RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 FUT2Q10981 343 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 FOXD4L6Q3SYB3 417 aaPredicted RBP12.73□□□□□ -0.37
SRPRA-205ENST00000531104 CCDC178Q5BJE1 867 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 FAM47AQ5JRC9 791 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 IFIT1BQ5T764 474 aaKnown RBP12.73□□□□□ -0.37
SRPRA-205ENST00000531104 SOGA3Q5TF21 947 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 ATL3Q6DD88 541 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 CDC42EP5Q6NZY7 148 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 FOXD4L3Q6VB84 417 aaPredicted RBP12.73□□□□□ -0.37
SRPRA-205ENST00000531104 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
SRPRA-205ENST00000531104 DGKHQ86XP1 1220 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 FBXW7Q969H0 707 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 C8orf76Q96K31 380 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 MAP3K14Q99558 947 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 DDX4Q9NQI0 724 aaKnown RBP12.73□□□□□ -0.37
SRPRA-205ENST00000531104 IL17RBQ9NRM6 502 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 SAP30BPQ9UHR5 308 aaKnown RBP12.73□□□□□ -0.37
SRPRA-205ENST00000531104 COL4A5P29400 1685 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 F8W031 263 aaPredicted RBP12.72□□□□□ -0.37
SRPRA-205ENST00000531104 PPIP5K2O43314 1243 aa12.72□□□□□ -0.37
SRPRA-205ENST00000531104 CDK8P49336 464 aa12.72□□□□□ -0.37
SRPRA-205ENST00000531104 SCNN1DP51172 638 aa12.72□□□□□ -0.37
SRPRA-205ENST00000531104 UBE2HP62256 183 aa12.72□□□□□ -0.37
SRPRA-205ENST00000531104 TFAP4Q01664 338 aa12.72□□□□□ -0.37
SRPRA-205ENST00000531104 SSRP1Q08945 709 aaKnown RBP12.72□□□□□ -0.37
SRPRA-205ENST00000531104 FAM173BQ6P4H8 233 aa12.72□□□□□ -0.37
SRPRA-205ENST00000531104 CATIPQ7Z7H3 387 aa12.72□□□□□ -0.37
SRPRA-205ENST00000531104 TTC6Q86TZ1 520 aa12.72□□□□□ -0.37
SRPRA-205ENST00000531104 CCDC144CPQ8IYA2 1237 aa12.72□□□□□ -0.37
SRPRA-205ENST00000531104 CRACR2BQ8N4Y2 399 aaPredicted RBP12.72□□□□□ -0.37
SRPRA-205ENST00000531104 SCAND2PQ9GZW5 306 aaPredicted RBP12.72□□□□□ -0.37
SRPRA-205ENST00000531104 ZNF287Q9HBT7 754 aa12.72□□□□□ -0.37
SRPRA-205ENST00000531104 USP40Q9NVE5 1235 aa12.72□□□□□ -0.37
SRPRA-205ENST00000531104 RBM28Q9NW13 759 aaKnown RBP12.72□□□□□ -0.37
SRPRA-205ENST00000531104 SERPINA10Q9UK55 444 aa12.72□□□□□ -0.37
SRPRA-205ENST00000531104 PLIN4Q96Q06 1357 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 MYO3BQ8WXR4 1341 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 TSPY2A6NKD2 308 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 NMT2O60551 498 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 PPFIA3O75145 1194 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 POLD1P28340 1107 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 ZNF445P59923 1031 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 SLC44A5Q8NCS7 719 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 NEDD1Q8NHV4 660 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 WASF1Q92558 559 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 UPF1Q92900 1129 aaKnown RBP eCLIP12.71□□□□□ -0.37
SRPRA-205ENST00000531104 PHKBQ93100 1093 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 GMLQ99445 158 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 ALG1Q9BT22 464 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 IDI2Q9BXS1 227 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 GZF1Q9H116 711 aaPredicted RBP12.71□□□□□ -0.37
SRPRA-205ENST00000531104 PIM2Q9P1W9 311 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 TAOK2Q9UL54 1235 aa12.71□□□□□ -0.37
SRPRA-205ENST00000531104 ISY1Q9ULR0 285 aaKnown RBP12.71□□□□□ -0.37
SRPRA-205ENST00000531104 FIBPO43427 364 aa12.7□□□□□ -0.38
SRPRA-205ENST00000531104 VIL1P09327 827 aaKnown RBP12.7□□□□□ -0.38
SRPRA-205ENST00000531104 KIF23Q02241 960 aaPredicted RBP12.7□□□□□ -0.38
SRPRA-205ENST00000531104 OTUD7BQ6GQQ9 843 aa12.7□□□□□ -0.38
SRPRA-205ENST00000531104 BRAPQ7Z569 592 aa12.7□□□□□ -0.38
SRPRA-205ENST00000531104 ZNF444Q8N0Y2 327 aaPredicted RBP12.7□□□□□ -0.38
SRPRA-205ENST00000531104 LEO1Q8WVC0 666 aaPredicted RBP12.7□□□□□ -0.38
SRPRA-205ENST00000531104 AIFM3Q96NN9 605 aa12.7□□□□□ -0.38
SRPRA-205ENST00000531104 RNF26Q9BY78 433 aaPredicted RBP12.7□□□□□ -0.38
SRPRA-205ENST00000531104 OSBPL5Q9H0X9 879 aaPredicted RBP12.7□□□□□ -0.38
SRPRA-205ENST00000531104 MKNK2Q9HBH9 465 aa12.7□□□□□ -0.38
SRPRA-205ENST00000531104 TMEM63CQ9P1W3 806 aa12.7□□□□□ -0.38
SRPRA-205ENST00000531104 RCOR1Q9UKL0 485 aa12.7□□□□□ -0.38
SRPRA-205ENST00000531104 ATF5Q9Y2D1 282 aaPredicted RBP12.7□□□□□ -0.38
SRPRA-205ENST00000531104 FER1L6Q2WGJ9 1857 aa12.7□□□□□ -0.38
SRPRA-205ENST00000531104 IGKV6D-41A0A0C4DH26 115 aa12.69□□□□□ -0.38
SRPRA-205ENST00000531104 PRPF3O43395 683 aaKnown RBP12.69□□□□□ -0.38
SRPRA-205ENST00000531104 DEXIO95424 95 aa12.69□□□□□ -0.38
SRPRA-205ENST00000531104 NCLP19338 710 aaKnown RBP12.69□□□□□ -0.38
SRPRA-205ENST00000531104 FOSBP53539 338 aa12.69□□□□□ -0.38
SRPRA-205ENST00000531104 GUCY1B3Q02153 619 aa12.69□□□□□ -0.38
SRPRA-205ENST00000531104 SLC4A8Q2Y0W8 1093 aa12.69□□□□□ -0.38
SRPRA-205ENST00000531104 KRT40Q6A162 431 aa12.69□□□□□ -0.38
SRPRA-205ENST00000531104 CAVIN1Q6NZI2 390 aaKnown RBP12.69□□□□□ -0.38
SRPRA-205ENST00000531104 TMTC3Q6ZXV5 915 aa12.69□□□□□ -0.38
SRPRA-205ENST00000531104 KIAA0825Q8IV33 1275 aa12.69□□□□□ -0.38
SRPRA-205ENST00000531104 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
SRPRA-205ENST00000531104 NUP133Q8WUM0 1156 aa12.69□□□□□ -0.38
SRPRA-205ENST00000531104 SLC26A6Q9BXS9 759 aa12.69□□□□□ -0.38
SRPRA-205ENST00000531104 EHD4Q9H223 541 aa12.69□□□□□ -0.38
SRPRA-205ENST00000531104 TFIP11Q9UBB9 837 aaKnown RBP12.69□□□□□ -0.38
SRPRA-205ENST00000531104 CFAP45Q9UL16 551 aa12.69□□□□□ -0.38
SRPRA-205ENST00000531104 CD2APQ9Y5K6 639 aa12.69□□□□□ -0.38
SRPRA-205ENST00000531104 COL2A1P02458 1487 aaPredicted RBP12.69□□□□□ -0.38
SRPRA-205ENST00000531104 SIPA1L1O43166 1804 aa12.69□□□□□ -0.38
SRPRA-205ENST00000531104 KIF28PB7ZC32 967 aa12.68□□□□□ -0.38
SRPRA-205ENST00000531104 UBE2Q2LH0YL09 131 aa12.68□□□□□ -0.38
SRPRA-205ENST00000531104 TSPY3P0CV98 308 aa12.68□□□□□ -0.38
SRPRA-205ENST00000531104 TSPY8P0CW00 308 aa12.68□□□□□ -0.38
SRPRA-205ENST00000531104 U2AF2P26368 475 aaKnown RBP eCLIP12.68□□□□□ -0.38
SRPRA-205ENST00000531104 GUCY1A2P33402 732 aa12.68□□□□□ -0.38
SRPRA-205ENST00000531104 PTGER2P43116 358 aa12.68□□□□□ -0.38
SRPRA-205ENST00000531104 GRM4Q14833 912 aa12.68□□□□□ -0.38
SRPRA-205ENST00000531104 R3HDM1Q15032 1099 aaKnown RBP12.68□□□□□ -0.38
SRPRA-205ENST00000531104 PKN1Q16512 942 aa12.68□□□□□ -0.38
SRPRA-205ENST00000531104 ZSCAN23Q3MJ62 389 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms