RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 USP17L3A6NCW0 530 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 USP17L4A6NCW7 530 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 ESPNB1AK53 854 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 GSTO1P78417 241 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 TFAP4Q01664 338 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 NR5A1Q13285 461 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 ANO6Q4KMQ2 910 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 RCSD1Q6JBY9 416 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 USP17L1Q7RTZ2 530 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 OXER1Q8TDS5 423 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 NDUFA8P51970 172 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 PPP4CP60510 307 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 DPP8Q6V1X1 898 aaPredicted RBP17.6■□□□□ 0.41
SRPRA-206ENST00000532259 LUZP1Q86V48 1076 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 PDLIM2Q96JY6 352 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 MTA3Q9BTC8 594 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.6■□□□□ 0.41
SRPRA-206ENST00000532259 VPS54Q9P1Q0 977 aa17.6■□□□□ 0.41
SRPRA-206ENST00000532259 SLC3A2P08195 630 aaKnown RBP17.59■□□□□ 0.41
SRPRA-206ENST00000532259 VEGFAP15692 232 aaPredicted RBP17.59■□□□□ 0.41
SRPRA-206ENST00000532259 RHBDL3P58872 404 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 PDE4BQ07343 736 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 FUT2Q10981 343 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 ATL3Q6DD88 541 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 DIS3L2Q8IYB7 885 aaKnown RBP17.59■□□□□ 0.41
SRPRA-206ENST00000532259 ZC3H12CQ9C0D7 883 aaKnown RBP17.59■□□□□ 0.41
SRPRA-206ENST00000532259 POLR3EQ9NVU0 708 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 V9GY48 417 aaPredicted RBP17.59■□□□□ 0.41
SRPRA-206ENST00000532259 LAMB1P07942 1786 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 LRRC37AA6NMS7 1700 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 STK36Q9NRP7 1315 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 NRXN2Q9P2S2 1712 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 GPR75-ASB3A0A0A6YYF3 556 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 CCDC196A0A1B0GTZ2 297 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 ZBTB22O15209 634 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 WDHD1O75717 1129 aaPredicted RBP17.59■□□□□ 0.41
SRPRA-206ENST00000532259 PDE6BP35913 854 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 RASGRP2Q7LDG7 609 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 TEX11Q8IYF3 940 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 ENGASEQ8NFI3 743 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 DNAJC25Q9H1X3 360 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 MKNK2Q9HBH9 465 aa17.59■□□□□ 0.41
SRPRA-206ENST00000532259 TNS1Q9HBL0 1735 aaKnown RBP17.58■□□□□ 0.41
SRPRA-206ENST00000532259 KINO60870 393 aaKnown RBP17.58■□□□□ 0.41
SRPRA-206ENST00000532259 U2AF2P26368 475 aaKnown RBP eCLIP17.58■□□□□ 0.414e-17■■□□□ 12.9
SRPRA-206ENST00000532259 SCNN1DP51172 638 aa17.58■□□□□ 0.41
SRPRA-206ENST00000532259 PKN1Q16512 942 aa17.58■□□□□ 0.41
SRPRA-206ENST00000532259 SASS6Q6UVJ0 657 aa17.58■□□□□ 0.41
SRPRA-206ENST00000532259 MRPS27Q92552 414 aaKnown RBP17.58■□□□□ 0.41
SRPRA-206ENST00000532259 MASTLQ96GX5 879 aa17.58■□□□□ 0.41
SRPRA-206ENST00000532259 DBNDD1Q9H9R9 158 aa17.58■□□□□ 0.41
SRPRA-206ENST00000532259 AP5Z1O43299 807 aa17.58■□□□□ 0.4
SRPRA-206ENST00000532259 MMP1P03956 469 aa17.58■□□□□ 0.4
SRPRA-206ENST00000532259 LDHCP07864 332 aa17.58■□□□□ 0.4
SRPRA-206ENST00000532259 AKAP17AQ02040 695 aaKnown RBP17.58■□□□□ 0.4
SRPRA-206ENST00000532259 C2CD5Q86YS7 1000 aa17.58■□□□□ 0.4
SRPRA-206ENST00000532259 KCNG4Q8TDN1 519 aa17.58■□□□□ 0.4
SRPRA-206ENST00000532259 CLIC6Q96NY7 704 aa17.58■□□□□ 0.4
SRPRA-206ENST00000532259 DAGLAQ9Y4D2 1042 aa17.58■□□□□ 0.4
SRPRA-206ENST00000532259 FAM205CA6NFA0 338 aa17.57■□□□□ 0.4
SRPRA-206ENST00000532259 DEXIO95424 95 aa17.57■□□□□ 0.4
SRPRA-206ENST00000532259 ADCY5O95622 1261 aa17.57■□□□□ 0.4
SRPRA-206ENST00000532259 PTMAP06454 111 aaKnown RBP17.57■□□□□ 0.4
SRPRA-206ENST00000532259 PCP11498 1178 aaKnown RBP17.57■□□□□ 0.4
SRPRA-206ENST00000532259 FAM160A1Q05DH4 1040 aa17.57■□□□□ 0.4
SRPRA-206ENST00000532259 ADALQ6DHV7 355 aa17.57■□□□□ 0.4
SRPRA-206ENST00000532259 SRBD1Q8N5C6 995 aaKnown RBP17.57■□□□□ 0.4
SRPRA-206ENST00000532259 FLAD1Q8NFF5 587 aa17.57■□□□□ 0.4
SRPRA-206ENST00000532259 FLT1P17948 1338 aa17.57■□□□□ 0.4
SRPRA-206ENST00000532259 ALDH1B1P30837 517 aa17.57■□□□□ 0.4
SRPRA-206ENST00000532259 WASF1Q92558 559 aa17.57■□□□□ 0.4
SRPRA-206ENST00000532259 YEATS4O95619 227 aa17.56■□□□□ 0.4
SRPRA-206ENST00000532259 SLURP2P0DP57 97 aa17.56■□□□□ 0.4
SRPRA-206ENST00000532259 TOB1P50616 345 aaPredicted RBP17.56■□□□□ 0.4
SRPRA-206ENST00000532259 PICALMQ13492 652 aa17.56■□□□□ 0.4
SRPRA-206ENST00000532259 SAFBQ15424 915 aaKnown RBP eCLIP17.56■□□□□ 0.4
SRPRA-206ENST00000532259 SLC15A2Q16348 729 aa17.56■□□□□ 0.4
SRPRA-206ENST00000532259 SPECC1Q5M775 1068 aa17.56■□□□□ 0.4
SRPRA-206ENST00000532259 AXDND1Q5T1B0 1012 aaPredicted RBP17.56■□□□□ 0.4
SRPRA-206ENST00000532259 CAMKK2Q96RR4 588 aa17.56■□□□□ 0.4
SRPRA-206ENST00000532259 MAP3K14Q99558 947 aa17.56■□□□□ 0.4
SRPRA-206ENST00000532259 SDF4Q9BRK5 362 aa17.56■□□□□ 0.4
SRPRA-206ENST00000532259 COA1Q9GZY4 146 aa17.56■□□□□ 0.4
SRPRA-206ENST00000532259 PCDHAC2Q9Y5I4 1007 aa17.56■□□□□ 0.4
SRPRA-206ENST00000532259 CDK5RAP2Q96SN8 1893 aa17.56■□□□□ 0.4
SRPRA-206ENST00000532259 FAM205AQ6ZU69 1335 aa17.56■□□□□ 0.4
SRPRA-206ENST00000532259 NOM1Q5C9Z4 860 aaKnown RBP17.56■□□□□ 0.4
SRPRA-206ENST00000532259 RBM43Q6ZSC3 357 aaKnown RBP17.56■□□□□ 0.4
SRPRA-206ENST00000532259 NOSTRINQ8IVI9 506 aa17.56■□□□□ 0.4
SRPRA-206ENST00000532259 G3V3G9 751 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 ADAMTS3O15072 1205 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 PTPAQ15257 358 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 EARS2Q5JPH6 523 aaKnown RBP17.55■□□□□ 0.4
SRPRA-206ENST00000532259 DCAF8Q5TAQ9 597 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 TMC4Q7Z404 712 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 FMR1NBQ8N0W7 255 aaPredicted RBP17.55■□□□□ 0.4
SRPRA-206ENST00000532259 CBX8Q9HC52 389 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 MYH6P13533 1939 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 TSPY3P0CV98 308 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 TSPY8P0CW00 308 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms