RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 SLC9C1Q4G0N8 1177 aa12.66□□□□□ -0.38
PRPF40B-204ENST00000527253 CERS3Q8IU89 383 aa12.66□□□□□ -0.38
PRPF40B-204ENST00000527253 TBC1D2Q9BYX2 928 aa12.66□□□□□ -0.38
PRPF40B-204ENST00000527253 EHD4Q9H223 541 aa12.66□□□□□ -0.38
PRPF40B-204ENST00000527253 GABRQQ9UN88 632 aa12.66□□□□□ -0.38
PRPF40B-204ENST00000527253 LOC285556D6RIA3 1793 aa12.66□□□□□ -0.38
PRPF40B-204ENST00000527253 PRKAB2O43741 272 aa12.65□□□□□ -0.38
PRPF40B-204ENST00000527253 GH2P01242 217 aa12.65□□□□□ -0.38
PRPF40B-204ENST00000527253 CYP2D6P10635 497 aa12.65□□□□□ -0.38
PRPF40B-204ENST00000527253 SHMT1P34896 483 aa12.65□□□□□ -0.38
PRPF40B-204ENST00000527253 ADD2P35612 726 aa12.65□□□□□ -0.38
PRPF40B-204ENST00000527253 PRMT2P55345 433 aa12.65□□□□□ -0.38
PRPF40B-204ENST00000527253 BACE1P56817 501 aa12.65□□□□□ -0.38
PRPF40B-204ENST00000527253 PRKCZQ05513 592 aa12.65□□□□□ -0.38
PRPF40B-204ENST00000527253 ANKRD13CQ8N6S4 541 aa12.65□□□□□ -0.38
PRPF40B-204ENST00000527253 SDR42E1Q8WUS8 393 aa12.65□□□□□ -0.38
PRPF40B-204ENST00000527253 TRIM34Q9BYJ4 488 aa12.65□□□□□ -0.38
PRPF40B-204ENST00000527253 ASCC2Q9H1I8 757 aaPredicted RBP12.65□□□□□ -0.38
PRPF40B-204ENST00000527253 ARMT1Q9H993 441 aa12.65□□□□□ -0.38
PRPF40B-204ENST00000527253 AS3MTQ9HBK9 375 aa12.65□□□□□ -0.38
PRPF40B-204ENST00000527253 SERPINB13Q9UIV8 391 aa12.65□□□□□ -0.38
PRPF40B-204ENST00000527253 DOCK3Q8IZD9 2030 aa12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 SMIM22K7EJ46 135 aa12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 PEX10O60683 326 aa12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 GUCY1A2P33402 732 aa12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 FCGRTP55899 365 aa12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 RRP1P56182 461 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 GABPAQ06546 454 aa12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 TSHZ3Q63HK5 1081 aa12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 POTEEQ6S8J3 1075 aa12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 TTC6Q86TZ1 520 aa12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 SMCR8Q8TEV9 937 aaPredicted RBP12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 P2RX7Q99572 595 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 CRNKL1Q9BZJ0 848 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 DCP1AQ9NPI6 582 aaPredicted RBP12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 EMILIN3Q9NT22 766 aa12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 GINM1Q9NU53 330 aa12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 DDX60LQ5H9U9 1706 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-204ENST00000527253 MYPNQ86TC9 1320 aa12.63□□□□□ -0.39
PRPF40B-204ENST00000527253 MGAMO43451 1857 aa12.63□□□□□ -0.39
PRPF40B-204ENST00000527253 USP17L10C9JJH3 530 aa12.63□□□□□ -0.39
PRPF40B-204ENST00000527253 MBD4O95243 580 aa12.63□□□□□ -0.39
PRPF40B-204ENST00000527253 POLR3DP05423 398 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-204ENST00000527253 HOXD10P28358 340 aa12.63□□□□□ -0.39
PRPF40B-204ENST00000527253 MTFR1Q15390 333 aa12.63□□□□□ -0.39
PRPF40B-204ENST00000527253 NBPF11Q86T75 865 aa12.63□□□□□ -0.39
PRPF40B-204ENST00000527253 ACER1Q8TDN7 264 aa12.63□□□□□ -0.39
PRPF40B-204ENST00000527253 YTHDC1Q96MU7 727 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-204ENST00000527253 ECHDC1Q9NTX5 307 aa12.63□□□□□ -0.39
PRPF40B-204ENST00000527253 MCM9Q9NXL9 1143 aa12.63□□□□□ -0.39
PRPF40B-204ENST00000527253 RBBP6Q7Z6E9 1792 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-204ENST00000527253 CENPFP49454 3210 aa12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 C19orf81C9J6K1 198 aa12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 HOXA7P31268 230 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 GRK4P32298 578 aa12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 UBE3CQ15386 1083 aa12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 FAM110CQ1W6H9 321 aa12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 ABCB5Q2M3G0 1257 aa12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 CERKLQ49MI3 558 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 RAET1EQ8TD07 263 aa12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 OTUD7AQ8TE49 926 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 DYNLL2Q96FJ2 89 aa12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 CRBNQ96SW2 442 aa12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 TMEM106CQ9BVX2 250 aa12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 PUS7LQ9H0K6 701 aaKnown RBP12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 TXNRD2Q9NNW7 524 aa12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 TMOD4Q9NZQ9 345 aa12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 PNMA3Q9UL41 463 aa12.62□□□□□ -0.39
PRPF40B-204ENST00000527253 NAV1Q8NEY1 1877 aa12.61□□□□□ -0.39
PRPF40B-204ENST00000527253 CYP2D7A0A087X1C5 515 aa12.61□□□□□ -0.39
PRPF40B-204ENST00000527253 TNPO2O14787 897 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-204ENST00000527253 GCLCP48506 637 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-204ENST00000527253 FLT3LGP49771 235 aa12.61□□□□□ -0.39
PRPF40B-204ENST00000527253 SLC44A5Q8NCS7 719 aa12.61□□□□□ -0.39
PRPF40B-204ENST00000527253 RBPJLQ9UBG7 517 aa12.61□□□□□ -0.39
PRPF40B-204ENST00000527253 MORF4L1Q9UBU8 362 aa12.61□□□□□ -0.39
PRPF40B-204ENST00000527253 ELNP15502 786 aa12.6□□□□□ -0.39
PRPF40B-204ENST00000527253 PABPC4Q13310 644 aaKnown RBP eCLIP12.6□□□□□ -0.39
PRPF40B-204ENST00000527253 SEPT2Q15019 361 aa12.6□□□□□ -0.39
PRPF40B-204ENST00000527253 RAB3GAP1Q15042 981 aa12.6□□□□□ -0.39
PRPF40B-204ENST00000527253 ZYXQ15942 572 aaKnown RBP12.6□□□□□ -0.39
PRPF40B-204ENST00000527253 Q3C1V9 767 aa12.6□□□□□ -0.39
PRPF40B-204ENST00000527253 USP17L2Q6R6M4 530 aa12.6□□□□□ -0.39
PRPF40B-204ENST00000527253 C12orf42Q96LP6 360 aa12.6□□□□□ -0.39
PRPF40B-204ENST00000527253 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.6□□□□□ -0.39
PRPF40B-204ENST00000527253 GJD2Q9UKL4 321 aa12.6□□□□□ -0.39
PRPF40B-204ENST00000527253 BAZ2AQ9UIF9 1905 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-204ENST00000527253 A0A1W2PRG0 241 aa12.59□□□□□ -0.39
PRPF40B-204ENST00000527253 ADCY3O60266 1144 aa12.59□□□□□ -0.39
PRPF40B-204ENST00000527253 HERVK_113P62684 666 aa12.59□□□□□ -0.39
PRPF40B-204ENST00000527253 IRX3P78415 501 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-204ENST00000527253 IRF5Q13568 498 aa12.59□□□□□ -0.39
PRPF40B-204ENST00000527253 C12orf60Q5U649 245 aa12.59□□□□□ -0.39
PRPF40B-204ENST00000527253 SIAH1Q8IUQ4 282 aa12.59□□□□□ -0.39
PRPF40B-204ENST00000527253 SHISA4Q96DD7 197 aa12.59□□□□□ -0.39
PRPF40B-204ENST00000527253 STRBPQ96SI9 672 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-204ENST00000527253 KIAA1683Q9H0B3 1180 aa12.59□□□□□ -0.39
PRPF40B-204ENST00000527253 ATP8A2Q9NTI2 1148 aa12.59□□□□□ -0.39
PRPF40B-204ENST00000527253 MYH7P12883 1935 aa12.58□□□□□ -0.39
PRPF40B-204ENST00000527253 USP17L12C9JPN9 530 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms