RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 TLR3O15455 904 aaKnown RBP7.52□□□□□ -1.21
C11orf88-204ENST00000529661 CST3P01034 146 aaPredicted RBP7.52□□□□□ -1.21
C11orf88-204ENST00000529661 CEACAM5P06731 702 aa7.52□□□□□ -1.21
C11orf88-204ENST00000529661 PLCG1P19174 1290 aa7.52□□□□□ -1.21
C11orf88-204ENST00000529661 EIF4A3P38919 411 aaKnown RBP7.52□□□□□ -1.21
C11orf88-204ENST00000529661 CAP2P40123 477 aa7.52□□□□□ -1.21
C11orf88-204ENST00000529661 OXCT1P55809 520 aa7.52□□□□□ -1.21
C11orf88-204ENST00000529661 TP53INP2Q8IXH6 220 aa7.52□□□□□ -1.21
C11orf88-204ENST00000529661 MFSD2AQ8NA29 543 aa7.52□□□□□ -1.21
C11orf88-204ENST00000529661 FBXO27Q8NI29 283 aa7.52□□□□□ -1.21
C11orf88-204ENST00000529661 TMEM87BQ96K49 555 aa7.52□□□□□ -1.21
C11orf88-204ENST00000529661 GNAT3A8MTJ3 354 aa7.51□□□□□ -1.21
C11orf88-204ENST00000529661 GRIN3BO60391 1043 aa7.51□□□□□ -1.21
C11orf88-204ENST00000529661 LDLRAD1Q5T700 205 aa7.51□□□□□ -1.21
C11orf88-204ENST00000529661 LETMD1Q6P1Q0 360 aa7.51□□□□□ -1.21
C11orf88-204ENST00000529661 FBXL19Q6PCT2 694 aa7.51□□□□□ -1.21
C11orf88-204ENST00000529661 FAM214BQ7L5A3 538 aa7.51□□□□□ -1.21
C11orf88-204ENST00000529661 MRPL41Q8IXM3 137 aaKnown RBP7.51□□□□□ -1.21
C11orf88-204ENST00000529661 SLC5A6Q9Y289 635 aa7.51□□□□□ -1.21
C11orf88-204ENST00000529661 GARTP22102 1010 aa7.5□□□□□ -1.21
C11orf88-204ENST00000529661 ZNF76P36508 570 aa7.5□□□□□ -1.21
C11orf88-204ENST00000529661 BNIP3Q12983 259 aa7.5□□□□□ -1.21
C11orf88-204ENST00000529661 IFI16Q16666 785 aaKnown RBP7.5□□□□□ -1.21
C11orf88-204ENST00000529661 SLC6A19Q695T7 634 aa7.5□□□□□ -1.21
C11orf88-204ENST00000529661 ZNF574Q6ZN55 896 aaPredicted RBP7.5□□□□□ -1.21
C11orf88-204ENST00000529661 FAM196AQ6ZSG2 479 aa7.5□□□□□ -1.21
C11orf88-204ENST00000529661 REC114Q7Z4M0 266 aa7.5□□□□□ -1.21
C11orf88-204ENST00000529661 RIN3Q8TB24 985 aa7.5□□□□□ -1.21
C11orf88-204ENST00000529661 ZNF296Q8WUU4 475 aaPredicted RBP7.5□□□□□ -1.21
C11orf88-204ENST00000529661 BCL7CQ8WUZ0 217 aaPredicted RBP7.5□□□□□ -1.21
C11orf88-204ENST00000529661 ACSF2Q96CM8 615 aaPredicted RBP7.5□□□□□ -1.21
C11orf88-204ENST00000529661 FBXL18Q96ME1 805 aa7.5□□□□□ -1.21
C11orf88-204ENST00000529661 MKNK2Q9HBH9 465 aa7.5□□□□□ -1.21
C11orf88-204ENST00000529661 ADAM30Q9UKF2 790 aa7.5□□□□□ -1.21
C11orf88-204ENST00000529661 SUPT16HQ9Y5B9 1047 aaKnown RBP7.5□□□□□ -1.21
C11orf88-204ENST00000529661 IGF2BP3O00425 579 aaKnown RBP eCLIP7.49□□□□□ -1.21
C11orf88-204ENST00000529661 MPP2Q14168 576 aa7.49□□□□□ -1.21
C11orf88-204ENST00000529661 CWF19L2Q2TBE0 894 aaKnown RBP7.49□□□□□ -1.21
C11orf88-204ENST00000529661 MCTP1Q6DN14 999 aa7.49□□□□□ -1.21
C11orf88-204ENST00000529661 NFXL1Q6ZNB6 911 aa7.49□□□□□ -1.21
C11orf88-204ENST00000529661 MCATQ8IVS2 390 aaKnown RBP7.49□□□□□ -1.21
C11orf88-204ENST00000529661 STK11IPQ8N1F8 1099 aa7.49□□□□□ -1.21
C11orf88-204ENST00000529661 PLAGL2Q9UPG8 496 aa7.49□□□□□ -1.21
C11orf88-204ENST00000529661 MAPK8IP1Q9UQF2 711 aa7.49□□□□□ -1.21
C11orf88-204ENST00000529661 POLR3KQ9Y2Y1 108 aaPredicted RBP7.49□□□□□ -1.21
C11orf88-204ENST00000529661 TMEM265A0A087WTH1 108 aa7.48□□□□□ -1.21
C11orf88-204ENST00000529661 FAM155AB1AL88 458 aaPredicted RBP7.48□□□□□ -1.21
C11orf88-204ENST00000529661 CD96P40200 585 aa7.48□□□□□ -1.21
C11orf88-204ENST00000529661 AOC3Q16853 763 aa7.48□□□□□ -1.21
C11orf88-204ENST00000529661 SFRP5Q5T4F7 317 aa7.48□□□□□ -1.21
C11orf88-204ENST00000529661 SPRED2Q7Z698 418 aa7.48□□□□□ -1.21
C11orf88-204ENST00000529661 CDH24Q86UP0 819 aa7.48□□□□□ -1.21
C11orf88-204ENST00000529661 ABI1Q8IZP0 508 aa7.48□□□□□ -1.21
C11orf88-204ENST00000529661 FAM13CQ8NE31 585 aa7.48□□□□□ -1.21
C11orf88-204ENST00000529661 MISP3Q96FF7 219 aa7.48□□□□□ -1.21
C11orf88-204ENST00000529661 HRASLS5Q96KN8 279 aa7.48□□□□□ -1.21
C11orf88-204ENST00000529661 PAK6Q9NQU5 681 aaPredicted RBP7.48□□□□□ -1.21
C11orf88-204ENST00000529661 REV1Q9UBZ9 1251 aa7.48□□□□□ -1.21
C11orf88-204ENST00000529661 KLHL3Q9UH77 587 aa7.48□□□□□ -1.21
C11orf88-204ENST00000529661 ADAMTS1Q9UHI8 967 aa7.48□□□□□ -1.21
C11orf88-204ENST00000529661 CNTNAP4Q9C0A0 1308 aa7.48□□□□□ -1.21
C11orf88-204ENST00000529661 UPK3BL1B0FP48 263 aa7.47□□□□□ -1.21
C11orf88-204ENST00000529661 UPK3BL2E5RIL1 263 aa7.47□□□□□ -1.21
C11orf88-204ENST00000529661 HTR3BO95264 441 aa7.47□□□□□ -1.21
C11orf88-204ENST00000529661 IRAK1P51617 712 aa7.47□□□□□ -1.21
C11orf88-204ENST00000529661 YARSP54577 528 aaKnown RBP7.47□□□□□ -1.21
C11orf88-204ENST00000529661 FANCCQ00597 558 aa7.47□□□□□ -1.21
C11orf88-204ENST00000529661 PRKCQQ04759 706 aa7.47□□□□□ -1.21
C11orf88-204ENST00000529661 ZNF746Q6NUN9 644 aaPredicted RBP7.47□□□□□ -1.21
C11orf88-204ENST00000529661 KCNQ5Q9NR82 932 aa7.47□□□□□ -1.21
C11orf88-204ENST00000529661 UBP1Q9NZI7 540 aa7.47□□□□□ -1.21
C11orf88-204ENST00000529661 PRR33A8MZF0 331 aa7.46□□□□□ -1.22
C11orf88-204ENST00000529661 GREM1O60565 184 aa7.46□□□□□ -1.22
C11orf88-204ENST00000529661 CBX7O95931 251 aa7.46□□□□□ -1.22
C11orf88-204ENST00000529661 RECKO95980 971 aa7.46□□□□□ -1.22
C11orf88-204ENST00000529661 CRKP46108 304 aa7.46□□□□□ -1.22
C11orf88-204ENST00000529661 NKPD1Q17RQ9 610 aa7.46□□□□□ -1.22
C11orf88-204ENST00000529661 SEZ6Q53EL9 994 aa7.46□□□□□ -1.22
C11orf88-204ENST00000529661 SPACA3Q8IXA5 215 aa7.46□□□□□ -1.22
C11orf88-204ENST00000529661 AGBL5Q8NDL9 886 aa7.46□□□□□ -1.22
C11orf88-204ENST00000529661 KRTAP9-2Q9BYQ4 174 aa7.46□□□□□ -1.22
C11orf88-204ENST00000529661 BRMS1Q9HCU9 246 aa7.46□□□□□ -1.22
C11orf88-204ENST00000529661 VAV3Q9UKW4 847 aa7.46□□□□□ -1.22
C11orf88-204ENST00000529661 PCDHGB7Q9Y5F8 929 aa7.46□□□□□ -1.22
C11orf88-204ENST00000529661 RBAK-RBAKDNI3L0D1 243 aa7.45□□□□□ -1.22
C11orf88-204ENST00000529661 CYP7A1P22680 504 aa7.45□□□□□ -1.22
C11orf88-204ENST00000529661 APOBRQ0VD83 1088 aa7.45□□□□□ -1.22
C11orf88-204ENST00000529661 PLCL1Q15111 1095 aa7.45□□□□□ -1.22
C11orf88-204ENST00000529661 TMEM201Q5SNT2 666 aa7.45□□□□□ -1.22
C11orf88-204ENST00000529661 CDKAL1Q5VV42 579 aa7.45□□□□□ -1.22
C11orf88-204ENST00000529661 USP48Q86UV5 1035 aa7.45□□□□□ -1.22
C11orf88-204ENST00000529661 MFSD4AQ8N468 514 aa7.45□□□□□ -1.22
C11orf88-204ENST00000529661 SPON2Q9BUD6 331 aa7.45□□□□□ -1.22
C11orf88-204ENST00000529661 TNKS2Q9H2K2 1166 aa7.45□□□□□ -1.22
C11orf88-204ENST00000529661 METTL5Q9NRN9 209 aaKnown RBP7.45□□□□□ -1.22
C11orf88-204ENST00000529661 PRR36Q9H6K5 1346 aa7.45□□□□□ -1.22
C11orf88-204ENST00000529661 COL17A1Q9UMD9 1497 aaPredicted RBP7.44□□□□□ -1.22
C11orf88-204ENST00000529661 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.44□□□□□ -1.22
C11orf88-204ENST00000529661 CD8BP10966 210 aa7.44□□□□□ -1.22
C11orf88-204ENST00000529661 ETV3P41162 512 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms