RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 ALG1LQ6GMV1 187 aa5.27□□□□□ -1.57
CLNS1A-208ENST00000527265 DBX2Q6ZNG2 339 aa5.27□□□□□ -1.57
CLNS1A-208ENST00000527265 FILIP1Q7Z7B0 1213 aa5.27□□□□□ -1.57
CLNS1A-208ENST00000527265 VPS37DQ86XT2 251 aa5.27□□□□□ -1.57
CLNS1A-208ENST00000527265 DNAJC25Q9H1X3 360 aa5.27□□□□□ -1.57
CLNS1A-208ENST00000527265 RAD18Q9NS91 495 aa5.27□□□□□ -1.57
CLNS1A-208ENST00000527265 IFT57Q9NWB7 429 aa5.27□□□□□ -1.57
CLNS1A-208ENST00000527265 SALL4Q9UJQ4 1053 aa5.27□□□□□ -1.57
CLNS1A-208ENST00000527265 CCDC194A0A1B0GVG4 234 aa5.26□□□□□ -1.57
CLNS1A-208ENST00000527265 ZNF503-AS2A6NEH8 195 aa5.26□□□□□ -1.57
CLNS1A-208ENST00000527265 NFKBIEO00221 500 aa5.26□□□□□ -1.57
CLNS1A-208ENST00000527265 ACPPP15309 386 aa5.26□□□□□ -1.57
CLNS1A-208ENST00000527265 AOC3Q16853 763 aa5.26□□□□□ -1.57
CLNS1A-208ENST00000527265 AKAP4Q5JQC9 854 aa5.26□□□□□ -1.57
CLNS1A-208ENST00000527265 RPUSD2Q8IZ73 545 aaKnown RBP5.26□□□□□ -1.57
CLNS1A-208ENST00000527265 C1orf127Q8N9H9 656 aa5.26□□□□□ -1.57
CLNS1A-208ENST00000527265 PMEPA1Q969W9 287 aa5.26□□□□□ -1.57
CLNS1A-208ENST00000527265 CHRDQ9H2X0 955 aa5.26□□□□□ -1.57
CLNS1A-208ENST00000527265 ACSS3Q9H6R3 686 aa5.26□□□□□ -1.57
CLNS1A-208ENST00000527265 ZFYVE28Q9HCC9 887 aa5.26□□□□□ -1.57
CLNS1A-208ENST00000527265 CNTN3Q9P232 1028 aa5.26□□□□□ -1.57
CLNS1A-208ENST00000527265 FAN1Q9Y2M0 1017 aa5.26□□□□□ -1.57
CLNS1A-208ENST00000527265 EREGO14944 169 aa5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 PEX14O75381 377 aa5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 ATF4P18848 351 aaPredicted RBP5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 GJA8P48165 433 aa5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 PTPN12Q05209 780 aaKnown RBP5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 SERINC3Q13530 473 aa5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 CIAPIN1Q6FI81 312 aa5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 VN1R5Q7Z5H4 357 aa5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 AMIGO3Q86WK7 504 aa5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 FAM181AQ8N9Y4 354 aa5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 ASAP3Q8TDY4 903 aa5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 MORC4Q8TE76 937 aa5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 FBF1Q8TES7 1133 aa5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 CCDC74AQ96AQ1 378 aa5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 LIN37Q96GY3 246 aaPredicted RBP5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 IRF2BPLQ9H1B7 796 aa5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 C1GALT1Q9NS00 363 aa5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 FAM105AQ9NUU6 356 aa5.25□□□□□ -1.57
CLNS1A-208ENST00000527265 TMEM265A0A087WTH1 108 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 DNAJC6O75061 913 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 TRPA1O75762 1119 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 CYP11A1P05108 521 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 POLR3DP05423 398 aaPredicted RBP5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 C1QTNF9P0C862 333 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 CD96P40200 585 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 AFMP43652 599 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 HS2ST1Q7LGA3 356 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 CKAP2LQ8IYA6 745 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 EPS8L3Q8TE67 593 aaKnown RBP5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 NXPE3Q969Y0 559 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 RELTQ969Z4 430 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 HHIPQ96QV1 700 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 OSMRQ99650 979 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 CRIM1Q9NZV1 1036 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 AK5Q9Y6K8 562 aa5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.24□□□□□ -1.57
CLNS1A-208ENST00000527265 NPIPB6E9PJ23 425 aa5.23□□□□□ -1.57
CLNS1A-208ENST00000527265 TMEM253P0C7T8 217 aa5.23□□□□□ -1.57
CLNS1A-208ENST00000527265 FAM87AP0C7U9 286 aa5.23□□□□□ -1.57
CLNS1A-208ENST00000527265 ESRRAP11474 423 aaPredicted RBP5.23□□□□□ -1.57
CLNS1A-208ENST00000527265 PAK2Q13177 524 aa5.23□□□□□ -1.57
CLNS1A-208ENST00000527265 PI16Q6UXB8 463 aa5.23□□□□□ -1.57
CLNS1A-208ENST00000527265 FBXO15Q8NCQ5 510 aaPredicted RBP5.23□□□□□ -1.57
CLNS1A-208ENST00000527265 RNPC3Q96LT9 517 aaKnown RBP5.23□□□□□ -1.57
CLNS1A-208ENST00000527265 MKNK2Q9HBH9 465 aa5.23□□□□□ -1.57
CLNS1A-208ENST00000527265 SPC25Q9HBM1 224 aa5.23□□□□□ -1.57
CLNS1A-208ENST00000527265 LGR6Q9HBX8 967 aa5.23□□□□□ -1.57
CLNS1A-208ENST00000527265 BCCIPQ9P287 314 aaKnown RBP eCLIP5.23□□□□□ -1.57
CLNS1A-208ENST00000527265 MAGEC2Q9UBF1 373 aaPredicted RBP5.23□□□□□ -1.57
CLNS1A-208ENST00000527265 GGT7Q9UJ14 662 aa5.23□□□□□ -1.57
CLNS1A-208ENST00000527265 U2SURPO15042 1029 aaKnown RBP5.22□□□□□ -1.57
CLNS1A-208ENST00000527265 S100BP04271 92 aaPredicted RBP5.22□□□□□ -1.57
CLNS1A-208ENST00000527265 GLI1P08151 1106 aa5.22□□□□□ -1.57
CLNS1A-208ENST00000527265 PLEKHG4Q58EX7 1191 aa5.22□□□□□ -1.57
CLNS1A-208ENST00000527265 NBPF6Q5VWK0 638 aa5.22□□□□□ -1.57
CLNS1A-208ENST00000527265 SEZ6L2Q6UXD5 910 aa5.22□□□□□ -1.57
CLNS1A-208ENST00000527265 STAG1Q8WVM7 1258 aa5.22□□□□□ -1.57
CLNS1A-208ENST00000527265 MKL1Q969V6 931 aa5.22□□□□□ -1.57
CLNS1A-208ENST00000527265 GPRASP2Q96D09 838 aa5.22□□□□□ -1.57
CLNS1A-208ENST00000527265 NBPF4Q96M43 638 aa5.22□□□□□ -1.57
CLNS1A-208ENST00000527265 NPHS2Q9NP85 383 aa5.22□□□□□ -1.57
CLNS1A-208ENST00000527265 DDX56Q9NY93 547 aaKnown RBP5.22□□□□□ -1.57
CLNS1A-208ENST00000527265 GABBR1Q9UBS5 961 aa5.22□□□□□ -1.57
CLNS1A-208ENST00000527265 G3BP2Q9UN86 482 aaKnown RBP5.22□□□□□ -1.57
CLNS1A-208ENST00000527265 SPG7Q9UQ90 795 aa5.22□□□□□ -1.57
CLNS1A-208ENST00000527265 DYNC1LI2O43237 492 aaPredicted RBP5.21□□□□□ -1.58
CLNS1A-208ENST00000527265 CEACAM5P06731 702 aa5.21□□□□□ -1.58
CLNS1A-208ENST00000527265 EDN3P14138 238 aa5.21□□□□□ -1.58
CLNS1A-208ENST00000527265 EIF4BP23588 611 aaKnown RBP5.21□□□□□ -1.58
CLNS1A-208ENST00000527265 MAOBP27338 520 aa5.21□□□□□ -1.58
CLNS1A-208ENST00000527265 KCNA10Q16322 511 aa5.21□□□□□ -1.58
CLNS1A-208ENST00000527265 PRR23BQ6ZRT6 265 aa5.21□□□□□ -1.58
CLNS1A-208ENST00000527265 GALNT12Q8IXK2 581 aa5.21□□□□□ -1.58
CLNS1A-208ENST00000527265 DDX54Q8TDD1 881 aaKnown RBP5.21□□□□□ -1.58
CLNS1A-208ENST00000527265 FRMD6Q96NE9 622 aa5.21□□□□□ -1.58
CLNS1A-208ENST00000527265 LATS2Q9NRM7 1088 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms