RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 CADPSQ9ULU8 1353 aa6.97□□□□□ -1.29
CSDE1-211ENST00000525970 ENC1O14682 589 aa6.97□□□□□ -1.29
CSDE1-211ENST00000525970 PAGE1O75459 146 aa6.97□□□□□ -1.29
CSDE1-211ENST00000525970 CCDC85BQ15834 202 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-211ENST00000525970 SCARA3Q6AZY7 606 aa6.97□□□□□ -1.29
CSDE1-211ENST00000525970 FAM214BQ7L5A3 538 aa6.97□□□□□ -1.29
CSDE1-211ENST00000525970 HEXIM2Q96MH2 286 aaKnown RBP6.97□□□□□ -1.29
CSDE1-211ENST00000525970 ACBD3Q9H3P7 528 aa6.97□□□□□ -1.29
CSDE1-211ENST00000525970 DDX41Q9UJV9 622 aaKnown RBP6.97□□□□□ -1.29
CSDE1-211ENST00000525970 USP31Q70CQ4 1352 aa6.96□□□□□ -1.29
CSDE1-211ENST00000525970 CELA3AP09093 270 aa6.96□□□□□ -1.3
CSDE1-211ENST00000525970 ITIH2P19823 946 aa6.96□□□□□ -1.3
CSDE1-211ENST00000525970 RACK1P63244 317 aaKnown RBP6.96□□□□□ -1.3
CSDE1-211ENST00000525970 MEI1Q5TIA1 1274 aa6.96□□□□□ -1.3
CSDE1-211ENST00000525970 KSR1Q8IVT5 923 aa6.96□□□□□ -1.3
CSDE1-211ENST00000525970 BHLHE22Q8NFJ8 381 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-211ENST00000525970 ACSBG1Q96GR2 724 aa6.96□□□□□ -1.3
CSDE1-211ENST00000525970 SPATA32Q96LK8 384 aa6.96□□□□□ -1.3
CSDE1-211ENST00000525970 CCSER2Q9H7U1 834 aa6.96□□□□□ -1.3
CSDE1-211ENST00000525970 PRDM10Q9NQV6 1147 aa6.96□□□□□ -1.3
CSDE1-211ENST00000525970 FAM53CQ9NYF3 392 aa6.96□□□□□ -1.3
CSDE1-211ENST00000525970 PPP1R1BQ9UD71 204 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-211ENST00000525970 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-211ENST00000525970 FANCGO15287 622 aa6.95□□□□□ -1.3
CSDE1-211ENST00000525970 TRIM37O94972 964 aa6.95□□□□□ -1.3
CSDE1-211ENST00000525970 TNNI2P48788 182 aa6.95□□□□□ -1.3
CSDE1-211ENST00000525970 TAF1CQ15572 869 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-211ENST00000525970 SV2BQ7L1I2 683 aa6.95□□□□□ -1.3
CSDE1-211ENST00000525970 ANKRD24Q8TF21 1146 aa6.95□□□□□ -1.3
CSDE1-211ENST00000525970 ARMC5Q96C12 935 aa6.95□□□□□ -1.3
CSDE1-211ENST00000525970 SLC38A3Q99624 504 aa6.95□□□□□ -1.3
CSDE1-211ENST00000525970 TANGO6Q9C0B7 1094 aa6.95□□□□□ -1.3
CSDE1-211ENST00000525970 CAPN10Q9HC96 672 aa6.95□□□□□ -1.3
CSDE1-211ENST00000525970 HSP90B1P14625 803 aaKnown RBP6.94□□□□□ -1.3
CSDE1-211ENST00000525970 BMP6P22004 513 aa6.94□□□□□ -1.3
CSDE1-211ENST00000525970 CANXP27824 592 aaKnown RBP6.94□□□□□ -1.3
CSDE1-211ENST00000525970 NTF4P34130 210 aa6.94□□□□□ -1.3
CSDE1-211ENST00000525970 CLCN7P51798 805 aa6.94□□□□□ -1.3
CSDE1-211ENST00000525970 RING1Q06587 406 aa6.94□□□□□ -1.3
CSDE1-211ENST00000525970 LRRC14Q15048 493 aa6.94□□□□□ -1.3
CSDE1-211ENST00000525970 ZNF124Q15973 351 aa6.94□□□□□ -1.3
CSDE1-211ENST00000525970 PCNX4Q63HM2 1172 aa6.94□□□□□ -1.3
CSDE1-211ENST00000525970 DPH6Q7L8W6 267 aa6.94□□□□□ -1.3
CSDE1-211ENST00000525970 ZSWIM9Q86XI8 627 aa6.94□□□□□ -1.3
CSDE1-211ENST00000525970 SPACA3Q8IXA5 215 aa6.94□□□□□ -1.3
CSDE1-211ENST00000525970 KCT2Q8NC54 265 aa6.94□□□□□ -1.3
CSDE1-211ENST00000525970 GRIN3AQ8TCU5 1115 aa6.94□□□□□ -1.3
CSDE1-211ENST00000525970 SMARCA5O60264 1052 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-211ENST00000525970 HMGB1P09429 215 aaKnown RBP6.93□□□□□ -1.3
CSDE1-211ENST00000525970 LMNB1P20700 586 aa6.93□□□□□ -1.3
CSDE1-211ENST00000525970 IKZF1Q13422 519 aa6.93□□□□□ -1.3
CSDE1-211ENST00000525970 MAP3K11Q16584 847 aa6.93□□□□□ -1.3
CSDE1-211ENST00000525970 ZNF394Q53GI3 561 aa6.93□□□□□ -1.3
CSDE1-211ENST00000525970 PPM1JQ5JR12 505 aa6.93□□□□□ -1.3
CSDE1-211ENST00000525970 TTBK2Q6IQ55 1244 aa6.93□□□□□ -1.3
CSDE1-211ENST00000525970 LLGL2Q6P1M3 1020 aa6.93□□□□□ -1.3
CSDE1-211ENST00000525970 FAM84AQ96KN4 292 aa6.93□□□□□ -1.3
CSDE1-211ENST00000525970 PICK1Q9NRD5 415 aa6.93□□□□□ -1.3
CSDE1-211ENST00000525970 CYP8B1Q9UNU6 501 aa6.93□□□□□ -1.3
CSDE1-211ENST00000525970 GNAT3A8MTJ3 354 aa6.92□□□□□ -1.3
CSDE1-211ENST00000525970 ZP2Q05996 745 aa6.92□□□□□ -1.3
CSDE1-211ENST00000525970 NKPD1Q17RQ9 610 aa6.92□□□□□ -1.3
CSDE1-211ENST00000525970 MPRIPQ6WCQ1 1025 aa6.92□□□□□ -1.3
CSDE1-211ENST00000525970 ZNF654Q8IZM8 581 aa6.92□□□□□ -1.3
CSDE1-211ENST00000525970 LMCD1Q9NZU5 365 aa6.92□□□□□ -1.3
CSDE1-211ENST00000525970 MAPK8IP1Q9UQF2 711 aa6.92□□□□□ -1.3
CSDE1-211ENST00000525970 ST13P50502 369 aaKnown RBP6.91□□□□□ -1.3
CSDE1-211ENST00000525970 RBL2Q08999 1139 aa6.91□□□□□ -1.3
CSDE1-211ENST00000525970 MESP2Q0VG99 397 aa6.91□□□□□ -1.3
CSDE1-211ENST00000525970 KCNMB1Q16558 191 aa6.91□□□□□ -1.3
CSDE1-211ENST00000525970 KRTAP19-4Q3LI73 84 aa6.91□□□□□ -1.3
CSDE1-211ENST00000525970 ZBTB37Q5TC79 503 aa6.91□□□□□ -1.3
CSDE1-211ENST00000525970 RASIP1Q5U651 963 aa6.91□□□□□ -1.3
CSDE1-211ENST00000525970 GIMAP6Q6P9H5 292 aa6.91□□□□□ -1.3
CSDE1-211ENST00000525970 CDC37L1Q7L3B6 337 aa6.91□□□□□ -1.3
CSDE1-211ENST00000525970 FOXQ1Q9C009 403 aa6.91□□□□□ -1.3
CSDE1-211ENST00000525970 LNPKQ9C0E8 428 aa6.91□□□□□ -1.3
CSDE1-211ENST00000525970 PITPNM2Q9BZ72 1349 aa6.91□□□□□ -1.3
CSDE1-211ENST00000525970 LRRC10BA6NIK2 292 aa6.9□□□□□ -1.3
CSDE1-211ENST00000525970 LRIG2O94898 1065 aa6.9□□□□□ -1.3
CSDE1-211ENST00000525970 EOMESO95936 686 aa6.9□□□□□ -1.3
CSDE1-211ENST00000525970 ATP2B1P20020 1258 aa6.9□□□□□ -1.3
CSDE1-211ENST00000525970 AFMP43652 599 aa6.9□□□□□ -1.3
CSDE1-211ENST00000525970 GNL2Q13823 731 aaKnown RBP6.9□□□□□ -1.3
CSDE1-211ENST00000525970 FBLN7Q53RD9 439 aa6.9□□□□□ -1.3
CSDE1-211ENST00000525970 SPOCD1Q6ZMY3 1216 aa6.9□□□□□ -1.3
CSDE1-211ENST00000525970 HS2ST1Q7LGA3 356 aa6.9□□□□□ -1.3
CSDE1-211ENST00000525970 ERMP1Q7Z2K6 904 aa6.9□□□□□ -1.3
CSDE1-211ENST00000525970 USP48Q86UV5 1035 aa6.9□□□□□ -1.3
CSDE1-211ENST00000525970 DHX38Q92620 1227 aaKnown RBP6.9□□□□□ -1.3
CSDE1-211ENST00000525970 PRDM5Q9NQX1 630 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-211ENST00000525970 CTNND2Q9UQB3 1225 aa6.9□□□□□ -1.3
CSDE1-211ENST00000525970 PCDHGB7Q9Y5F8 929 aa6.9□□□□□ -1.3
CSDE1-211ENST00000525970 DCDC2CA8MYV0 355 aa6.89□□□□□ -1.31
CSDE1-211ENST00000525970 RLBP1P12271 317 aa6.89□□□□□ -1.31
CSDE1-211ENST00000525970 GJA8P48165 433 aa6.89□□□□□ -1.31
CSDE1-211ENST00000525970 C22orf34Q6ZV56 151 aa6.89□□□□□ -1.31
CSDE1-211ENST00000525970 ARMCX6Q7L4S7 300 aa6.89□□□□□ -1.31
CSDE1-211ENST00000525970 C12orf40Q86WS4 652 aa6.89□□□□□ -1.31
CSDE1-211ENST00000525970 ZNF507Q8TCN5 953 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms