RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 DIRC2Q96SL1 478 aa9.08□□□□□ -0.96
PTPRK-220ENST00000531466 SRCIN1Q9C0H9 1055 aa9.08□□□□□ -0.96
PTPRK-220ENST00000531466 C22orf34Q6ZV56 151 aa9.07□□□□□ -0.96
PTPRK-220ENST00000531466 RIN3Q8TB24 985 aa9.07□□□□□ -0.96
PTPRK-220ENST00000531466 NSUN3Q9H649 340 aaKnown RBP9.07□□□□□ -0.96
PTPRK-220ENST00000531466 CYP8B1Q9UNU6 501 aa9.07□□□□□ -0.96
PTPRK-220ENST00000531466 CAPN6Q9Y6Q1 641 aa9.07□□□□□ -0.96
PTPRK-220ENST00000531466 CBX7O95931 251 aa9.06□□□□□ -0.96
PTPRK-220ENST00000531466 C1QTNF9P0C862 333 aa9.06□□□□□ -0.96
PTPRK-220ENST00000531466 SCARA3Q6AZY7 606 aa9.06□□□□□ -0.96
PTPRK-220ENST00000531466 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.06□□□□□ -0.96
PTPRK-220ENST00000531466 HDXQ7Z353 690 aa9.06□□□□□ -0.96
PTPRK-220ENST00000531466 FBF1Q8TES7 1133 aa9.06□□□□□ -0.96
PTPRK-220ENST00000531466 KCNK12Q9HB15 430 aa9.06□□□□□ -0.96
PTPRK-220ENST00000531466 ST14Q9Y5Y6 855 aa9.06□□□□□ -0.96
PTPRK-220ENST00000531466 KRT1P04264 644 aa9.05□□□□□ -0.96
PTPRK-220ENST00000531466 CDK8P49336 464 aa9.05□□□□□ -0.96
PTPRK-220ENST00000531466 ETF1P62495 437 aaKnown RBP9.05□□□□□ -0.96
PTPRK-220ENST00000531466 WNT10AQ9GZT5 417 aa9.05□□□□□ -0.96
PTPRK-220ENST00000531466 WWC3Q9ULE0 1092 aa9.05□□□□□ -0.96
PTPRK-220ENST00000531466 NFIBO00712 420 aa9.04□□□□□ -0.96
PTPRK-220ENST00000531466 ZSCAN22P10073 491 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-220ENST00000531466 LETMD1Q6P1Q0 360 aa9.04□□□□□ -0.96
PTPRK-220ENST00000531466 FBXO15Q8NCQ5 510 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-220ENST00000531466 XAGE3Q8WTP9 111 aa9.04□□□□□ -0.96
PTPRK-220ENST00000531466 UBE2FQ969M7 185 aa9.04□□□□□ -0.96
PTPRK-220ENST00000531466 GAL3ST3Q96A11 431 aa9.04□□□□□ -0.96
PTPRK-220ENST00000531466 SLAMF8Q9P0V8 285 aa9.04□□□□□ -0.96
PTPRK-220ENST00000531466 PDE4CQ08493 712 aa9.03□□□□□ -0.96
PTPRK-220ENST00000531466 WIPI1Q5MNZ9 446 aaPredicted RBP9.03□□□□□ -0.96
PTPRK-220ENST00000531466 MFSD2AQ8NA29 543 aa9.03□□□□□ -0.96
PTPRK-220ENST00000531466 ALPK1Q96QP1 1244 aa9.03□□□□□ -0.96
PTPRK-220ENST00000531466 ZSWIM5Q9P217 1185 aa9.03□□□□□ -0.96
PTPRK-220ENST00000531466 GNEQ9Y223 722 aaKnown RBP9.03□□□□□ -0.96
PTPRK-220ENST00000531466 CAP2P40123 477 aa9.02□□□□□ -0.97
PTPRK-220ENST00000531466 FMR1Q06787 632 aaKnown RBP eCLIP9.02□□□□□ -0.97
PTPRK-220ENST00000531466 PRAMEF13Q5VWM6 474 aa9.02□□□□□ -0.97
PTPRK-220ENST00000531466 ANKRD24Q8TF21 1146 aa9.02□□□□□ -0.97
PTPRK-220ENST00000531466 GIPC1O14908 333 aa9.01□□□□□ -0.97
PTPRK-220ENST00000531466 USP17L7P0C7H9 530 aa9.01□□□□□ -0.97
PTPRK-220ENST00000531466 ALG1LQ6GMV1 187 aa9.01□□□□□ -0.97
PTPRK-220ENST00000531466 THAP5Q7Z6K1 395 aa9.01□□□□□ -0.97
PTPRK-220ENST00000531466 TTC6Q86TZ1 520 aa9.01□□□□□ -0.97
PTPRK-220ENST00000531466 HID1Q8IV36 788 aa9.01□□□□□ -0.97
PTPRK-220ENST00000531466 CCDC120Q96HB5 630 aa9.01□□□□□ -0.97
PTPRK-220ENST00000531466 NPIPB6E9PJ23 425 aa9□□□□□ -0.97
PTPRK-220ENST00000531466 GRK4P32298 578 aa9□□□□□ -0.97
PTPRK-220ENST00000531466 ZNF746Q6NUN9 644 aaPredicted RBP9□□□□□ -0.97
PTPRK-220ENST00000531466 C12orf49Q9H741 205 aa9□□□□□ -0.97
PTPRK-220ENST00000531466 TTF2Q9UNY4 1162 aaKnown RBP9□□□□□ -0.97
PTPRK-220ENST00000531466 SPG7Q9UQ90 795 aa9□□□□□ -0.97
PTPRK-220ENST00000531466 DNAJC25-GNG10A0A024R161 153 aa8.99□□□□□ -0.97
PTPRK-220ENST00000531466 CST3P01034 146 aaPredicted RBP8.99□□□□□ -0.97
PTPRK-220ENST00000531466 RAC2P15153 192 aa8.99□□□□□ -0.97
PTPRK-220ENST00000531466 TNK2Q07912 1038 aa8.99□□□□□ -0.97
PTPRK-220ENST00000531466 RALGPS1Q5JS13 557 aa8.99□□□□□ -0.97
PTPRK-220ENST00000531466 LILRA6Q6PI73 481 aa8.99□□□□□ -0.97
PTPRK-220ENST00000531466 CDH24Q86UP0 819 aa8.99□□□□□ -0.97
PTPRK-220ENST00000531466 SIAH1Q8IUQ4 282 aa8.99□□□□□ -0.97
PTPRK-220ENST00000531466 ABHD4Q8TB40 342 aa8.99□□□□□ -0.97
PTPRK-220ENST00000531466 EPB41L4BQ9H329 900 aa8.99□□□□□ -0.97
PTPRK-220ENST00000531466 DCP1AQ9NPI6 582 aaPredicted RBP8.99□□□□□ -0.97
PTPRK-220ENST00000531466 FAM8A1Q9UBU6 413 aa8.99□□□□□ -0.97
PTPRK-220ENST00000531466 SNCAIPQ9Y6H5 919 aa8.99□□□□□ -0.97
PTPRK-220ENST00000531466 TMEM253P0C7T8 217 aa8.98□□□□□ -0.97
PTPRK-220ENST00000531466 ERVFC1P60507 584 aa8.98□□□□□ -0.97
PTPRK-220ENST00000531466 KRTAP4-11Q9BYQ6 195 aa8.98□□□□□ -0.97
PTPRK-220ENST00000531466 HK2P52789 917 aa8.97□□□□□ -0.97
PTPRK-220ENST00000531466 ATP2B2Q01814 1243 aa8.97□□□□□ -0.97
PTPRK-220ENST00000531466 TTBK2Q6IQ55 1244 aa8.97□□□□□ -0.97
PTPRK-220ENST00000531466 SV2BQ7L1I2 683 aa8.97□□□□□ -0.97
PTPRK-220ENST00000531466 ZSCAN29Q8IWY8 852 aaPredicted RBP8.97□□□□□ -0.97
PTPRK-220ENST00000531466 DPH2Q9BQC3 489 aaPredicted RBP8.97□□□□□ -0.97
PTPRK-220ENST00000531466 WASH4PA8MWX3 477 aa8.96□□□□□ -0.98
PTPRK-220ENST00000531466 ESR1P03372 595 aa8.96□□□□□ -0.98
PTPRK-220ENST00000531466 CYP7A1P22680 504 aa8.96□□□□□ -0.98
PTPRK-220ENST00000531466 KIR3DL1P43629 444 aa8.96□□□□□ -0.98
PTPRK-220ENST00000531466 ATG14Q6ZNE5 492 aa8.96□□□□□ -0.98
PTPRK-220ENST00000531466 SEPT6Q14141 434 aa8.95□□□□□ -0.98
PTPRK-220ENST00000531466 MYLIPQ8WY64 445 aa8.95□□□□□ -0.98
PTPRK-220ENST00000531466 CD320Q9NPF0 282 aa8.95□□□□□ -0.98
PTPRK-220ENST00000531466 TMEM59LQ9UK28 342 aa8.95□□□□□ -0.98
PTPRK-220ENST00000531466 PCDHB5Q9Y5E4 795 aa8.95□□□□□ -0.98
PTPRK-220ENST00000531466 KCNA10Q16322 511 aa8.94□□□□□ -0.98
PTPRK-220ENST00000531466 TMPRSS7Q7RTY8 843 aa8.94□□□□□ -0.98
PTPRK-220ENST00000531466 ADAMTS10Q9H324 1103 aa8.94□□□□□ -0.98
PTPRK-220ENST00000531466 TCAF2A6NFQ2 919 aa8.93□□□□□ -0.98
PTPRK-220ENST00000531466 ETV2O00321 342 aaPredicted RBP8.93□□□□□ -0.98
PTPRK-220ENST00000531466 TRHRP34981 398 aaPredicted RBP8.93□□□□□ -0.98
PTPRK-220ENST00000531466 TTLL10Q6ZVT0 673 aa8.93□□□□□ -0.98
PTPRK-220ENST00000531466 CREG2Q8IUH2 290 aa8.93□□□□□ -0.98
PTPRK-220ENST00000531466 COX4I2Q96KJ9 171 aa8.93□□□□□ -0.98
PTPRK-220ENST00000531466 ASB16Q96NS5 453 aa8.93□□□□□ -0.98
PTPRK-220ENST00000531466 TJP2Q9UDY2 1190 aa8.93□□□□□ -0.98
PTPRK-220ENST00000531466 GFRA2O00451 464 aa8.92□□□□□ -0.98
PTPRK-220ENST00000531466 BRD1O95696 1058 aa8.92□□□□□ -0.98
PTPRK-220ENST00000531466 LMNB1P20700 586 aa8.92□□□□□ -0.98
PTPRK-220ENST00000531466 CIAPIN1Q6FI81 312 aa8.92□□□□□ -0.98
PTPRK-220ENST00000531466 PIWIL2Q8TC59 973 aaKnown RBP8.92□□□□□ -0.98
PTPRK-220ENST00000531466 HPXP02790 462 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms