RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 SULF2Q8IWU5 870 aa7.56□□□□□ -1.2
AMBRA1-209ENST00000529963 AGGF1Q8N302 714 aaeCLIP7.56□□□□□ -1.2
AMBRA1-209ENST00000529963 GRIN3AQ8TCU5 1115 aa7.56□□□□□ -1.2
AMBRA1-209ENST00000529963 NRSN2Q9GZP1 204 aa7.56□□□□□ -1.2
AMBRA1-209ENST00000529963 C19orf44Q9H6X5 657 aa7.56□□□□□ -1.2
AMBRA1-209ENST00000529963 CBX8Q9HC52 389 aa7.56□□□□□ -1.2
AMBRA1-209ENST00000529963 SRA1Q9HD15 236 aaKnown RBP7.56□□□□□ -1.2
AMBRA1-209ENST00000529963 COPRSQ9NQ92 184 aa7.56□□□□□ -1.2
AMBRA1-209ENST00000529963 E9PCH4 1651 aa7.55□□□□□ -1.2
AMBRA1-209ENST00000529963 BMP6P22004 513 aa7.55□□□□□ -1.2
AMBRA1-209ENST00000529963 RBM6P78332 1123 aaKnown RBP7.55□□□□□ -1.2
AMBRA1-209ENST00000529963 FANCCQ00597 558 aa7.55□□□□□ -1.2
AMBRA1-209ENST00000529963 PCNX4Q63HM2 1172 aa7.55□□□□□ -1.2
AMBRA1-209ENST00000529963 ACAD11Q709F0 780 aa7.55□□□□□ -1.2
AMBRA1-209ENST00000529963 SV2BQ7L1I2 683 aa7.55□□□□□ -1.2
AMBRA1-209ENST00000529963 USP21Q9UK80 565 aa7.55□□□□□ -1.2
AMBRA1-209ENST00000529963 TLR6Q9Y2C9 796 aa7.55□□□□□ -1.2
AMBRA1-209ENST00000529963 TRPM2O94759 1503 aa7.55□□□□□ -1.2
AMBRA1-209ENST00000529963 LOC100289279A0A1B0GTE1 492 aa7.54□□□□□ -1.2
AMBRA1-209ENST00000529963 KRBA1A5PL33 1030 aa7.54□□□□□ -1.2
AMBRA1-209ENST00000529963 TTBK2Q6IQ55 1244 aa7.54□□□□□ -1.2
AMBRA1-209ENST00000529963 DDX54Q8TDD1 881 aaKnown RBP7.54□□□□□ -1.2
AMBRA1-209ENST00000529963 KCNB2Q92953 911 aa7.54□□□□□ -1.2
AMBRA1-209ENST00000529963 DCAF5Q96JK2 942 aa7.54□□□□□ -1.2
AMBRA1-209ENST00000529963 CORO1BQ9BR76 489 aa7.54□□□□□ -1.2
AMBRA1-209ENST00000529963 GGT7Q9UJ14 662 aa7.54□□□□□ -1.2
AMBRA1-209ENST00000529963 SETBP1Q9Y6X0 1596 aa7.54□□□□□ -1.2
AMBRA1-209ENST00000529963 COL16A1Q07092 1604 aaPredicted RBP7.54□□□□□ -1.2
AMBRA1-209ENST00000529963 SHPRHQ149N8 1683 aa7.54□□□□□ -1.2
AMBRA1-209ENST00000529963 CYP11A1P05108 521 aa7.53□□□□□ -1.2
AMBRA1-209ENST00000529963 NME2P22392 152 aa7.53□□□□□ -1.2
AMBRA1-209ENST00000529963 ARNTP27540 789 aa7.53□□□□□ -1.2
AMBRA1-209ENST00000529963 ZNF76P36508 570 aa7.53□□□□□ -1.2
AMBRA1-209ENST00000529963 GSK3AP49840 483 aa7.53□□□□□ -1.2
AMBRA1-209ENST00000529963 MAP1SQ66K74 1059 aaPredicted RBP7.53□□□□□ -1.2
AMBRA1-209ENST00000529963 IGF2-ASQ6U949 168 aa7.53□□□□□ -1.2
AMBRA1-209ENST00000529963 ANKRD24Q8TF21 1146 aa7.53□□□□□ -1.2
AMBRA1-209ENST00000529963 WDR89Q96FK6 387 aaPredicted RBP7.53□□□□□ -1.2
AMBRA1-209ENST00000529963 LRP5O75197 1615 aa7.53□□□□□ -1.2
AMBRA1-209ENST00000529963 LRP6O75581 1613 aa7.53□□□□□ -1.2
AMBRA1-209ENST00000529963 DCCP43146 1447 aa7.53□□□□□ -1.2
AMBRA1-209ENST00000529963 MINDY4BA8MYZ0 360 aa7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 RNF225M0QZC1 329 aaPredicted RBP7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 SCAMP3O14828 347 aaKnown RBP7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 APBA3O96018 575 aa7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 GSTP1P09211 210 aaKnown RBP7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 LIG3P49916 1009 aa7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 HDLBPQ00341 1268 aaKnown RBP7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 AP3B2Q13367 1082 aa7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 PDE3AQ14432 1141 aa7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 KIAA1211Q6ZU35 1233 aa7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 PDZD3Q86UT5 571 aa7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 NOC4LQ9BVI4 516 aaKnown RBP7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 CCDC86Q9H6F5 360 aaKnown RBP7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 KBTBD4Q9NVX7 518 aa7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 PCDHB5Q9Y5E4 795 aa7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 AHDC1Q5TGY3 1603 aaPredicted RBP7.52□□□□□ -1.2
AMBRA1-209ENST00000529963 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.52□□□□□ -1.21
AMBRA1-209ENST00000529963 RGS12O14924 1447 aa7.52□□□□□ -1.21
AMBRA1-209ENST00000529963 PTPRUQ92729 1446 aa7.52□□□□□ -1.21
AMBRA1-209ENST00000529963 LIG1P18858 919 aa7.52□□□□□ -1.21
AMBRA1-209ENST00000529963 CHRNA4P43681 627 aa7.52□□□□□ -1.21
AMBRA1-209ENST00000529963 RASSF7Q02833 373 aa7.52□□□□□ -1.21
AMBRA1-209ENST00000529963 ZNF394Q53GI3 561 aa7.52□□□□□ -1.21
AMBRA1-209ENST00000529963 BRINP3Q76B58 766 aa7.52□□□□□ -1.21
AMBRA1-209ENST00000529963 PCDHGB7Q9Y5F8 929 aa7.52□□□□□ -1.21
AMBRA1-209ENST00000529963 AFF2P51816 1311 aa7.51□□□□□ -1.21
AMBRA1-209ENST00000529963 GBP2P32456 591 aaPredicted RBP7.51□□□□□ -1.21
AMBRA1-209ENST00000529963 HS2ST1Q7LGA3 356 aa7.51□□□□□ -1.21
AMBRA1-209ENST00000529963 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.51□□□□□ -1.21
AMBRA1-209ENST00000529963 RNF34Q969K3 372 aa7.51□□□□□ -1.21
AMBRA1-209ENST00000529963 LENG1Q96BZ8 264 aaPredicted RBP7.51□□□□□ -1.21
AMBRA1-209ENST00000529963 RUSC1Q9BVN2 902 aa7.51□□□□□ -1.21
AMBRA1-209ENST00000529963 MRPL18Q9H0U6 180 aaKnown RBP7.51□□□□□ -1.21
AMBRA1-209ENST00000529963 F8W735 103 aaPredicted RBP7.5□□□□□ -1.21
AMBRA1-209ENST00000529963 TFE3P19532 575 aaPredicted RBP7.5□□□□□ -1.21
AMBRA1-209ENST00000529963 IREB2P48200 963 aaKnown RBP7.5□□□□□ -1.21
AMBRA1-209ENST00000529963 FAM160A1Q05DH4 1040 aa7.5□□□□□ -1.21
AMBRA1-209ENST00000529963 PTPN11Q06124 597 aaPredicted RBP7.5□□□□□ -1.21
AMBRA1-209ENST00000529963 ZNF252P-AS1Q0IIN9 211 aa7.5□□□□□ -1.21
AMBRA1-209ENST00000529963 KCNMA1Q12791 1236 aa7.5□□□□□ -1.21
AMBRA1-209ENST00000529963 SEPT6Q14141 434 aa7.5□□□□□ -1.21
AMBRA1-209ENST00000529963 LLGL2Q6P1M3 1020 aa7.5□□□□□ -1.21
AMBRA1-209ENST00000529963 CD163Q86VB7 1156 aa7.5□□□□□ -1.21
AMBRA1-209ENST00000529963 SPHKAPQ2M3C7 1700 aa7.5□□□□□ -1.21
AMBRA1-209ENST00000529963 ASXL1Q8IXJ9 1541 aa7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 NRXN3Q9Y4C0 1643 aa7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 C1QTNF9BB2RNN3 333 aa7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 ZNF862O60290 1169 aa7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 TCF3P15923 654 aa7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 NOS3P29474 1203 aa7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 MBTPS1Q14703 1052 aa7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 ERMP1Q7Z2K6 904 aa7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 METTL16Q86W50 562 aaKnown RBP7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 RELL1Q8IUW5 271 aa7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 PHC3Q8NDX5 983 aa7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 GPBAR1Q8TDU6 330 aa7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 DCAF11Q8TEB1 546 aa7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 EMILIN2Q9BXX0 1053 aa7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 SAMM50Q9Y512 469 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms