RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 CAPN10Q9HC96 672 aa7.64□□□□□ -1.19
CTR9-204ENST00000529355 REV1Q9UBZ9 1251 aa7.64□□□□□ -1.19
CTR9-204ENST00000529355 PPT2Q9UMR5 302 aa7.64□□□□□ -1.19
CTR9-204ENST00000529355 NFIAQ12857 509 aa7.63□□□□□ -1.19
CTR9-204ENST00000529355 CWF19L2Q2TBE0 894 aaKnown RBP7.63□□□□□ -1.19
CTR9-204ENST00000529355 RNF43Q68DV7 783 aa7.63□□□□□ -1.19
CTR9-204ENST00000529355 CCDC81Q6ZN84 652 aa7.63□□□□□ -1.19
CTR9-204ENST00000529355 GPRASP2Q96D09 838 aa7.63□□□□□ -1.19
CTR9-204ENST00000529355 TINF2Q9BSI4 451 aa7.63□□□□□ -1.19
CTR9-204ENST00000529355 KRTAP4-9Q9BYQ8 210 aa7.63□□□□□ -1.19
CTR9-204ENST00000529355 EFR3BQ9Y2G0 817 aa7.63□□□□□ -1.19
CTR9-204ENST00000529355 INPP5FQ9Y2H2 1132 aa7.63□□□□□ -1.19
CTR9-204ENST00000529355 U3KQE9 123 aa7.63□□□□□ -1.19
CTR9-204ENST00000529355 ROBO2Q9HCK4 1378 aa7.62□□□□□ -1.19
CTR9-204ENST00000529355 PRR36Q9H6K5 1346 aa7.62□□□□□ -1.19
CTR9-204ENST00000529355 TXKP42681 527 aa7.62□□□□□ -1.19
CTR9-204ENST00000529355 GJA8P48165 433 aa7.62□□□□□ -1.19
CTR9-204ENST00000529355 HNRNPUQ00839 825 aaKnown RBP eCLIP7.62□□□□□ -1.19
CTR9-204ENST00000529355 MAP7Q14244 749 aa7.62□□□□□ -1.19
CTR9-204ENST00000529355 PRAMEF13Q5VWM6 474 aa7.62□□□□□ -1.19
CTR9-204ENST00000529355 CDC37L1Q7L3B6 337 aa7.62□□□□□ -1.19
CTR9-204ENST00000529355 ARMCX6Q7L4S7 300 aa7.62□□□□□ -1.19
CTR9-204ENST00000529355 HID1Q8IV36 788 aa7.62□□□□□ -1.19
CTR9-204ENST00000529355 SHKBP1Q8TBC3 707 aa7.62□□□□□ -1.19
CTR9-204ENST00000529355 TBC1D32Q96NH3 1257 aa7.62□□□□□ -1.19
CTR9-204ENST00000529355 YIPF2Q9BWQ6 316 aa7.62□□□□□ -1.19
CTR9-204ENST00000529355 KLHL3Q9UH77 587 aa7.62□□□□□ -1.19
CTR9-204ENST00000529355 WDR64B1ANS9 1081 aa7.61□□□□□ -1.19
CTR9-204ENST00000529355 IGLV1-40P01703 118 aa7.61□□□□□ -1.19
CTR9-204ENST00000529355 ZAR1Q86SH2 424 aa7.61□□□□□ -1.19
CTR9-204ENST00000529355 TOP6BLQ8N6T0 577 aa7.61□□□□□ -1.19
CTR9-204ENST00000529355 TMEM87BQ96K49 555 aa7.61□□□□□ -1.19
CTR9-204ENST00000529355 SLITRK5O94991 958 aa7.6□□□□□ -1.19
CTR9-204ENST00000529355 FAM87AP0C7U9 286 aa7.6□□□□□ -1.19
CTR9-204ENST00000529355 LRP8Q14114 963 aa7.6□□□□□ -1.19
CTR9-204ENST00000529355 ZNF765Q7L2R6 523 aa7.6□□□□□ -1.19
CTR9-204ENST00000529355 MCATQ8IVS2 390 aaKnown RBP7.6□□□□□ -1.19
CTR9-204ENST00000529355 RASGRP4Q8TDF6 673 aa7.6□□□□□ -1.19
CTR9-204ENST00000529355 EHMT1Q9H9B1 1298 aa7.6□□□□□ -1.19
CTR9-204ENST00000529355 TACC3Q9Y6A5 838 aa7.6□□□□□ -1.19
CTR9-204ENST00000529355 ARID1BQ8NFD5 2236 aaPredicted RBP7.6□□□□□ -1.19
CTR9-204ENST00000529355 PRR19A6NJB7 356 aa7.59□□□□□ -1.19
CTR9-204ENST00000529355 SLC22A31A6NKX4 558 aa7.59□□□□□ -1.19
CTR9-204ENST00000529355 PAX4O43316 350 aa7.59□□□□□ -1.19
CTR9-204ENST00000529355 NASPP49321 788 aaPredicted RBP7.59□□□□□ -1.19
CTR9-204ENST00000529355 TMEM201Q5SNT2 666 aa7.59□□□□□ -1.19
CTR9-204ENST00000529355 RUFY4Q6ZNE9 571 aa7.59□□□□□ -1.19
CTR9-204ENST00000529355 ZDHHC13Q8IUH4 622 aa7.59□□□□□ -1.19
CTR9-204ENST00000529355 DUSP23Q9BVJ7 150 aa7.59□□□□□ -1.19
CTR9-204ENST00000529355 FOXQ1Q9C009 403 aa7.59□□□□□ -1.19
CTR9-204ENST00000529355 ATE1O95260 518 aa7.58□□□□□ -1.2
CTR9-204ENST00000529355 EOMESO95936 686 aa7.58□□□□□ -1.2
CTR9-204ENST00000529355 CST3P01034 146 aaPredicted RBP7.58□□□□□ -1.2
CTR9-204ENST00000529355 POLR2BP30876 1174 aaKnown RBP7.58□□□□□ -1.2
CTR9-204ENST00000529355 PDE4BQ07343 736 aa7.58□□□□□ -1.2
CTR9-204ENST00000529355 OGFOD3Q6PK18 319 aa7.58□□□□□ -1.2
CTR9-204ENST00000529355 FAM214BQ7L5A3 538 aa7.58□□□□□ -1.2
CTR9-204ENST00000529355 MRPL41Q8IXM3 137 aaKnown RBP7.58□□□□□ -1.2
CTR9-204ENST00000529355 FAM13CQ8NE31 585 aa7.58□□□□□ -1.2
CTR9-204ENST00000529355 DBNDD2Q9BQY9 259 aa7.58□□□□□ -1.2
CTR9-204ENST00000529355 PRDM10Q9NQV6 1147 aa7.58□□□□□ -1.2
CTR9-204ENST00000529355 ADAM30Q9UKF2 790 aa7.58□□□□□ -1.2
CTR9-204ENST00000529355 LRIG2O94898 1065 aa7.57□□□□□ -1.2
CTR9-204ENST00000529355 TGFB1P01137 390 aa7.57□□□□□ -1.2
CTR9-204ENST00000529355 ATF4P18848 351 aaPredicted RBP7.57□□□□□ -1.2
CTR9-204ENST00000529355 HOXA10P31260 410 aaPredicted RBP7.57□□□□□ -1.2
CTR9-204ENST00000529355 SOX9P48436 509 aa7.57□□□□□ -1.2
CTR9-204ENST00000529355 ZNF165P49910 485 aa7.57□□□□□ -1.2
CTR9-204ENST00000529355 NAALADL2Q58DX5 795 aa7.57□□□□□ -1.2
CTR9-204ENST00000529355 ARSHQ5FYA8 562 aa7.57□□□□□ -1.2
CTR9-204ENST00000529355 FBXW10Q5XX13 1052 aa7.57□□□□□ -1.2
CTR9-204ENST00000529355 OVOS1Q6IE37 1185 aa7.57□□□□□ -1.2
CTR9-204ENST00000529355 CDH24Q86UP0 819 aa7.57□□□□□ -1.2
CTR9-204ENST00000529355 REXO1Q8N1G1 1221 aaKnown RBP7.57□□□□□ -1.2
CTR9-204ENST00000529355 BAHD1Q8TBE0 780 aaPredicted RBP7.57□□□□□ -1.2
CTR9-204ENST00000529355 PPP1R13LQ8WUF5 828 aa7.57□□□□□ -1.2
CTR9-204ENST00000529355 HEXIM2Q96MH2 286 aaKnown RBP7.57□□□□□ -1.2
CTR9-204ENST00000529355 MIPEPQ99797 713 aa7.57□□□□□ -1.2
CTR9-204ENST00000529355 FAM86C2PA6NEL3 165 aa7.56□□□□□ -1.2
CTR9-204ENST00000529355 CAP2P40123 477 aa7.56□□□□□ -1.2
CTR9-204ENST00000529355 SLC6A19Q695T7 634 aa7.56□□□□□ -1.2
CTR9-204ENST00000529355 MCTP1Q6DN14 999 aa7.56□□□□□ -1.2
CTR9-204ENST00000529355 FAM181AQ8N9Y4 354 aa7.56□□□□□ -1.2
CTR9-204ENST00000529355 KCT2Q8NC54 265 aa7.56□□□□□ -1.2
CTR9-204ENST00000529355 ATG4CQ96DT6 458 aa7.56□□□□□ -1.2
CTR9-204ENST00000529355 KIF2CQ99661 725 aa7.56□□□□□ -1.2
CTR9-204ENST00000529355 KRTAP4-2Q9BYR5 136 aa7.56□□□□□ -1.2
CTR9-204ENST00000529355 MED26O95402 600 aa7.55□□□□□ -1.2
CTR9-204ENST00000529355 DNAJA1P31689 397 aaKnown RBP7.55□□□□□ -1.2
CTR9-204ENST00000529355 FERD3LQ96RJ6 166 aa7.55□□□□□ -1.2
CTR9-204ENST00000529355 ZNRF3Q9ULT6 936 aa7.55□□□□□ -1.2
CTR9-204ENST00000529355 MRVI1Q9Y6F6 885 aa7.55□□□□□ -1.2
CTR9-204ENST00000529355 PRR33A8MZF0 331 aa7.54□□□□□ -1.2
CTR9-204ENST00000529355 ACRP10323 421 aa7.54□□□□□ -1.2
CTR9-204ENST00000529355 LETMD1Q6P1Q0 360 aa7.54□□□□□ -1.2
CTR9-204ENST00000529355 FAM169BQ8N8A8 192 aa7.54□□□□□ -1.2
CTR9-204ENST00000529355 LRRC4CQ9HCJ2 640 aa7.54□□□□□ -1.2
CTR9-204ENST00000529355 DIEXFQ68CQ4 756 aaKnown RBP7.53□□□□□ -1.2
CTR9-204ENST00000529355 LSRQ86X29 649 aaPredicted RBP7.53□□□□□ -1.2
CTR9-204ENST00000529355 MCF2L2Q86YR7 1114 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms