RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.63□□□□□ -0.55
CTNND1-228ENST00000531007 GRXCR2A6NFK2 248 aa11.62□□□□□ -0.55
CTNND1-228ENST00000531007 YDJCA8MPS7 323 aa11.62□□□□□ -0.55
CTNND1-228ENST00000531007 NFKBIEO00221 500 aa11.62□□□□□ -0.55
CTNND1-228ENST00000531007 EVCP57679 992 aa11.62□□□□□ -0.55
CTNND1-228ENST00000531007 FGD1P98174 961 aa11.62□□□□□ -0.55
CTNND1-228ENST00000531007 GRIK5Q16478 980 aa11.62□□□□□ -0.55
CTNND1-228ENST00000531007 CCDC178Q5BJE1 867 aa11.62□□□□□ -0.55
CTNND1-228ENST00000531007 CTR9Q6PD62 1173 aa11.62□□□□□ -0.55
CTNND1-228ENST00000531007 STOX1Q6ZVD7 989 aa11.62□□□□□ -0.55
CTNND1-228ENST00000531007 MB21D2Q8IYB1 491 aaPredicted RBP11.62□□□□□ -0.55
CTNND1-228ENST00000531007 MTMR14Q8NCE2 650 aa11.62□□□□□ -0.55
CTNND1-228ENST00000531007 NLGN2Q8NFZ4 835 aa11.62□□□□□ -0.55
CTNND1-228ENST00000531007 ESR2Q92731 530 aa11.62□□□□□ -0.55
CTNND1-228ENST00000531007 TMX3Q96JJ7 454 aa11.62□□□□□ -0.55
CTNND1-228ENST00000531007 MCM9Q9NXL9 1143 aa11.62□□□□□ -0.55
CTNND1-228ENST00000531007 ROBO3Q96MS0 1386 aa11.62□□□□□ -0.55
CTNND1-228ENST00000531007 ZNF646O15015 1829 aaPredicted RBP11.61□□□□□ -0.55
CTNND1-228ENST00000531007 ERICH2A1L162 156 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 USP17L12C9JPN9 530 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 USP17L21D6R901 530 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 MAP3K7O43318 606 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 ORC4O43929 436 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 CD2BP2O95400 341 aaKnown RBP11.61□□□□□ -0.55
CTNND1-228ENST00000531007 COL9A1P20849 921 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 LIFRP42702 1097 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 RCAN1P53805 252 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 EIF6P56537 245 aaKnown RBP11.61□□□□□ -0.55
CTNND1-228ENST00000531007 HAND2P61296 217 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 GPR162Q16538 588 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 C12orf60Q5U649 245 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 CIAPIN1Q6FI81 312 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 Q6ZUG5 572 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 TTC6Q86TZ1 520 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 SH3RF3Q8TEJ3 882 aaPredicted RBP11.61□□□□□ -0.55
CTNND1-228ENST00000531007 ZNF274Q96GC6 653 aaPredicted RBP11.61□□□□□ -0.55
CTNND1-228ENST00000531007 GMLQ99445 158 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 IDI2Q9BXS1 227 aa11.61□□□□□ -0.55
CTNND1-228ENST00000531007 DHX36Q9H2U1 1008 aaKnown RBP11.61□□□□□ -0.55
CTNND1-228ENST00000531007 SCN9AQ15858 1988 aa11.6□□□□□ -0.55
CTNND1-228ENST00000531007 COL2A1P02458 1487 aaPredicted RBP11.6□□□□□ -0.55
CTNND1-228ENST00000531007 MINDY4BA8MYZ0 360 aa11.6□□□□□ -0.55
CTNND1-228ENST00000531007 FZD9O00144 591 aa11.6□□□□□ -0.55
CTNND1-228ENST00000531007 PSMD14O00487 310 aa11.6□□□□□ -0.55
CTNND1-228ENST00000531007 PRC1O43663 620 aa11.6□□□□□ -0.55
CTNND1-228ENST00000531007 LMNB1P20700 586 aa11.6□□□□□ -0.55
CTNND1-228ENST00000531007 FKBP1CQ5VVH2 108 aa11.6□□□□□ -0.55
CTNND1-228ENST00000531007 APOBEC3HQ6NTF7 200 aaKnown RBP11.6□□□□□ -0.55
CTNND1-228ENST00000531007 TBC1D10CQ8IV04 446 aa11.6□□□□□ -0.55
CTNND1-228ENST00000531007 KIAA0825Q8IV33 1275 aa11.6□□□□□ -0.55
CTNND1-228ENST00000531007 TGFBRAP1Q8WUH2 860 aa11.6□□□□□ -0.55
CTNND1-228ENST00000531007 DPF2Q92785 391 aa11.6□□□□□ -0.55
CTNND1-228ENST00000531007 NBPF3Q9H094 633 aa11.6□□□□□ -0.55
CTNND1-228ENST00000531007 USP40Q9NVE5 1235 aa11.6□□□□□ -0.55
CTNND1-228ENST00000531007 TAF6LQ9Y6J9 622 aa11.6□□□□□ -0.55
CTNND1-228ENST00000531007 FLT1P17948 1338 aa11.6□□□□□ -0.55
CTNND1-228ENST00000531007 LAMB1P07942 1786 aa11.59□□□□□ -0.55
CTNND1-228ENST00000531007 FOCADQ5VW36 1801 aa11.59□□□□□ -0.55
CTNND1-228ENST00000531007 F8W031 263 aaPredicted RBP11.59□□□□□ -0.55
CTNND1-228ENST00000531007 DHX16O60231 1041 aaKnown RBP11.59□□□□□ -0.55
CTNND1-228ENST00000531007 ENTPD3O75355 529 aa11.59□□□□□ -0.55
CTNND1-228ENST00000531007 POLR3DP05423 398 aaPredicted RBP11.59□□□□□ -0.55
CTNND1-228ENST00000531007 USP17L8P0C7I0 530 aa11.59□□□□□ -0.55
CTNND1-228ENST00000531007 CXCL9Q07325 125 aa11.59□□□□□ -0.55
CTNND1-228ENST00000531007 TOB2Q14106 344 aaPredicted RBP11.59□□□□□ -0.55
CTNND1-228ENST00000531007 PPP2R5BQ15173 497 aa11.59□□□□□ -0.55
CTNND1-228ENST00000531007 SGMS1Q86VZ5 419 aa11.59□□□□□ -0.55
CTNND1-228ENST00000531007 IQCA1Q86XH1 822 aa11.59□□□□□ -0.55
CTNND1-228ENST00000531007 LLPHQ9BRT6 129 aaKnown RBP11.59□□□□□ -0.55
CTNND1-228ENST00000531007 KCNQ5Q9NR82 932 aa11.59□□□□□ -0.55
CTNND1-228ENST00000531007 TMOD2Q9NZR1 351 aa11.59□□□□□ -0.55
CTNND1-228ENST00000531007 CHMP5Q9NZZ3 219 aa11.59□□□□□ -0.55
CTNND1-228ENST00000531007 SWAP70Q9UH65 585 aa11.59□□□□□ -0.55
CTNND1-228ENST00000531007 ANGEL1Q9UNK9 670 aaKnown RBP11.59□□□□□ -0.55
CTNND1-228ENST00000531007 NAV1Q8NEY1 1877 aa11.58□□□□□ -0.56
CTNND1-228ENST00000531007 BHMG1C9JSJ3 638 aaPredicted RBP11.58□□□□□ -0.56
CTNND1-228ENST00000531007 MYO1BO43795 1136 aa11.58□□□□□ -0.56
CTNND1-228ENST00000531007 WDHD1O75717 1129 aaPredicted RBP11.58□□□□□ -0.56
CTNND1-228ENST00000531007 RAD17O75943 681 aa11.58□□□□□ -0.56
CTNND1-228ENST00000531007 HLA-DOAP06340 250 aa11.58□□□□□ -0.56
CTNND1-228ENST00000531007 SLC4A3P48751 1232 aa11.58□□□□□ -0.56
CTNND1-228ENST00000531007 SCNN1DP51172 638 aa11.58□□□□□ -0.56
CTNND1-228ENST00000531007 RBM5P52756 815 aaKnown RBP eCLIP11.58□□□□□ -0.56
CTNND1-228ENST00000531007 NUCB2P80303 420 aa11.58□□□□□ -0.56
CTNND1-228ENST00000531007 CTDSPL2Q05D32 466 aa11.58□□□□□ -0.56
CTNND1-228ENST00000531007 DLGAP5Q15398 846 aa11.58□□□□□ -0.56
CTNND1-228ENST00000531007 CFAP100Q494V2 611 aa11.58□□□□□ -0.56
CTNND1-228ENST00000531007 CDC42EP5Q6NZY7 148 aa11.58□□□□□ -0.56
CTNND1-228ENST00000531007 UBAC1Q9BSL1 405 aa11.58□□□□□ -0.56
CTNND1-228ENST00000531007 EHD4Q9H223 541 aa11.58□□□□□ -0.56
CTNND1-228ENST00000531007 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.58□□□□□ -0.56
CTNND1-228ENST00000531007 KIF3AQ9Y496 699 aa11.58□□□□□ -0.56
CTNND1-228ENST00000531007 B4E1Z4 1266 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 SH2B2O14492 632 aaPredicted RBP11.57□□□□□ -0.56
CTNND1-228ENST00000531007 PFKFB2O60825 505 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 KDM4AO75164 1064 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 CPA1P15085 419 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 DDIT3P35638 169 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 SYNE3Q6ZMZ3 975 aa11.57□□□□□ -0.56
CTNND1-228ENST00000531007 ARHGAP27Q6ZUM4 889 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms