794 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	CABP5	Q9NP86	173 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	EMILIN3	Q9NT22	766 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	GINM1	Q9NU53	330 aa		13.77	□□□□□ -0.21
CHORDC1-208	ENST00000533062	PTPRF	P10586	1907 aa		13.76	□□□□□ -0.21
CHORDC1-208	ENST00000533062	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.76	□□□□□ -0.21
CHORDC1-208	ENST00000533062	BCR	P11274	1271 aa		13.76	□□□□□ -0.21
CHORDC1-208	ENST00000533062	AKR1B1	P15121	316 aa		13.76	□□□□□ -0.21
CHORDC1-208	ENST00000533062	TDO2	P48775	406 aa		13.76	□□□□□ -0.21
CHORDC1-208	ENST00000533062	TMOD4	Q9NZQ9	345 aa		13.76	□□□□□ -0.21
CHORDC1-208	ENST00000533062	SWAP70	Q9UH65	585 aa		13.76	□□□□□ -0.21
CHORDC1-208	ENST00000533062	PTPN22	Q9Y2R2	807 aa		13.76	□□□□□ -0.21
CHORDC1-208	ENST00000533062	SLC45A1	Q9Y2W3	748 aa		13.76	□□□□□ -0.21
CHORDC1-208	ENST00000533062	ZSWIM8	A7E2V4	1837 aa		13.76	□□□□□ -0.21
CHORDC1-208	ENST00000533062	C19orf81	C9J6K1	198 aa		13.75	□□□□□ -0.21
CHORDC1-208	ENST00000533062	PATL2	C9JE40	543 aa	Known RBP	13.75	□□□□□ -0.21
CHORDC1-208	ENST00000533062	PEX10	O60683	326 aa		13.75	□□□□□ -0.21
CHORDC1-208	ENST00000533062	PDE4A	P27815	886 aa		13.75	□□□□□ -0.21
CHORDC1-208	ENST00000533062	PSMC4	P43686	418 aa		13.75	□□□□□ -0.21
CHORDC1-208	ENST00000533062	KIF22	Q14807	665 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 136 ms