RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 CAPNS2Q96L46 248 aa14.05□□□□□ -0.16
PPFIA1-220ENST00000532024 DNAJC18Q9H819 358 aa14.05□□□□□ -0.16
PPFIA1-220ENST00000532024 LAMA4Q16363 1823 aa14.05□□□□□ -0.16
PPFIA1-220ENST00000532024 SPDYE5A6NIY4 337 aa14.04□□□□□ -0.16
PPFIA1-220ENST00000532024 SLC10A3P09131 477 aa14.04□□□□□ -0.16
PPFIA1-220ENST00000532024 RNF20Q5VTR2 975 aa14.04□□□□□ -0.16
PPFIA1-220ENST00000532024 RASAL3Q86YV0 1011 aa14.04□□□□□ -0.16
PPFIA1-220ENST00000532024 ZNF444Q8N0Y2 327 aaPredicted RBP14.04□□□□□ -0.16
PPFIA1-220ENST00000532024 IL25Q9H293 177 aa14.04□□□□□ -0.16
PPFIA1-220ENST00000532024 AS3MTQ9HBK9 375 aa14.04□□□□□ -0.16
PPFIA1-220ENST00000532024 TOMM22Q9NS69 142 aa14.04□□□□□ -0.16
PPFIA1-220ENST00000532024 ZBTB21Q9ULJ3 1066 aa14.04□□□□□ -0.16
PPFIA1-220ENST00000532024 SNCAIPQ9Y6H5 919 aa14.04□□□□□ -0.16
PPFIA1-220ENST00000532024 CAPN15O75808 1086 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 GDF11O95390 407 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 HAND2P61296 217 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 HTRA3P83110 453 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 PPATQ06203 517 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 PPIL2Q13356 520 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 PPP4R3BQ5MIZ7 849 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 COL13A1Q5TAT6 717 aaPredicted RBP14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 CYP4F22Q6NT55 531 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 MFSD6Q6ZSS7 791 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 TMEM179Q6ZVK1 233 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 STK11IPQ8N1F8 1099 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 SLC44A5Q8NCS7 719 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 MAP4K1Q92918 833 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 OPTNQ96CV9 577 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 OTUD5Q96G74 571 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 WNK4Q96J92 1243 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 CNNM2Q9H8M5 875 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 RBM8AQ9Y5S9 174 aaKnown RBP14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 ATAD5Q96QE3 1844 aa14.03□□□□□ -0.16
PPFIA1-220ENST00000532024 WDR33Q9C0J8 1336 aaKnown RBP14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 USP17L5A8MUK1 530 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 EPB41L2O43491 1005 aaKnown RBP14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 ORC4O43929 436 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 GH2P01242 217 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 TSPY3P0CV98 308 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 TSPY8P0CW00 308 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 SLURP2P0DP57 97 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 PTPRAP18433 802 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 PTH1RQ03431 593 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 CTDSPL2Q05D32 466 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 SREBF2Q12772 1141 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 TRDNQ13061 729 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 RAB3GAP1Q15042 981 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 AKNAD1Q5T1N1 836 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 SPRYD7Q5W111 196 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 REM2Q8IYK8 340 aaPredicted RBP14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 LSG1Q9H089 658 aaKnown RBP14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 SH2D4AQ9H788 454 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 ZHX2Q9Y6X8 837 aa14.02□□□□□ -0.17
PPFIA1-220ENST00000532024 RASA1P20936 1047 aa14.01□□□□□ -0.17
PPFIA1-220ENST00000532024 MCCP23508 829 aa14.01□□□□□ -0.17
PPFIA1-220ENST00000532024 MAP2K2P36507 400 aa14.01□□□□□ -0.17
PPFIA1-220ENST00000532024 GTF2A2P52657 109 aa14.01□□□□□ -0.17
PPFIA1-220ENST00000532024 EVX2Q03828 476 aa14.01□□□□□ -0.17
PPFIA1-220ENST00000532024 SNAPC2Q13487 334 aa14.01□□□□□ -0.17
PPFIA1-220ENST00000532024 STAG1Q8WVM7 1258 aa14.01□□□□□ -0.17
PPFIA1-220ENST00000532024 ESR2Q92731 530 aa14.01□□□□□ -0.17
PPFIA1-220ENST00000532024 KRT23Q9C075 422 aa14.01□□□□□ -0.17
PPFIA1-220ENST00000532024 MANSC4A6NHS7 340 aaPredicted RBP14□□□□□ -0.17
PPFIA1-220ENST00000532024 TSPY2A6NKD2 308 aa14□□□□□ -0.17
PPFIA1-220ENST00000532024 RANBP6O60518 1105 aaKnown RBP14□□□□□ -0.17
PPFIA1-220ENST00000532024 PRDM1O75626 825 aa14□□□□□ -0.17
PPFIA1-220ENST00000532024 ZKSCAN1P17029 563 aaPredicted RBP14□□□□□ -0.17
PPFIA1-220ENST00000532024 VEGFBP49765 207 aa14□□□□□ -0.17
PPFIA1-220ENST00000532024 INHBEP58166 350 aa14□□□□□ -0.17
PPFIA1-220ENST00000532024 RRP12Q5JTH9 1297 aaKnown RBP14□□□□□ -0.17
PPFIA1-220ENST00000532024 RALYLQ86SE5 291 aaKnown RBP14□□□□□ -0.17
PPFIA1-220ENST00000532024 TNS4Q8IZW8 715 aa14□□□□□ -0.17
PPFIA1-220ENST00000532024 ZNF280CQ8ND82 737 aa14□□□□□ -0.17
PPFIA1-220ENST00000532024 FEZ1Q99689 392 aa14□□□□□ -0.17
PPFIA1-220ENST00000532024 KANSL2Q9H9L4 492 aa14□□□□□ -0.17
PPFIA1-220ENST00000532024 ARHGEF10LQ9HCE6 1279 aa14□□□□□ -0.17
PPFIA1-220ENST00000532024 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14□□□□□ -0.17
PPFIA1-220ENST00000532024 FAM155AB1AL88 458 aaPredicted RBP13.99□□□□□ -0.17
PPFIA1-220ENST00000532024 CXCL11O14625 94 aa13.99□□□□□ -0.17
PPFIA1-220ENST00000532024 FGRP09769 529 aa13.99□□□□□ -0.17
PPFIA1-220ENST00000532024 CETPP11597 493 aa13.99□□□□□ -0.17
PPFIA1-220ENST00000532024 AKR1B1P15121 316 aa13.99□□□□□ -0.17
PPFIA1-220ENST00000532024 ICA1Q05084 483 aa13.99□□□□□ -0.17
PPFIA1-220ENST00000532024 MKRN3Q13064 507 aaKnown RBP13.99□□□□□ -0.17
PPFIA1-220ENST00000532024 RRP1BQ14684 758 aaKnown RBP13.99□□□□□ -0.17
PPFIA1-220ENST00000532024 TBC1D10CQ8IV04 446 aa13.99□□□□□ -0.17
PPFIA1-220ENST00000532024 WDR18Q9BV38 432 aa13.99□□□□□ -0.17
PPFIA1-220ENST00000532024 THSD7BQ9C0I4 1608 aa13.99□□□□□ -0.17
PPFIA1-220ENST00000532024 PCNTO95613 3336 aa13.99□□□□□ -0.17
PPFIA1-220ENST00000532024 PLIN4Q96Q06 1357 aa13.98□□□□□ -0.17
PPFIA1-220ENST00000532024 TRIM75PA6NK02 468 aa13.98□□□□□ -0.17
PPFIA1-220ENST00000532024 SMIM22K7EJ46 135 aa13.98□□□□□ -0.17
PPFIA1-220ENST00000532024 IRF6O14896 467 aa13.98□□□□□ -0.17
PPFIA1-220ENST00000532024 CYP21A2P08686 494 aa13.98□□□□□ -0.17
PPFIA1-220ENST00000532024 USP14P54578 494 aa13.98□□□□□ -0.17
PPFIA1-220ENST00000532024 TFAP4Q01664 338 aa13.98□□□□□ -0.17
PPFIA1-220ENST00000532024 KRT32Q14532 448 aa13.98□□□□□ -0.17
PPFIA1-220ENST00000532024 SEPT2Q15019 361 aa13.98□□□□□ -0.17
PPFIA1-220ENST00000532024 CCDC178Q5BJE1 867 aa13.98□□□□□ -0.17
PPFIA1-220ENST00000532024 OTUD7BQ6GQQ9 843 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms