RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 SPP2Q13103 211 aa22.52■■□□□ 1.2
GMDS-208ENST00000530927 TATDN1Q6P1N9 297 aa22.52■■□□□ 1.2
GMDS-208ENST00000530927 GADL1Q6ZQY3 521 aa22.52■■□□□ 1.2
GMDS-208ENST00000530927 CCDC129Q6ZRS4 1044 aa22.52■■□□□ 1.2
GMDS-208ENST00000530927 ATP8A2Q9NTI2 1148 aa22.52■■□□□ 1.2
GMDS-208ENST00000530927 ZBTB21Q9ULJ3 1066 aa22.52■■□□□ 1.2
GMDS-208ENST00000530927 USP17L12C9JPN9 530 aa22.51■■□□□ 1.19
GMDS-208ENST00000530927 USP17L21D6R901 530 aa22.51■■□□□ 1.19
GMDS-208ENST00000530927 GH2P01242 217 aa22.51■■□□□ 1.19
GMDS-208ENST00000530927 ZFYP08048 801 aaPredicted RBP22.51■■□□□ 1.19
GMDS-208ENST00000530927 EPB41L4AQ9HCS5 686 aaPredicted RBP22.51■■□□□ 1.19
GMDS-208ENST00000530927 USP17L5A8MUK1 530 aa22.5■■□□□ 1.19
GMDS-208ENST00000530927 GSG1L2A8MUP6 293 aa22.5■■□□□ 1.19
GMDS-208ENST00000530927 PDHXO00330 501 aa22.5■■□□□ 1.19
GMDS-208ENST00000530927 ZMYM1Q5SVZ6 1142 aa22.5■■□□□ 1.19
GMDS-208ENST00000530927 CTR9Q6PD62 1173 aa22.5■■□□□ 1.19
GMDS-208ENST00000530927 EVI5LQ96CN4 794 aa22.5■■□□□ 1.19
GMDS-208ENST00000530927 MCOLN1Q9GZU1 580 aa22.5■■□□□ 1.19
GMDS-208ENST00000530927 TREML2Q5T2D2 321 aa22.49■■□□□ 1.19
GMDS-208ENST00000530927 ANKRD23Q86SG2 305 aa22.49■■□□□ 1.19
GMDS-208ENST00000530927 STK11IPQ8N1F8 1099 aa22.49■■□□□ 1.19
GMDS-208ENST00000530927 ZNF280CQ8ND82 737 aa22.49■■□□□ 1.19
GMDS-208ENST00000530927 ZSWIM8A7E2V4 1837 aa22.49■■□□□ 1.19
GMDS-208ENST00000530927 TRIM6-TRIM34B2RNG4 842 aa22.48■■□□□ 1.19
GMDS-208ENST00000530927 FKTNO75072 461 aa22.48■■□□□ 1.19
GMDS-208ENST00000530927 ECM2O94769 699 aaPredicted RBP22.48■■□□□ 1.19
GMDS-208ENST00000530927 ASNSP08243 561 aa22.48■■□□□ 1.19
GMDS-208ENST00000530927 CYP2C8P10632 490 aa22.48■■□□□ 1.19
GMDS-208ENST00000530927 HMGCS2P54868 508 aa22.48■■□□□ 1.19
GMDS-208ENST00000530927 CERKLQ49MI3 558 aaPredicted RBP22.48■■□□□ 1.19
GMDS-208ENST00000530927 C12orf60Q5U649 245 aa22.48■■□□□ 1.19
GMDS-208ENST00000530927 RILPL2Q969X0 211 aa22.48■■□□□ 1.19
GMDS-208ENST00000530927 CAPN15O75808 1086 aa22.48■■□□□ 1.19
GMDS-208ENST00000530927 MTMR2Q13614 643 aa22.48■■□□□ 1.19
GMDS-208ENST00000530927 FAM227BQ96M60 508 aa22.48■■□□□ 1.19
GMDS-208ENST00000530927 ZFYVE28Q9HCC9 887 aa22.48■■□□□ 1.19
GMDS-208ENST00000530927 LOC285556D6RIA3 1793 aa22.47■■□□□ 1.19
GMDS-208ENST00000530927 GUCY1A2P33402 732 aa22.47■■□□□ 1.19
GMDS-208ENST00000530927 RAB3GAP1Q15042 981 aa22.47■■□□□ 1.19
GMDS-208ENST00000530927 NOM1Q5C9Z4 860 aaKnown RBP22.47■■□□□ 1.19
GMDS-208ENST00000530927 CD99L2Q8TCZ2 262 aa22.47■■□□□ 1.19
GMDS-208ENST00000530927 OSBPL3Q9H4L5 887 aa22.47■■□□□ 1.19
GMDS-208ENST00000530927 CPA4Q9UI42 421 aa22.47■■□□□ 1.19
GMDS-208ENST00000530927 HTTP42858 3142 aa22.47■■□□□ 1.19
GMDS-208ENST00000530927 A0A0D9SFI3 127 aa22.46■■□□□ 1.19
GMDS-208ENST00000530927 FOXP2O15409 715 aa22.46■■□□□ 1.19
GMDS-208ENST00000530927 ABCB5Q2M3G0 1257 aa22.46■■□□□ 1.19
GMDS-208ENST00000530927 ADGRA2Q96PE1 1338 aa22.45■■□□□ 1.19
GMDS-208ENST00000530927 TLR2O60603 784 aa22.45■■□□□ 1.18
GMDS-208ENST00000530927 APPP05067 770 aa22.45■■□□□ 1.18
GMDS-208ENST00000530927 LRRFIP1Q32MZ4 808 aaKnown RBP22.45■■□□□ 1.18
GMDS-208ENST00000530927 FASTKD5Q7L8L6 764 aaKnown RBP22.45■■□□□ 1.18
GMDS-208ENST00000530927 SKAP1Q86WV1 359 aa22.45■■□□□ 1.18
GMDS-208ENST00000530927 CLEC10AQ8IUN9 316 aa22.45■■□□□ 1.18
GMDS-208ENST00000530927 WDR18Q9BV38 432 aa22.45■■□□□ 1.18
GMDS-208ENST00000530927 MYH8P13535 1937 aa22.44■■□□□ 1.18
GMDS-208ENST00000530927 MINDY4BA8MYZ0 360 aa22.44■■□□□ 1.18
GMDS-208ENST00000530927 MPHOSPH10O00566 681 aaKnown RBP22.44■■□□□ 1.18
GMDS-208ENST00000530927 NEFLP07196 543 aa22.44■■□□□ 1.18
GMDS-208ENST00000530927 AKR1B1P15121 316 aa22.44■■□□□ 1.18
GMDS-208ENST00000530927 CDK8P49336 464 aa22.44■■□□□ 1.18
GMDS-208ENST00000530927 SEPT2Q15019 361 aa22.44■■□□□ 1.18
GMDS-208ENST00000530927 ZYXQ15942 572 aaKnown RBP22.44■■□□□ 1.18
GMDS-208ENST00000530927 VPS53Q5VIR6 699 aa22.44■■□□□ 1.18
GMDS-208ENST00000530927 CTU1Q7Z7A3 348 aaKnown RBP22.44■■□□□ 1.18
GMDS-208ENST00000530927 ACER1Q8TDN7 264 aa22.44■■□□□ 1.18
GMDS-208ENST00000530927 ARHGAP39Q9C0H5 1083 aa22.44■■□□□ 1.18
GMDS-208ENST00000530927 AS3MTQ9HBK9 375 aa22.44■■□□□ 1.18
GMDS-208ENST00000530927 ZCCHC17Q9NP64 241 aaKnown RBP22.44■■□□□ 1.18
GMDS-208ENST00000530927 BACE1P56817 501 aa22.43■■□□□ 1.18
GMDS-208ENST00000530927 SP3Q02447 781 aa22.43■■□□□ 1.18
GMDS-208ENST00000530927 NMIQ13287 307 aaPredicted RBP22.43■■□□□ 1.18
GMDS-208ENST00000530927 C16orf86Q6ZW13 317 aa22.43■■□□□ 1.18
GMDS-208ENST00000530927 DDRGK1Q96HY6 314 aa22.43■■□□□ 1.18
GMDS-208ENST00000530927 ABHD8Q96I13 439 aa22.43■■□□□ 1.18
GMDS-208ENST00000530927 AGTPBP1Q9UPW5 1226 aa22.43■■□□□ 1.18
GMDS-208ENST00000530927 PATL2C9JE40 543 aaKnown RBP22.42■■□□□ 1.18
GMDS-208ENST00000530927 GSPT1P15170 499 aaKnown RBP22.42■■□□□ 1.18
GMDS-208ENST00000530927 TDO2P48775 406 aa22.42■■□□□ 1.18
GMDS-208ENST00000530927 SH3D19Q5HYK7 790 aa22.42■■□□□ 1.18
GMDS-208ENST00000530927 IFFO2Q5TF58 517 aa22.42■■□□□ 1.18
GMDS-208ENST00000530927 C17orf99Q6UX52 265 aa22.42■■□□□ 1.18
GMDS-208ENST00000530927 ZNF589Q86UQ0 364 aaPredicted RBP22.42■■□□□ 1.18
GMDS-208ENST00000530927 IFNL3Q8IZI9 196 aa22.42■■□□□ 1.18
GMDS-208ENST00000530927 ARPP21Q9UBL0 812 aaPredicted RBP22.42■■□□□ 1.18
GMDS-208ENST00000530927 CENPFP49454 3210 aa22.42■■□□□ 1.18
GMDS-208ENST00000530927 SBK1Q52WX2 424 aa22.41■■□□□ 1.18
GMDS-208ENST00000530927 AMOTL1Q8IY63 956 aa22.41■■□□□ 1.18
GMDS-208ENST00000530927 TBC1D2Q9BYX2 928 aa22.41■■□□□ 1.18
GMDS-208ENST00000530927 EMILIN3Q9NT22 766 aa22.41■■□□□ 1.18
GMDS-208ENST00000530927 SWAP70Q9UH65 585 aa22.41■■□□□ 1.18
GMDS-208ENST00000530927 USP17L10C9JJH3 530 aa22.4■■□□□ 1.18
GMDS-208ENST00000530927 GNAT2P19087 354 aa22.4■■□□□ 1.18
GMDS-208ENST00000530927 CTGFP29279 349 aa22.4■■□□□ 1.18
GMDS-208ENST00000530927 GIMAP6Q6P9H5 292 aa22.4■■□□□ 1.18
GMDS-208ENST00000530927 PROCA1Q8NCQ7 364 aaPredicted RBP22.4■■□□□ 1.18
GMDS-208ENST00000530927 PARK7Q99497 189 aaKnown RBP22.4■■□□□ 1.18
GMDS-208ENST00000530927 CABP5Q9NP86 173 aa22.4■■□□□ 1.18
GMDS-208ENST00000530927 GINM1Q9NU53 330 aa22.4■■□□□ 1.18
GMDS-208ENST00000530927 TRIM17Q9Y577 477 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms