RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 RBBP6Q7Z6E9 1792 aaKnown RBP21.87■■□□□ 1.09
TRIM3-205ENST00000527237 USP17L5A8MUK1 530 aa21.86■■□□□ 1.09
TRIM3-205ENST00000527237 M0R2C6 588 aa21.86■■□□□ 1.09
TRIM3-205ENST00000527237 ERC2O15083 957 aa21.86■■□□□ 1.09
TRIM3-205ENST00000527237 POLR3DP05423 398 aaPredicted RBP21.86■■□□□ 1.09
TRIM3-205ENST00000527237 SHMT1P34896 483 aa21.86■■□□□ 1.09
TRIM3-205ENST00000527237 SP3Q02447 781 aa21.86■■□□□ 1.09
TRIM3-205ENST00000527237 TREML2Q5T2D2 321 aa21.86■■□□□ 1.09
TRIM3-205ENST00000527237 TTC6Q86TZ1 520 aa21.86■■□□□ 1.09
TRIM3-205ENST00000527237 SLC44A5Q8NCS7 719 aa21.86■■□□□ 1.09
TRIM3-205ENST00000527237 OSBP2Q969R2 916 aa21.86■■□□□ 1.09
TRIM3-205ENST00000527237 TLR2O60603 784 aa21.85■■□□□ 1.09
TRIM3-205ENST00000527237 ECM2O94769 699 aaPredicted RBP21.85■■□□□ 1.09
TRIM3-205ENST00000527237 CYP2C8P10632 490 aa21.85■■□□□ 1.09
TRIM3-205ENST00000527237 GABPAQ06546 454 aa21.85■■□□□ 1.09
TRIM3-205ENST00000527237 TATDN1Q6P1N9 297 aa21.85■■□□□ 1.09
TRIM3-205ENST00000527237 ZNF280CQ8ND82 737 aa21.85■■□□□ 1.09
TRIM3-205ENST00000527237 APPBP2Q92624 585 aa21.85■■□□□ 1.09
TRIM3-205ENST00000527237 RWDD1Q9H446 243 aaPredicted RBP21.85■■□□□ 1.09
TRIM3-205ENST00000527237 ZBTB47Q9UFB7 747 aaPredicted RBP21.85■■□□□ 1.09
TRIM3-205ENST00000527237 CPA4Q9UI42 421 aa21.85■■□□□ 1.09
TRIM3-205ENST00000527237 RNF113AO15541 343 aaKnown RBP21.84■■□□□ 1.09
TRIM3-205ENST00000527237 GH2P01242 217 aa21.84■■□□□ 1.09
TRIM3-205ENST00000527237 ASNSP08243 561 aa21.84■■□□□ 1.09
TRIM3-205ENST00000527237 PDE1AP54750 535 aa21.84■■□□□ 1.09
TRIM3-205ENST00000527237 HMGCS2P54868 508 aa21.84■■□□□ 1.09
TRIM3-205ENST00000527237 OTOP1Q7RTM1 612 aa21.84■■□□□ 1.09
TRIM3-205ENST00000527237 DYNLL2Q96FJ2 89 aa21.84■■□□□ 1.09
TRIM3-205ENST00000527237 ERO1AQ96HE7 468 aa21.84■■□□□ 1.09
TRIM3-205ENST00000527237 SEC62Q99442 399 aaKnown RBP21.84■■□□□ 1.09
TRIM3-205ENST00000527237 FSD1Q9BTV5 496 aa21.84■■□□□ 1.09
TRIM3-205ENST00000527237 ARHGAP39Q9C0H5 1083 aa21.84■■□□□ 1.09
TRIM3-205ENST00000527237 TRIM17Q9Y577 477 aa21.84■■□□□ 1.09
TRIM3-205ENST00000527237 SLC4A4Q9Y6R1 1079 aa21.84■■□□□ 1.09
TRIM3-205ENST00000527237 RLFQ13129 1914 aa21.84■■□□□ 1.09
TRIM3-205ENST00000527237 PLXNB2O15031 1838 aa21.83■■□□□ 1.09
TRIM3-205ENST00000527237 CENPFP49454 3210 aa21.83■■□□□ 1.09
TRIM3-205ENST00000527237 MTMR2Q13614 643 aa21.83■■□□□ 1.09
TRIM3-205ENST00000527237 FASTKD5Q7L8L6 764 aaKnown RBP21.83■■□□□ 1.09
TRIM3-205ENST00000527237 ATP8A2Q9NTI2 1148 aa21.83■■□□□ 1.09
TRIM3-205ENST00000527237 STAP2Q9UGK3 403 aa21.83■■□□□ 1.09
TRIM3-205ENST00000527237 CCDC85CA6NKD9 419 aa21.82■■□□□ 1.08
TRIM3-205ENST00000527237 C17orf99Q6UX52 265 aa21.82■■□□□ 1.08
TRIM3-205ENST00000527237 STRBPQ96SI9 672 aaKnown RBP21.82■■□□□ 1.08
TRIM3-205ENST00000527237 AS3MTQ9HBK9 375 aa21.82■■□□□ 1.08
TRIM3-205ENST00000527237 AGTPBP1Q9UPW5 1226 aa21.82■■□□□ 1.08
TRIM3-205ENST00000527237 COL11A1P12107 1806 aaPredicted RBP21.82■■□□□ 1.08
TRIM3-205ENST00000527237 LAMA4Q16363 1823 aa21.82■■□□□ 1.08
TRIM3-205ENST00000527237 GPAA1O43292 621 aa21.81■■□□□ 1.08
TRIM3-205ENST00000527237 CTGFP29279 349 aa21.81■■□□□ 1.08
TRIM3-205ENST00000527237 CHD1LQ86WJ1 897 aa21.81■■□□□ 1.08
TRIM3-205ENST00000527237 PARK7Q99497 189 aaKnown RBP21.81■■□□□ 1.08
TRIM3-205ENST00000527237 WDR18Q9BV38 432 aa21.81■■□□□ 1.08
TRIM3-205ENST00000527237 TBC1D2Q9BYX2 928 aa21.81■■□□□ 1.08
TRIM3-205ENST00000527237 EPB41L4AQ9HCS5 686 aaPredicted RBP21.81■■□□□ 1.08
TRIM3-205ENST00000527237 HPS5Q9UPZ3 1129 aa21.81■■□□□ 1.08
TRIM3-205ENST00000527237 A0A0G2JMZ2 1700 aa21.8■■□□□ 1.08
TRIM3-205ENST00000527237 USP17L12C9JPN9 530 aa21.8■■□□□ 1.08
TRIM3-205ENST00000527237 USP17L21D6R901 530 aa21.8■■□□□ 1.08
TRIM3-205ENST00000527237 ZFYP08048 801 aaPredicted RBP21.8■■□□□ 1.08
TRIM3-205ENST00000527237 GUCY1A2P33402 732 aa21.8■■□□□ 1.08
TRIM3-205ENST00000527237 NUCB1Q02818 461 aa21.8■■□□□ 1.08
TRIM3-205ENST00000527237 ABCB5Q2M3G0 1257 aa21.8■■□□□ 1.08
TRIM3-205ENST00000527237 CERKLQ49MI3 558 aaPredicted RBP21.8■■□□□ 1.08
TRIM3-205ENST00000527237 SH3D19Q5HYK7 790 aa21.8■■□□□ 1.08
TRIM3-205ENST00000527237 FBXO46Q6PJ61 603 aaPredicted RBP21.8■■□□□ 1.08
TRIM3-205ENST00000527237 PROCA1Q8NCQ7 364 aaPredicted RBP21.8■■□□□ 1.08
TRIM3-205ENST00000527237 GSG1L2A8MUP6 293 aa21.79■■□□□ 1.08
TRIM3-205ENST00000527237 BCRP11274 1271 aa21.79■■□□□ 1.08
TRIM3-205ENST00000527237 BACE1P56817 501 aa21.79■■□□□ 1.08
TRIM3-205ENST00000527237 C12orf60Q5U649 245 aa21.79■■□□□ 1.08
TRIM3-205ENST00000527237 CLEC10AQ8IUN9 316 aa21.79■■□□□ 1.08
TRIM3-205ENST00000527237 LACTBP83111 547 aaPredicted RBP21.78■■□□□ 1.08
TRIM3-205ENST00000527237 RAB3GAP1Q15042 981 aa21.78■■□□□ 1.08
TRIM3-205ENST00000527237 ZYXQ15942 572 aaKnown RBP21.78■■□□□ 1.08
TRIM3-205ENST00000527237 PKN2Q16513 984 aaKnown RBP21.78■■□□□ 1.08
TRIM3-205ENST00000527237 ZMYM1Q5SVZ6 1142 aa21.78■■□□□ 1.08
TRIM3-205ENST00000527237 CTR9Q6PD62 1173 aa21.78■■□□□ 1.08
TRIM3-205ENST00000527237 CCDC129Q6ZRS4 1044 aa21.78■■□□□ 1.08
TRIM3-205ENST00000527237 EFCC1Q9HA90 598 aa21.78■■□□□ 1.08
TRIM3-205ENST00000527237 GINM1Q9NU53 330 aa21.78■■□□□ 1.08
TRIM3-205ENST00000527237 SLC45A1Q9Y2W3 748 aa21.78■■□□□ 1.08
TRIM3-205ENST00000527237 SEPT2Q15019 361 aa21.77■■□□□ 1.08
TRIM3-205ENST00000527237 PLEKHM2Q8IWE5 1019 aa21.77■■□□□ 1.08
TRIM3-205ENST00000527237 ACER1Q8TDN7 264 aa21.77■■□□□ 1.08
TRIM3-205ENST00000527237 USP17L10C9JJH3 530 aa21.76■■□□□ 1.07
TRIM3-205ENST00000527237 MPHOSPH10O00566 681 aaKnown RBP21.76■■□□□ 1.07
TRIM3-205ENST00000527237 PTPN22Q9Y2R2 807 aa21.76■■□□□ 1.07
TRIM3-205ENST00000527237 ROBO3Q96MS0 1386 aa21.75■■□□□ 1.07
TRIM3-205ENST00000527237 AKR1B1P15121 316 aa21.75■■□□□ 1.07
TRIM3-205ENST00000527237 CDK8P49336 464 aa21.75■■□□□ 1.07
TRIM3-205ENST00000527237 C16orf86Q6ZW13 317 aa21.75■■□□□ 1.07
TRIM3-205ENST00000527237 STK11IPQ8N1F8 1099 aa21.75■■□□□ 1.07
TRIM3-205ENST00000527237 SMCR8Q8TEV9 937 aaPredicted RBP21.75■■□□□ 1.07
TRIM3-205ENST00000527237 EVI5LQ96CN4 794 aa21.75■■□□□ 1.07
TRIM3-205ENST00000527237 DDRGK1Q96HY6 314 aa21.75■■□□□ 1.07
TRIM3-205ENST00000527237 FEZ1Q99689 392 aa21.75■■□□□ 1.07
TRIM3-205ENST00000527237 ASCC2Q9H1I8 757 aaPredicted RBP21.75■■□□□ 1.07
TRIM3-205ENST00000527237 EMILIN3Q9NT22 766 aa21.75■■□□□ 1.07
TRIM3-205ENST00000527237 ARPP21Q9UBL0 812 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms