RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 IGSF3O75054 1194 aa18.62■□□□□ 0.57
DEPDC7-204ENST00000532078 PRKCZQ05513 592 aa18.62■□□□□ 0.57
DEPDC7-204ENST00000532078 CCDC84Q86UT8 332 aaPredicted RBP18.62■□□□□ 0.57
DEPDC7-204ENST00000532078 PROCA1Q8NCQ7 364 aaPredicted RBP18.62■□□□□ 0.57
DEPDC7-204ENST00000532078 SH3RF3Q8TEJ3 882 aaPredicted RBP18.62■□□□□ 0.57
DEPDC7-204ENST00000532078 ZNF512BQ96KM6 892 aaPredicted RBP18.62■□□□□ 0.57
DEPDC7-204ENST00000532078 PNMA3Q9UL41 463 aa18.62■□□□□ 0.57
DEPDC7-204ENST00000532078 SLAIN1Q8ND83 568 aa18.61■□□□□ 0.57
DEPDC7-204ENST00000532078 NKX2-3Q8TAU0 364 aa18.61■□□□□ 0.57
DEPDC7-204ENST00000532078 DHX36Q9H2U1 1008 aaKnown RBP18.61■□□□□ 0.57
DEPDC7-204ENST00000532078 AATFQ9NY61 560 aaKnown RBP eCLIP18.61■□□□□ 0.57
DEPDC7-204ENST00000532078 NOP58Q9Y2X3 529 aaKnown RBP18.61■□□□□ 0.57
DEPDC7-204ENST00000532078 FOCADQ5VW36 1801 aa18.6■□□□□ 0.57
DEPDC7-204ENST00000532078 CAP2P40123 477 aa18.6■□□□□ 0.57
DEPDC7-204ENST00000532078 UBXN2AP68543 259 aa18.6■□□□□ 0.57
DEPDC7-204ENST00000532078 MTFR1Q15390 333 aa18.6■□□□□ 0.57
DEPDC7-204ENST00000532078 ZNF280CQ8ND82 737 aa18.6■□□□□ 0.57
DEPDC7-204ENST00000532078 MFRPQ9BY79 579 aa18.6■□□□□ 0.57
DEPDC7-204ENST00000532078 PCDH10Q9P2E7 1040 aa18.6■□□□□ 0.57
DEPDC7-204ENST00000532078 PI4KBQ9UBF8 816 aa18.6■□□□□ 0.57
DEPDC7-204ENST00000532078 BIN2Q9UBW5 565 aaPredicted RBP18.6■□□□□ 0.57
DEPDC7-204ENST00000532078 CDK5RAP2Q96SN8 1893 aa18.6■□□□□ 0.57
DEPDC7-204ENST00000532078 SIPA1L1O43166 1804 aa18.6■□□□□ 0.57
DEPDC7-204ENST00000532078 TNPO2O14787 897 aaKnown RBP18.59■□□□□ 0.57
DEPDC7-204ENST00000532078 ZBTB7BO15156 539 aaPredicted RBP18.59■□□□□ 0.57
DEPDC7-204ENST00000532078 CYP2E1P05181 493 aaPredicted RBP18.59■□□□□ 0.57
DEPDC7-204ENST00000532078 RLBP1P12271 317 aa18.59■□□□□ 0.57
DEPDC7-204ENST00000532078 PPP4CP60510 307 aa18.59■□□□□ 0.57
DEPDC7-204ENST00000532078 SPP2Q13103 211 aa18.59■□□□□ 0.57
DEPDC7-204ENST00000532078 PABPC4Q13310 644 aaKnown RBP eCLIP18.59■□□□□ 0.57
DEPDC7-204ENST00000532078 TREML2Q5T2D2 321 aa18.59■□□□□ 0.57
DEPDC7-204ENST00000532078 CEP290O15078 2479 aa18.58■□□□□ 0.57
DEPDC7-204ENST00000532078 FLT1P17948 1338 aa18.58■□□□□ 0.57
DEPDC7-204ENST00000532078 USP17L5A8MUK1 530 aa18.58■□□□□ 0.56
DEPDC7-204ENST00000532078 CCL5P13501 91 aa18.58■□□□□ 0.56
DEPDC7-204ENST00000532078 ZAP70P43403 619 aa18.58■□□□□ 0.56
DEPDC7-204ENST00000532078 FAM110CQ1W6H9 321 aa18.58■□□□□ 0.56
DEPDC7-204ENST00000532078 SHISA4Q96DD7 197 aa18.58■□□□□ 0.56
DEPDC7-204ENST00000532078 TRIM34Q9BYJ4 488 aa18.58■□□□□ 0.56
DEPDC7-204ENST00000532078 AS3MTQ9HBK9 375 aa18.58■□□□□ 0.56
DEPDC7-204ENST00000532078 DBNLQ9UJU6 430 aaKnown RBP18.58■□□□□ 0.56
DEPDC7-204ENST00000532078 GABRQQ9UN88 632 aa18.58■□□□□ 0.56
DEPDC7-204ENST00000532078 ZBED9Q6R2W3 1325 aa18.57■□□□□ 0.56
DEPDC7-204ENST00000532078 MYO5AQ9Y4I1 1855 aaKnown RBP18.57■□□□□ 0.56
DEPDC7-204ENST00000532078 GJB1P08034 283 aa18.57■□□□□ 0.56
DEPDC7-204ENST00000532078 HMGCS2P54868 508 aa18.57■□□□□ 0.56
DEPDC7-204ENST00000532078 HABP4Q5JVS0 413 aaKnown RBP18.57■□□□□ 0.56
DEPDC7-204ENST00000532078 ADGRA1Q86SQ6 560 aa18.57■□□□□ 0.56
DEPDC7-204ENST00000532078 MAPKAPK5Q8IW41 473 aa18.57■□□□□ 0.56
DEPDC7-204ENST00000532078 ANKRD13CQ8N6S4 541 aa18.57■□□□□ 0.56
DEPDC7-204ENST00000532078 FBXO22Q8NEZ5 403 aa18.57■□□□□ 0.56
DEPDC7-204ENST00000532078 TGFBRAP1Q8WUH2 860 aa18.57■□□□□ 0.56
DEPDC7-204ENST00000532078 RNF208Q9H0X6 261 aa18.57■□□□□ 0.56
DEPDC7-204ENST00000532078 PIH1D3Q9NQM4 214 aaKnown RBP18.57■□□□□ 0.56
DEPDC7-204ENST00000532078 TLR7Q9NYK1 1049 aaKnown RBP18.57■□□□□ 0.56
DEPDC7-204ENST00000532078 ADCY3O60266 1144 aa18.56■□□□□ 0.56
DEPDC7-204ENST00000532078 ASNSP08243 561 aa18.56■□□□□ 0.56
DEPDC7-204ENST00000532078 GJA8P48165 433 aa18.56■□□□□ 0.56
DEPDC7-204ENST00000532078 GCLCP48506 637 aaPredicted RBP18.56■□□□□ 0.56
DEPDC7-204ENST00000532078 FLT3LGP49771 235 aa18.56■□□□□ 0.56
DEPDC7-204ENST00000532078 IRF5Q13568 498 aa18.56■□□□□ 0.56
DEPDC7-204ENST00000532078 RRP1BQ14684 758 aaKnown RBP18.56■□□□□ 0.56
DEPDC7-204ENST00000532078 CEP85Q6P2H3 762 aa18.56■□□□□ 0.56
DEPDC7-204ENST00000532078 CERS3Q8IU89 383 aa18.56■□□□□ 0.56
DEPDC7-204ENST00000532078 CRACR2BQ8N4Y2 399 aaPredicted RBP18.56■□□□□ 0.56
DEPDC7-204ENST00000532078 COA7Q96BR5 231 aa18.56■□□□□ 0.56
DEPDC7-204ENST00000532078 SH3D19Q5HYK7 790 aa18.55■□□□□ 0.56
DEPDC7-204ENST00000532078 DIEXFQ68CQ4 756 aaKnown RBP18.55■□□□□ 0.56
DEPDC7-204ENST00000532078 ERC1Q8IUD2 1116 aa18.55■□□□□ 0.56
DEPDC7-204ENST00000532078 PXYLP1Q8TE99 480 aa18.55■□□□□ 0.56
DEPDC7-204ENST00000532078 EAF2Q96CJ1 260 aaPredicted RBP18.55■□□□□ 0.56
DEPDC7-204ENST00000532078 WDR18Q9BV38 432 aa18.55■□□□□ 0.56
DEPDC7-204ENST00000532078 CCDC8Q9H0W5 538 aaPredicted RBP18.55■□□□□ 0.56
DEPDC7-204ENST00000532078 IDH1O75874 414 aaKnown RBP18.54■□□□□ 0.56
DEPDC7-204ENST00000532078 HLA-DOAP06340 250 aa18.54■□□□□ 0.56
DEPDC7-204ENST00000532078 CYP7A1P22680 504 aa18.54■□□□□ 0.56
DEPDC7-204ENST00000532078 METTL16Q86W50 562 aaKnown RBP18.54■□□□□ 0.56
DEPDC7-204ENST00000532078 FOXP4Q8IVH2 680 aaPredicted RBP18.54■□□□□ 0.56
DEPDC7-204ENST00000532078 DNAJC18Q9H819 358 aa18.54■□□□□ 0.56
DEPDC7-204ENST00000532078 GINM1Q9NU53 330 aa18.54■□□□□ 0.56
DEPDC7-204ENST00000532078 INHAP05111 366 aa18.53■□□□□ 0.56
DEPDC7-204ENST00000532078 ELNP15502 786 aa18.53■□□□□ 0.56
DEPDC7-204ENST00000532078 MTMR2Q13614 643 aa18.53■□□□□ 0.56
DEPDC7-204ENST00000532078 TMED8Q6PL24 325 aaPredicted RBP18.53■□□□□ 0.56
DEPDC7-204ENST00000532078 UNC93B1Q9H1C4 597 aa18.53■□□□□ 0.56
DEPDC7-204ENST00000532078 ASCC2Q9H1I8 757 aaPredicted RBP18.53■□□□□ 0.56
DEPDC7-204ENST00000532078 TMOD4Q9NZQ9 345 aa18.53■□□□□ 0.56
DEPDC7-204ENST00000532078 PALD1Q9ULE6 856 aa18.53■□□□□ 0.56
DEPDC7-204ENST00000532078 BACE1P56817 501 aa18.52■□□□□ 0.56
DEPDC7-204ENST00000532078 IRX3P78415 501 aaPredicted RBP18.52■□□□□ 0.56
DEPDC7-204ENST00000532078 HSP90AB4PQ58FF6 505 aa18.52■□□□□ 0.56
DEPDC7-204ENST00000532078 AACSQ86V21 672 aa18.52■□□□□ 0.56
DEPDC7-204ENST00000532078 PANK1Q8TE04 598 aa18.52■□□□□ 0.56
DEPDC7-204ENST00000532078 U2AF1L4Q8WU68 220 aaKnown RBP18.52■□□□□ 0.56
DEPDC7-204ENST00000532078 SAP30BPQ9UHR5 308 aaKnown RBP18.52■□□□□ 0.56
DEPDC7-204ENST00000532078 EXOC6BQ9Y2D4 811 aa18.52■□□□□ 0.56
DEPDC7-204ENST00000532078 BOLA1Q9Y3E2 137 aa18.52■□□□□ 0.56
DEPDC7-204ENST00000532078 MS4A1P11836 297 aa18.51■□□□□ 0.55
DEPDC7-204ENST00000532078 CAPN2P17655 700 aa18.51■□□□□ 0.55
DEPDC7-204ENST00000532078 DYNLL1P63167 89 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms