RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 FLT3LGP49771 235 aa13.52□□□□□ -0.25
NR1H3-230ENST00000527949 GPAT2Q6NUI2 795 aa13.52□□□□□ -0.25
NR1H3-230ENST00000527949 NECAB2Q7Z6G3 386 aa13.52□□□□□ -0.25
NR1H3-230ENST00000527949 PROCA1Q8NCQ7 364 aaPredicted RBP13.52□□□□□ -0.25
NR1H3-230ENST00000527949 PAK6Q9NQU5 681 aaPredicted RBP13.52□□□□□ -0.25
NR1H3-230ENST00000527949 PNMA3Q9UL41 463 aa13.52□□□□□ -0.25
NR1H3-230ENST00000527949 ATAD5Q96QE3 1844 aa13.51□□□□□ -0.25
NR1H3-230ENST00000527949 ATP5JP18859 108 aa13.51□□□□□ -0.25
NR1H3-230ENST00000527949 C20orf194Q5TEA3 1177 aa13.51□□□□□ -0.25
NR1H3-230ENST00000527949 TGFBRAP1Q8WUH2 860 aa13.51□□□□□ -0.25
NR1H3-230ENST00000527949 DEFB118Q96PH6 123 aa13.51□□□□□ -0.25
NR1H3-230ENST00000527949 WDR18Q9BV38 432 aa13.51□□□□□ -0.25
NR1H3-230ENST00000527949 CRISPLD2Q9H0B8 497 aa13.51□□□□□ -0.25
NR1H3-230ENST00000527949 EHD4Q9H223 541 aa13.51□□□□□ -0.25
NR1H3-230ENST00000527949 MYH1P12882 1939 aa13.51□□□□□ -0.25
NR1H3-230ENST00000527949 LOC285556D6RIA3 1793 aa13.5□□□□□ -0.25
NR1H3-230ENST00000527949 CEP290O15078 2479 aa13.5□□□□□ -0.25
NR1H3-230ENST00000527949 USP17L5A8MUK1 530 aa13.5□□□□□ -0.25
NR1H3-230ENST00000527949 HLA-DOAP06340 250 aa13.5□□□□□ -0.25
NR1H3-230ENST00000527949 ASNSP08243 561 aa13.5□□□□□ -0.25
NR1H3-230ENST00000527949 SH3D19Q5HYK7 790 aa13.5□□□□□ -0.25
NR1H3-230ENST00000527949 MAGEB6Q8N7X4 407 aa13.5□□□□□ -0.25
NR1H3-230ENST00000527949 RIOK1Q9BRS2 568 aaKnown RBP13.5□□□□□ -0.25
NR1H3-230ENST00000527949 LRRCC1Q9C099 1032 aa13.5□□□□□ -0.25
NR1H3-230ENST00000527949 ANTXR1Q9H6X2 564 aa13.5□□□□□ -0.25
NR1H3-230ENST00000527949 AS3MTQ9HBK9 375 aa13.5□□□□□ -0.25
NR1H3-230ENST00000527949 GABRQQ9UN88 632 aa13.5□□□□□ -0.25
NR1H3-230ENST00000527949 AGTPBP1Q9UPW5 1226 aa13.5□□□□□ -0.25
NR1H3-230ENST00000527949 SZT2Q5T011 3432 aa13.5□□□□□ -0.25
NR1H3-230ENST00000527949 PDE6AP16499 860 aa13.49□□□□□ -0.25
NR1H3-230ENST00000527949 PABPC4Q13310 644 aaKnown RBP eCLIP13.49□□□□□ -0.25
NR1H3-230ENST00000527949 GADL1Q6ZQY3 521 aa13.49□□□□□ -0.25
NR1H3-230ENST00000527949 MAPKAPK5Q8IW41 473 aa13.49□□□□□ -0.25
NR1H3-230ENST00000527949 ZNF280CQ8ND82 737 aa13.49□□□□□ -0.25
NR1H3-230ENST00000527949 DCTPP1Q9H773 170 aa13.49□□□□□ -0.25
NR1H3-230ENST00000527949 DNAJC18Q9H819 358 aa13.49□□□□□ -0.25
NR1H3-230ENST00000527949 STAP2Q9UGK3 403 aa13.49□□□□□ -0.25
NR1H3-230ENST00000527949 DDX60LQ5H9U9 1706 aaKnown RBP13.48□□□□□ -0.25
NR1H3-230ENST00000527949 RANBP2P49792 3224 aaKnown RBP13.48□□□□□ -0.25
NR1H3-230ENST00000527949 ELNP15502 786 aa13.48□□□□□ -0.25
NR1H3-230ENST00000527949 GCLCP48506 637 aaPredicted RBP13.48□□□□□ -0.25
NR1H3-230ENST00000527949 DYNLL1P63167 89 aaKnown RBP13.48□□□□□ -0.25
NR1H3-230ENST00000527949 FAM110CQ1W6H9 321 aa13.48□□□□□ -0.25
NR1H3-230ENST00000527949 TTC6Q86TZ1 520 aa13.48□□□□□ -0.25
NR1H3-230ENST00000527949 HAUS7Q99871 368 aa13.48□□□□□ -0.25
NR1H3-230ENST00000527949 TCRBV5S4A2TA0A5A2 114 aa13.47□□□□□ -0.25
NR1H3-230ENST00000527949 FAM196BA6NMK8 535 aa13.47□□□□□ -0.25
NR1H3-230ENST00000527949 C19orf81C9J6K1 198 aa13.47□□□□□ -0.25
NR1H3-230ENST00000527949 HMGCRP04035 888 aa13.47□□□□□ -0.25
NR1H3-230ENST00000527949 SLURP2P0DP57 97 aa13.47□□□□□ -0.25
NR1H3-230ENST00000527949 RRP1BQ14684 758 aaKnown RBP13.47□□□□□ -0.25
NR1H3-230ENST00000527949 LRIT3Q3SXY7 679 aa13.47□□□□□ -0.25
NR1H3-230ENST00000527949 SLC9C2Q5TAH2 1124 aa13.47□□□□□ -0.25
NR1H3-230ENST00000527949 TATDN1Q6P1N9 297 aa13.47□□□□□ -0.25
NR1H3-230ENST00000527949 CRACR2BQ8N4Y2 399 aaPredicted RBP13.47□□□□□ -0.25
NR1H3-230ENST00000527949 PAWRQ96IZ0 340 aaKnown RBP13.47□□□□□ -0.25
NR1H3-230ENST00000527949 GDF15Q99988 308 aa13.47□□□□□ -0.25
NR1H3-230ENST00000527949 CRNKL1Q9BZJ0 848 aaKnown RBP13.47□□□□□ -0.25
NR1H3-230ENST00000527949 NBPF3Q9H094 633 aa13.47□□□□□ -0.25
NR1H3-230ENST00000527949 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.47□□□□□ -0.25
NR1H3-230ENST00000527949 PAG1Q9NWQ8 432 aa13.47□□□□□ -0.25
NR1H3-230ENST00000527949 SERPINB13Q9UIV8 391 aa13.47□□□□□ -0.25
NR1H3-230ENST00000527949 PALD1Q9ULE6 856 aa13.47□□□□□ -0.25
NR1H3-230ENST00000527949 MYH7P12883 1935 aa13.47□□□□□ -0.25
NR1H3-230ENST00000527949 ZSWIM8A7E2V4 1837 aa13.46□□□□□ -0.25
NR1H3-230ENST00000527949 MAGEB6P1A0A0J9YX57 407 aa13.46□□□□□ -0.25
NR1H3-230ENST00000527949 TRIM75PA6NK02 468 aa13.46□□□□□ -0.25
NR1H3-230ENST00000527949 GOLIM4O00461 696 aa13.46□□□□□ -0.25
NR1H3-230ENST00000527949 USP5P45974 858 aa13.46□□□□□ -0.25
NR1H3-230ENST00000527949 BACE1P56817 501 aa13.46□□□□□ -0.25
NR1H3-230ENST00000527949 SPP2Q13103 211 aa13.46□□□□□ -0.25
NR1H3-230ENST00000527949 MIGA1Q8NAN2 632 aa13.46□□□□□ -0.25
NR1H3-230ENST00000527949 LRCH3Q96II8 777 aa13.46□□□□□ -0.25
NR1H3-230ENST00000527949 TRIM34Q9BYJ4 488 aa13.46□□□□□ -0.25
NR1H3-230ENST00000527949 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.46□□□□□ -0.25
NR1H3-230ENST00000527949 HMX1Q9NP08 348 aaPredicted RBP13.46□□□□□ -0.25
NR1H3-230ENST00000527949 STXBP5LQ9Y2K9 1186 aa13.46□□□□□ -0.25
NR1H3-230ENST00000527949 NDUFB9Q9Y6M9 179 aa13.46□□□□□ -0.25
NR1H3-230ENST00000527949 MGAMO43451 1857 aa13.46□□□□□ -0.26
NR1H3-230ENST00000527949 RPTORQ8N122 1335 aa13.45□□□□□ -0.26
NR1H3-230ENST00000527949 ZNF532Q9HCE3 1301 aa13.45□□□□□ -0.26
NR1H3-230ENST00000527949 APBB1O00213 710 aa13.45□□□□□ -0.26
NR1H3-230ENST00000527949 SOX1O00570 391 aaPredicted RBP13.45□□□□□ -0.26
NR1H3-230ENST00000527949 HOXA7P31268 230 aaPredicted RBP13.45□□□□□ -0.26
NR1H3-230ENST00000527949 ADD2P35612 726 aa13.45□□□□□ -0.26
NR1H3-230ENST00000527949 GABPAQ06546 454 aa13.45□□□□□ -0.26
NR1H3-230ENST00000527949 AAMPQ13685 434 aa13.45□□□□□ -0.26
NR1H3-230ENST00000527949 UBE3CQ15386 1083 aa13.45□□□□□ -0.26
NR1H3-230ENST00000527949 DEFB123Q8N688 67 aa13.45□□□□□ -0.26
NR1H3-230ENST00000527949 ANKRD13CQ8N6S4 541 aa13.45□□□□□ -0.26
NR1H3-230ENST00000527949 DNAJC2Q99543 621 aaKnown RBP13.45□□□□□ -0.26
NR1H3-230ENST00000527949 ZBTB21Q9ULJ3 1066 aa13.45□□□□□ -0.26
NR1H3-230ENST00000527949 NAV1Q8NEY1 1877 aa13.44□□□□□ -0.26
NR1H3-230ENST00000527949 RRP1P56182 461 aaKnown RBP13.44□□□□□ -0.26
NR1H3-230ENST00000527949 ZSCAN25Q6NSZ9 544 aa13.44□□□□□ -0.26
NR1H3-230ENST00000527949 TRMT44Q8IYL2 757 aaKnown RBP13.44□□□□□ -0.26
NR1H3-230ENST00000527949 TDHQ8IZJ6 230 aa13.44□□□□□ -0.26
NR1H3-230ENST00000527949 BOLA2Q9H3K6 86 aa13.44□□□□□ -0.26
NR1H3-230ENST00000527949 ATP8A2Q9NTI2 1148 aa13.44□□□□□ -0.26
NR1H3-230ENST00000527949 ECHDC1Q9NTX5 307 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms