RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 DOCK1Q14185 1865 aa16.12■□□□□ 0.17
SMCO4-205ENST00000529714 CTNND1O60716 968 aaKnown RBP16.12■□□□□ 0.17
SMCO4-205ENST00000529714 PRDM1O75626 825 aa16.12■□□□□ 0.17
SMCO4-205ENST00000529714 SLURP2P0DP57 97 aa16.12■□□□□ 0.17
SMCO4-205ENST00000529714 CAP2P40123 477 aa16.12■□□□□ 0.17
SMCO4-205ENST00000529714 ARMC9Q7Z3E5 817 aa16.12■□□□□ 0.17
SMCO4-205ENST00000529714 STK11IPQ8N1F8 1099 aa16.12■□□□□ 0.17
SMCO4-205ENST00000529714 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.12■□□□□ 0.17
SMCO4-205ENST00000529714 INCENPQ9NQS7 918 aa16.12■□□□□ 0.17
SMCO4-205ENST00000529714 TOMM22Q9NS69 142 aa16.12■□□□□ 0.17
SMCO4-205ENST00000529714 OTOFQ9HC10 1997 aa16.12■□□□□ 0.17
SMCO4-205ENST00000529714 ATAD5Q96QE3 1844 aa16.12■□□□□ 0.17
SMCO4-205ENST00000529714 B4E1Z4 1266 aa16.11■□□□□ 0.17
SMCO4-205ENST00000529714 RANBP6O60518 1105 aaKnown RBP16.11■□□□□ 0.17
SMCO4-205ENST00000529714 CELF2O95319 508 aaKnown RBP16.11■□□□□ 0.17
SMCO4-205ENST00000529714 ASNSP08243 561 aa16.11■□□□□ 0.17
SMCO4-205ENST00000529714 ABCB5Q2M3G0 1257 aa16.11■□□□□ 0.17
SMCO4-205ENST00000529714 ADCK5Q3MIX3 580 aa16.11■□□□□ 0.17
SMCO4-205ENST00000529714 RRP12Q5JTH9 1297 aaKnown RBP16.11■□□□□ 0.17
SMCO4-205ENST00000529714 NOL9Q5SY16 702 aaKnown RBP16.11■□□□□ 0.17
SMCO4-205ENST00000529714 TMEM179Q6ZVK1 233 aa16.11■□□□□ 0.17
SMCO4-205ENST00000529714 MB21D2Q8IYB1 491 aaPredicted RBP16.11■□□□□ 0.17
SMCO4-205ENST00000529714 IL27Q8NEV9 243 aa16.11■□□□□ 0.17
SMCO4-205ENST00000529714 NEDD1Q8NHV4 660 aa16.11■□□□□ 0.17
SMCO4-205ENST00000529714 JAKMIP1Q96N16 626 aaKnown RBP16.11■□□□□ 0.17
SMCO4-205ENST00000529714 WRNIP1Q96S55 665 aa16.11■□□□□ 0.17
SMCO4-205ENST00000529714 MTA3Q9BTC8 594 aa16.11■□□□□ 0.17
SMCO4-205ENST00000529714 GBA2Q9HCG7 927 aaPredicted RBP16.11■□□□□ 0.17
SMCO4-205ENST00000529714 WDR19Q8NEZ3 1342 aa16.11■□□□□ 0.17
SMCO4-205ENST00000529714 TSPY2A6NKD2 308 aa16.1■□□□□ 0.17
SMCO4-205ENST00000529714 KDM4AO75164 1064 aa16.1■□□□□ 0.17
SMCO4-205ENST00000529714 TSPY3P0CV98 308 aa16.1■□□□□ 0.17
SMCO4-205ENST00000529714 TSPY8P0CW00 308 aa16.1■□□□□ 0.17
SMCO4-205ENST00000529714 MCM5P33992 734 aa16.1■□□□□ 0.17
SMCO4-205ENST00000529714 MAP3K9P80192 1104 aa16.1■□□□□ 0.17
SMCO4-205ENST00000529714 TFAP4Q01664 338 aa16.1■□□□□ 0.17
SMCO4-205ENST00000529714 FMR1Q06787 632 aaKnown RBP eCLIP16.1■□□□□ 0.17
SMCO4-205ENST00000529714 TTLL12Q14166 644 aaPredicted RBP16.1■□□□□ 0.17
SMCO4-205ENST00000529714 RRP1BQ14684 758 aaKnown RBP16.1■□□□□ 0.17
SMCO4-205ENST00000529714 CCDC178Q5BJE1 867 aa16.1■□□□□ 0.17
SMCO4-205ENST00000529714 PPP4R3BQ5MIZ7 849 aa16.1■□□□□ 0.17
SMCO4-205ENST00000529714 C2orf69Q8N8R5 385 aa16.1■□□□□ 0.17
SMCO4-205ENST00000529714 ZNF408Q9H9D4 720 aa16.1■□□□□ 0.17
SMCO4-205ENST00000529714 ZSWIM6Q9HCJ5 1215 aa16.1■□□□□ 0.17
SMCO4-205ENST00000529714 CABP5Q9NP86 173 aa16.1■□□□□ 0.17
SMCO4-205ENST00000529714 TCP11L1Q9NUJ3 509 aa16.1■□□□□ 0.17
SMCO4-205ENST00000529714 ZSWIM5Q9P217 1185 aa16.1■□□□□ 0.17
SMCO4-205ENST00000529714 ANGEL1Q9UNK9 670 aaKnown RBP16.1■□□□□ 0.17
SMCO4-205ENST00000529714 IGKV6D-41A0A0C4DH26 115 aa16.09■□□□□ 0.17
SMCO4-205ENST00000529714 AKR1B1P15121 316 aa16.09■□□□□ 0.17
SMCO4-205ENST00000529714 LDLRAD1Q5T700 205 aa16.09■□□□□ 0.17
SMCO4-205ENST00000529714 CST9Q5W186 159 aa16.09■□□□□ 0.17
SMCO4-205ENST00000529714 BLOC1S2Q6QNY1 142 aa16.09■□□□□ 0.17
SMCO4-205ENST00000529714 DHX32Q7L7V1 743 aaKnown RBP16.09■□□□□ 0.17
SMCO4-205ENST00000529714 IQCA1Q86XH1 822 aa16.09■□□□□ 0.17
SMCO4-205ENST00000529714 ANKRD13AQ8IZ07 590 aa16.09■□□□□ 0.17
SMCO4-205ENST00000529714 SCYL3Q8IZE3 742 aa16.09■□□□□ 0.17
SMCO4-205ENST00000529714 KIF2CQ99661 725 aa16.09■□□□□ 0.17
SMCO4-205ENST00000529714 ZBTB21Q9ULJ3 1066 aa16.09■□□□□ 0.17
SMCO4-205ENST00000529714 MPHOSPH10O00566 681 aaKnown RBP16.08■□□□□ 0.16
SMCO4-205ENST00000529714 GDF11O95390 407 aa16.08■□□□□ 0.16
SMCO4-205ENST00000529714 GH2P01242 217 aa16.08■□□□□ 0.16
SMCO4-205ENST00000529714 CASTP20810 708 aaKnown RBP16.08■□□□□ 0.16
SMCO4-205ENST00000529714 INPP5BP32019 993 aa16.08■□□□□ 0.16
SMCO4-205ENST00000529714 EXOSC10Q01780 885 aaKnown RBP16.08■□□□□ 0.16
SMCO4-205ENST00000529714 PRKG1Q13976 671 aa16.08■□□□□ 0.16
SMCO4-205ENST00000529714 FAM47AQ5JRC9 791 aa16.08■□□□□ 0.16
SMCO4-205ENST00000529714 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.08■□□□□ 0.16
SMCO4-205ENST00000529714 RUFY3Q7L099 469 aa16.08■□□□□ 0.16
SMCO4-205ENST00000529714 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMCO4-205ENST00000529714 TBC1D2Q9BYX2 928 aa16.08■□□□□ 0.16
SMCO4-205ENST00000529714 KANSL2Q9H9L4 492 aa16.08■□□□□ 0.16
SMCO4-205ENST00000529714 FZD1Q9UP38 647 aa16.08■□□□□ 0.16
SMCO4-205ENST00000529714 CSADQ9Y600 493 aa16.08■□□□□ 0.16
SMCO4-205ENST00000529714 CYP46A1Q9Y6A2 500 aa16.08■□□□□ 0.16
SMCO4-205ENST00000529714 RPS6KB1P23443 525 aa16.07■□□□□ 0.16
SMCO4-205ENST00000529714 NOVP48745 357 aa16.07■□□□□ 0.16
SMCO4-205ENST00000529714 ANTXR2P58335 489 aa16.07■□□□□ 0.16
SMCO4-205ENST00000529714 JAG1P78504 1218 aa16.07■□□□□ 0.16
SMCO4-205ENST00000529714 VGLL4Q14135 290 aa16.07■□□□□ 0.16
SMCO4-205ENST00000529714 SART3Q15020 963 aaKnown RBP16.07■□□□□ 0.16
SMCO4-205ENST00000529714 RABEP1Q15276 862 aa16.07■□□□□ 0.16
SMCO4-205ENST00000529714 CYB5R4Q7L1T6 521 aa16.07■□□□□ 0.16
SMCO4-205ENST00000529714 FBXL16Q8N461 479 aa16.07■□□□□ 0.16
SMCO4-205ENST00000529714 NKX2-3Q8TAU0 364 aa16.07■□□□□ 0.16
SMCO4-205ENST00000529714 ZKSCAN4Q969J2 545 aaPredicted RBP16.07■□□□□ 0.16
SMCO4-205ENST00000529714 TMEM87BQ96K49 555 aa16.07■□□□□ 0.16
SMCO4-205ENST00000529714 TTC14Q96N46 770 aa16.07■□□□□ 0.16
SMCO4-205ENST00000529714 UBAC1Q9BSL1 405 aa16.07■□□□□ 0.16
SMCO4-205ENST00000529714 PICK1Q9NRD5 415 aa16.07■□□□□ 0.16
SMCO4-205ENST00000529714 PRC1O43663 620 aa16.06■□□□□ 0.16
SMCO4-205ENST00000529714 GUCY1A2P33402 732 aa16.06■□□□□ 0.16
SMCO4-205ENST00000529714 DGKHQ86XP1 1220 aa16.06■□□□□ 0.16
SMCO4-205ENST00000529714 ANKS1AQ92625 1134 aa16.06■□□□□ 0.16
SMCO4-205ENST00000529714 ZSCAN10Q96SZ4 725 aaPredicted RBP16.06■□□□□ 0.16
SMCO4-205ENST00000529714 IL17RBQ9NRM6 502 aa16.06■□□□□ 0.16
SMCO4-205ENST00000529714 MTMR4Q9NYA4 1195 aa16.06■□□□□ 0.16
SMCO4-205ENST00000529714 SYNPO2Q9UMS6 1093 aa16.06■□□□□ 0.16
SMCO4-205ENST00000529714 SNCAIPQ9Y6H5 919 aa16.06■□□□□ 0.16
SMCO4-205ENST00000529714 ERICH2A1L162 156 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms