RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CUTAO60888 179 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 PLCD1P51178 756 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 ICA1Q05084 483 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 GRM1Q13255 1194 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 NUP88Q99567 741 aaPredicted RBP17.09■□□□□ 0.33
USP47-207ENST00000527733 CD209Q9NNX6 404 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 SWAP70Q9UH65 585 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 MYCNP04198 464 aaPredicted RBP17.09■□□□□ 0.33
USP47-207ENST00000527733 APOA5Q6Q788 366 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 TMC6Q7Z403 805 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 REXO1Q8N1G1 1221 aaKnown RBP17.09■□□□□ 0.33
USP47-207ENST00000527733 CPLX3Q8WVH0 158 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 PIM2Q9P1W9 311 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 SERPINB13Q9UIV8 391 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 ZBED4O75132 1171 aa17.08■□□□□ 0.33
USP47-207ENST00000527733 CPXCR1Q8N123 301 aa17.08■□□□□ 0.33
USP47-207ENST00000527733 COL5A2P05997 1499 aaPredicted RBP17.08■□□□□ 0.33
USP47-207ENST00000527733 SPA17Q15506 151 aa17.08■□□□□ 0.32
USP47-207ENST00000527733 MYSM1Q5VVJ2 828 aa17.08■□□□□ 0.32
USP47-207ENST00000527733 CMTR1Q8N1G2 835 aaKnown RBP17.08■□□□□ 0.32
USP47-207ENST00000527733 KCNH3Q9ULD8 1083 aa17.08■□□□□ 0.32
USP47-207ENST00000527733 YEATS4O95619 227 aa17.08■□□□□ 0.32
USP47-207ENST00000527733 PODNQ7Z5L7 613 aa17.08■□□□□ 0.32
USP47-207ENST00000527733 VPS36Q86VN1 386 aa17.08■□□□□ 0.32
USP47-207ENST00000527733 ZSCAN12O43309 604 aa17.08■□□□□ 0.32
USP47-207ENST00000527733 CCNT1O60563 726 aaKnown RBP17.08■□□□□ 0.32
USP47-207ENST00000527733 LRRC47Q8N1G4 583 aaKnown RBP17.08■□□□□ 0.32
USP47-207ENST00000527733 CCDC112Q8NEF3 446 aa17.08■□□□□ 0.32
USP47-207ENST00000527733 CLRN2A0PK11 232 aa17.07■□□□□ 0.32
USP47-207ENST00000527733 SCRN1Q12765 414 aa17.07■□□□□ 0.32
USP47-207ENST00000527733 AOPEPQ8N6M6 819 aa17.07■□□□□ 0.32
USP47-207ENST00000527733 CSRNP1Q96S65 589 aa17.07■□□□□ 0.32
USP47-207ENST00000527733 MTMR6Q9Y217 621 aa17.07■□□□□ 0.32
USP47-207ENST00000527733 ABCC12Q96J65 1359 aa17.07■□□□□ 0.32
USP47-207ENST00000527733 UTYO14607 1347 aa17.07■□□□□ 0.32
USP47-207ENST00000527733 PRDX5P30044 214 aa17.07■□□□□ 0.32
USP47-207ENST00000527733 ABCB5Q2M3G0 1257 aa17.07■□□□□ 0.32
USP47-207ENST00000527733 DHX36Q9H2U1 1008 aaKnown RBP17.07■□□□□ 0.32
USP47-207ENST00000527733 UBASH3AP57075 661 aa17.07■□□□□ 0.32
USP47-207ENST00000527733 RFX7Q2KHR2 1363 aa17.07■□□□□ 0.32
USP47-207ENST00000527733 SMCO2A6NFE2 343 aa17.06■□□□□ 0.32
USP47-207ENST00000527733 PRR5LQ6MZQ0 368 aa17.06■□□□□ 0.32
USP47-207ENST00000527733 CTAGE1Q96RT6 745 aa17.06■□□□□ 0.32
USP47-207ENST00000527733 AS3MTQ9HBK9 375 aa17.06■□□□□ 0.32
USP47-207ENST00000527733 CSADQ9Y600 493 aa17.06■□□□□ 0.32
USP47-207ENST00000527733 USH1GQ495M9 461 aa17.06■□□□□ 0.32
USP47-207ENST00000527733 GRIPAP1Q4V328 841 aa17.06■□□□□ 0.32
USP47-207ENST00000527733 PLIN2Q99541 437 aa17.06■□□□□ 0.32
USP47-207ENST00000527733 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
USP47-207ENST00000527733 NTSR2O95665 410 aa17.06■□□□□ 0.32
USP47-207ENST00000527733 POTEJP0CG39 1038 aa17.06■□□□□ 0.32
USP47-207ENST00000527733 SCG2P13521 617 aa17.06■□□□□ 0.32
USP47-207ENST00000527733 ZBTB7AO95365 584 aa17.06■□□□□ 0.32
USP47-207ENST00000527733 SP8Q8IXZ3 490 aa17.06■□□□□ 0.32
USP47-207ENST00000527733 KIF2AO00139 706 aaPredicted RBP17.05■□□□□ 0.32
USP47-207ENST00000527733 USP17L8P0C7I0 530 aa17.05■□□□□ 0.32
USP47-207ENST00000527733 TXKP42681 527 aa17.05■□□□□ 0.32
USP47-207ENST00000527733 CIAPIN1Q6FI81 312 aa17.05■□□□□ 0.32
USP47-207ENST00000527733 NOSTRINQ8IVI9 506 aa17.05■□□□□ 0.32
USP47-207ENST00000527733 SULF1Q8IWU6 871 aa17.05■□□□□ 0.32
USP47-207ENST00000527733 FERMT2Q96AC1 680 aa17.05■□□□□ 0.32
USP47-207ENST00000527733 CFBP00751 764 aa17.05■□□□□ 0.32
USP47-207ENST00000527733 NT5C2P49902 561 aa17.05■□□□□ 0.32
USP47-207ENST00000527733 EAPPQ56P03 285 aaPredicted RBP17.05■□□□□ 0.32
USP47-207ENST00000527733 SLFN13Q68D06 897 aa17.05■□□□□ 0.32
USP47-207ENST00000527733 FBXO18Q8NFZ0 1043 aa17.05■□□□□ 0.32
USP47-207ENST00000527733 FAM84BQ96KN1 310 aaPredicted RBP17.05■□□□□ 0.32
USP47-207ENST00000527733 IBSPP21815 317 aaPredicted RBP17.05■□□□□ 0.32
USP47-207ENST00000527733 TAOK3Q9H2K8 898 aa17.05■□□□□ 0.32
USP47-207ENST00000527733 ZSWIM5Q9P217 1185 aa17.05■□□□□ 0.32
USP47-207ENST00000527733 PXDNQ92626 1479 aa17.04■□□□□ 0.32
USP47-207ENST00000527733 GOLGA8HP0CJ92 632 aa17.04■□□□□ 0.32
USP47-207ENST00000527733 CUL4AQ13619 759 aa17.04■□□□□ 0.32
USP47-207ENST00000527733 INTS5Q6P9B9 1019 aaKnown RBP17.04■□□□□ 0.32
USP47-207ENST00000527733 NSMFQ6X4W1 530 aa17.04■□□□□ 0.32
USP47-207ENST00000527733 SV2BQ7L1I2 683 aa17.04■□□□□ 0.32
USP47-207ENST00000527733 KIFC2Q96AC6 838 aa17.04■□□□□ 0.32
USP47-207ENST00000527733 TDRD12Q587J7 1177 aaKnown RBP17.04■□□□□ 0.32
USP47-207ENST00000527733 CCDC181Q5TID7 509 aa17.04■□□□□ 0.32
USP47-207ENST00000527733 BICD1Q96G01 975 aa17.04■□□□□ 0.32
USP47-207ENST00000527733 CRAMP1Q96RY5 1269 aa17.04■□□□□ 0.32
USP47-207ENST00000527733 RDXP35241 583 aaKnown RBP17.04■□□□□ 0.32
USP47-207ENST00000527733 HAUS3Q68CZ6 603 aa17.04■□□□□ 0.32
USP47-207ENST00000527733 BLIDQ8IZY5 108 aa17.04■□□□□ 0.32
USP47-207ENST00000527733 FAM13AO94988 1023 aa17.04■□□□□ 0.32
USP47-207ENST00000527733 CD2BP2O95400 341 aaKnown RBP17.04■□□□□ 0.32
USP47-207ENST00000527733 HSP90AA4PQ58FG1 418 aa17.04■□□□□ 0.32
USP47-207ENST00000527733 CCDC150Q8NCX0 1101 aa17.04■□□□□ 0.32
USP47-207ENST00000527733 DCPSQ96C86 337 aaKnown RBP17.04■□□□□ 0.32
USP47-207ENST00000527733 PI4KBQ9UBF8 816 aa17.04■□□□□ 0.32
USP47-207ENST00000527733 FRMPD2Q68DX3 1309 aaPredicted RBP17.04■□□□□ 0.32
USP47-207ENST00000527733 BACH1O14867 736 aa17.03■□□□□ 0.32
USP47-207ENST00000527733 TRIM21P19474 475 aaKnown RBP17.03■□□□□ 0.32
USP47-207ENST00000527733 CCT6AP40227 531 aaKnown RBP17.03■□□□□ 0.32
USP47-207ENST00000527733 LIFRP42702 1097 aa17.03■□□□□ 0.32
USP47-207ENST00000527733 SLFNL1Q499Z3 407 aa17.03■□□□□ 0.32
USP47-207ENST00000527733 GPATCH4Q5T3I0 446 aaKnown RBP17.03■□□□□ 0.32
USP47-207ENST00000527733 CYP2D7A0A087X1C5 515 aa17.03■□□□□ 0.32
USP47-207ENST00000527733 ACBD3Q9H3P7 528 aa17.03■□□□□ 0.32
USP47-207ENST00000527733 KANSL2Q9H9L4 492 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms