RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 CALM1P0DP23 149 aa23.97■■□□□ 1.43
SMCO4-203ENST00000526869 CALM2P0DP24 149 aa23.97■■□□□ 1.43
SMCO4-203ENST00000526869 CALM3P0DP25 149 aa23.97■■□□□ 1.43
SMCO4-203ENST00000526869 RPS12P25398 132 aaKnown RBP23.97■■□□□ 1.43
SMCO4-203ENST00000526869 PLIN4Q96Q06 1357 aa23.96■■□□□ 1.43
SMCO4-203ENST00000526869 CCDC196A0A1B0GTZ2 297 aa23.96■■□□□ 1.43
SMCO4-203ENST00000526869 SPDYE2BA6NHP3 402 aa23.96■■□□□ 1.43
SMCO4-203ENST00000526869 DDAH1O94760 285 aa23.96■■□□□ 1.43
SMCO4-203ENST00000526869 SPDYE6P0CI01 402 aa23.96■■□□□ 1.43
SMCO4-203ENST00000526869 TFAP4Q01664 338 aa23.96■■□□□ 1.43
SMCO4-203ENST00000526869 NBR1Q14596 966 aa23.96■■□□□ 1.43
SMCO4-203ENST00000526869 SLC4A8Q2Y0W8 1093 aa23.96■■□□□ 1.43
SMCO4-203ENST00000526869 FAM47AQ5JRC9 791 aa23.96■■□□□ 1.43
SMCO4-203ENST00000526869 MICU3Q86XE3 530 aa23.96■■□□□ 1.43
SMCO4-203ENST00000526869 DGKHQ86XP1 1220 aa23.96■■□□□ 1.43
SMCO4-203ENST00000526869 ATP6V1DQ9Y5K8 247 aa23.96■■□□□ 1.43
SMCO4-203ENST00000526869 ATRNL1Q5VV63 1379 aa23.95■■□□□ 1.42
SMCO4-203ENST00000526869 GOLGA6L22H0YM25 854 aa23.95■■□□□ 1.42
SMCO4-203ENST00000526869 F13A1P00488 732 aa23.95■■□□□ 1.42
SMCO4-203ENST00000526869 NFIAQ12857 509 aa23.95■■□□□ 1.42
SMCO4-203ENST00000526869 DLGAP5Q15398 846 aa23.95■■□□□ 1.42
SMCO4-203ENST00000526869 CATIPQ7Z7H3 387 aa23.95■■□□□ 1.42
SMCO4-203ENST00000526869 NEDD1Q8NHV4 660 aa23.95■■□□□ 1.42
SMCO4-203ENST00000526869 FAM198AQ9UFP1 575 aa23.95■■□□□ 1.42
SMCO4-203ENST00000526869 SERPINB13Q9UIV8 391 aa23.95■■□□□ 1.42
SMCO4-203ENST00000526869 PCDHAC2Q9Y5I4 1007 aa23.95■■□□□ 1.42
SMCO4-203ENST00000526869 STK36Q9NRP7 1315 aa23.94■■□□□ 1.42
SMCO4-203ENST00000526869 TSPY3P0CV98 308 aa23.94■■□□□ 1.42
SMCO4-203ENST00000526869 TSPY8P0CW00 308 aa23.94■■□□□ 1.42
SMCO4-203ENST00000526869 RASSF7Q02833 373 aa23.94■■□□□ 1.42
SMCO4-203ENST00000526869 RTN1Q16799 776 aa23.94■■□□□ 1.42
SMCO4-203ENST00000526869 FKBP1CQ5VVH2 108 aa23.94■■□□□ 1.42
SMCO4-203ENST00000526869 SLC44A5Q8NCS7 719 aa23.94■■□□□ 1.42
SMCO4-203ENST00000526869 DDX11Q96FC9 970 aa23.94■■□□□ 1.42
SMCO4-203ENST00000526869 PRMT6Q96LA8 375 aaPredicted RBP23.94■■□□□ 1.42
SMCO4-203ENST00000526869 FHDC1Q9C0D6 1143 aaPredicted RBP23.94■■□□□ 1.42
SMCO4-203ENST00000526869 FAM217BQ9NTX9 383 aaPredicted RBP23.94■■□□□ 1.42
SMCO4-203ENST00000526869 TMOD2Q9NZR1 351 aa23.94■■□□□ 1.42
SMCO4-203ENST00000526869 FZD9O00144 591 aa23.93■■□□□ 1.42
SMCO4-203ENST00000526869 IFNAR1P17181 557 aa23.93■■□□□ 1.42
SMCO4-203ENST00000526869 CDC27P30260 824 aa23.93■■□□□ 1.42
SMCO4-203ENST00000526869 NTRK3Q16288 839 aa23.93■■□□□ 1.42
SMCO4-203ENST00000526869 RCSD1Q6JBY9 416 aa23.93■■□□□ 1.42
SMCO4-203ENST00000526869 ZBED3Q96IU2 234 aaPredicted RBP23.93■■□□□ 1.42
SMCO4-203ENST00000526869 VPS37CA5D8V6 355 aaPredicted RBP23.92■■□□□ 1.42
SMCO4-203ENST00000526869 FDPSP14324 419 aaKnown RBP23.92■■□□□ 1.42
SMCO4-203ENST00000526869 EIF6P56537 245 aaKnown RBP23.92■■□□□ 1.42
SMCO4-203ENST00000526869 RAB11FIP4Q86YS3 637 aa23.92■■□□□ 1.42
SMCO4-203ENST00000526869 FANCBQ8NB91 859 aa23.92■■□□□ 1.42
SMCO4-203ENST00000526869 MAP3K14Q99558 947 aa23.92■■□□□ 1.42
SMCO4-203ENST00000526869 MYL10Q9BUA6 226 aa23.92■■□□□ 1.42
SMCO4-203ENST00000526869 TDRD3Q9H7E2 651 aaKnown RBP23.92■■□□□ 1.42
SMCO4-203ENST00000526869 IL17RBQ9NRM6 502 aa23.92■■□□□ 1.42
SMCO4-203ENST00000526869 RBM28Q9NW13 759 aaKnown RBP23.92■■□□□ 1.42
SMCO4-203ENST00000526869 ORC3Q9UBD5 711 aaPredicted RBP23.92■■□□□ 1.42
SMCO4-203ENST00000526869 ZBTB12Q9Y330 459 aaPredicted RBP23.92■■□□□ 1.42
SMCO4-203ENST00000526869 SIPA1L1O43166 1804 aa23.91■■□□□ 1.42
SMCO4-203ENST00000526869 MYH8P13535 1937 aa23.91■■□□□ 1.42
SMCO4-203ENST00000526869 ADD1P35611 737 aaKnown RBP23.91■■□□□ 1.42
SMCO4-203ENST00000526869 NOVP48745 357 aa23.91■■□□□ 1.42
SMCO4-203ENST00000526869 ZNF280AP59817 542 aaPredicted RBP23.91■■□□□ 1.42
SMCO4-203ENST00000526869 TROAPQ12815 778 aa23.91■■□□□ 1.42
SMCO4-203ENST00000526869 SPDYE2Q495Y8 402 aa23.91■■□□□ 1.42
SMCO4-203ENST00000526869 DPF2Q92785 391 aa23.91■■□□□ 1.42
SMCO4-203ENST00000526869 PI4KBQ9UBF8 816 aa23.91■■□□□ 1.42
SMCO4-203ENST00000526869 DICER1Q9UPY3 1922 aaKnown RBP23.9■■□□□ 1.42
SMCO4-203ENST00000526869 RXRAP19793 462 aa23.9■■□□□ 1.42
SMCO4-203ENST00000526869 PRELPP51888 382 aa23.9■■□□□ 1.42
SMCO4-203ENST00000526869 METTL16Q86W50 562 aaKnown RBP23.9■■□□□ 1.42
SMCO4-203ENST00000526869 KAT14Q9H8E8 782 aa23.9■■□□□ 1.42
SMCO4-203ENST00000526869 ZNF70Q9UC06 446 aaPredicted RBP23.9■■□□□ 1.42
SMCO4-203ENST00000526869 H3BQV1 296 aa23.89■■□□□ 1.41
SMCO4-203ENST00000526869 NMT2O60551 498 aa23.89■■□□□ 1.41
SMCO4-203ENST00000526869 DTNBO60941 627 aa23.89■■□□□ 1.41
SMCO4-203ENST00000526869 FMNL1O95466 1100 aaPredicted RBP23.89■■□□□ 1.41
SMCO4-203ENST00000526869 CACNB3P54284 484 aa23.89■■□□□ 1.41
SMCO4-203ENST00000526869 IFFO2Q5TF58 517 aa23.89■■□□□ 1.41
SMCO4-203ENST00000526869 FOXD4L5Q5VV16 416 aaPredicted RBP23.89■■□□□ 1.41
SMCO4-203ENST00000526869 CDC37L1Q7L3B6 337 aa23.89■■□□□ 1.41
SMCO4-203ENST00000526869 FOXP4Q8IVH2 680 aaPredicted RBP23.89■■□□□ 1.41
SMCO4-203ENST00000526869 FOXD4L4Q8WXT5 416 aaPredicted RBP23.89■■□□□ 1.41
SMCO4-203ENST00000526869 CCDC17Q96LX7 622 aa23.89■■□□□ 1.41
SMCO4-203ENST00000526869 GREB1LQ9C091 1923 aaPredicted RBP23.88■■□□□ 1.41
SMCO4-203ENST00000526869 SHMT1P34896 483 aa23.88■■□□□ 1.41
SMCO4-203ENST00000526869 PPP4R3BQ5MIZ7 849 aa23.88■■□□□ 1.41
SMCO4-203ENST00000526869 ZFPM1Q8IX07 1006 aa23.88■■□□□ 1.41
SMCO4-203ENST00000526869 CCDC144CPQ8IYA2 1237 aa23.88■■□□□ 1.41
SMCO4-203ENST00000526869 NUP133Q8WUM0 1156 aa23.88■■□□□ 1.41
SMCO4-203ENST00000526869 WASF1Q92558 559 aa23.88■■□□□ 1.41
SMCO4-203ENST00000526869 LMNB1P20700 586 aa23.87■■□□□ 1.41
SMCO4-203ENST00000526869 SSRP1Q08945 709 aaKnown RBP23.87■■□□□ 1.41
SMCO4-203ENST00000526869 SH3BP5LQ7L8J4 393 aa23.87■■□□□ 1.41
SMCO4-203ENST00000526869 TRIM22Q8IYM9 498 aa23.87■■□□□ 1.41
SMCO4-203ENST00000526869 FAM151AQ8WW52 585 aa23.87■■□□□ 1.41
SMCO4-203ENST00000526869 ZSCAN16Q9H4T2 348 aaPredicted RBP23.87■■□□□ 1.41
SMCO4-203ENST00000526869 IGKV6D-41A0A0C4DH26 115 aa23.86■■□□□ 1.41
SMCO4-203ENST00000526869 DDTLA6NHG4 134 aaPredicted RBP23.86■■□□□ 1.41
SMCO4-203ENST00000526869 MYO1BO43795 1136 aa23.86■■□□□ 1.41
SMCO4-203ENST00000526869 KIF5BP33176 963 aa23.86■■□□□ 1.41
SMCO4-203ENST00000526869 TCP10Q12799 353 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms