RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 GOLGA6L7A0A1B0GV03 622 aa7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 PSDA5PKW4 1024 aaPredicted RBP7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 BUB1O43683 1085 aa7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 FMR1Q06787 632 aaKnown RBP eCLIP7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 KIF5AQ12840 1032 aa7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 CCDC40Q4G0X9 1142 aa7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 TYW1BQ6NUM6 668 aa7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 TBC1D10CQ8IV04 446 aa7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 ESR2Q92731 530 aa7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 SYMPKQ92797 1274 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 SIRT1Q96EB6 747 aa7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 DEPDC5O75140 1603 aa7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 CDK12Q9NYV4 1490 aaPredicted RBP7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 GOLGA8HP0CJ92 632 aa7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 NEFHP12036 1026 aa7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 PDE6AP16499 860 aa7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 IQCEQ6IPM2 695 aa7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 CC2D1AQ6P1N0 951 aaPredicted RBP7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 DZIP1Q86YF9 867 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 AFAP1L1Q8TED9 768 aa7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 NELFBQ8WX92 580 aa7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 SAP30BPQ9UHR5 308 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 RRP15Q9Y3B9 282 aaKnown RBP7.83□□□□□ -1.16
TGFBR3-207ENST00000525962 SPHKAPQ2M3C7 1700 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 CPSF1Q10570 1443 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 MYO1CO00159 1063 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 MPHOSPH10O00566 681 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 KRT2P35908 639 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 PDE6BP35913 854 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 USP8P40818 1118 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 AEBP2Q6ZN18 517 aaPredicted RBP7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 VSTM4Q8IW00 320 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 KLHL7Q8IXQ5 586 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 MLKLQ8NB16 471 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 CPVLQ9H3G5 476 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 EFCAB6Q5THR3 1501 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 ATP7BP35670 1465 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 CEP152O94986 1710 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 IVLP07476 585 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 HOXB7P09629 217 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 PHKG2P15735 406 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 GYG1P46976 350 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 ADAT2Q7Z6V5 191 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 DZIP3Q86Y13 1208 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 MARCH10Q8NA82 808 aaPredicted RBP7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 DYDC1Q8WWB3 177 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 DCAF5Q96JK2 942 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 CCDC43Q96MW1 224 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 MRPL44Q9H9J2 332 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 MCM9Q9NXL9 1143 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 TRIM49BA6NDI0 452 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 NDUFAB1O14561 156 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 CDC25BP30305 580 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 PLA2G4AP47712 749 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 PIP4K2BP78356 416 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 PTGDRQ13258 359 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 TTF1Q15361 905 aaPredicted RBP7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 RILPL1Q5EBL4 403 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 KANK3Q6NY19 840 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 CNGA4Q8IV77 575 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 CSGALNACT2Q8N6G5 542 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 IQUBQ8NA54 791 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 UHMK1Q8TAS1 419 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 KAT14Q9H8E8 782 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 PIH1D3Q9NQM4 214 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 EXOC1Q9NV70 894 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 ZNF446Q9NWS9 450 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 AATFQ9NY61 560 aaKnown RBP eCLIP7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 GDAQ9Y2T3 454 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 ZNF609O15014 1411 aa7.82□□□□□ -1.16
TGFBR3-207ENST00000525962 MROH7-TTC4A0A0A0MT08 1334 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 GOLGA6CA6NDK9 693 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 POTEB2H3BUK9 544 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 GOLGA6DP0CG33 693 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 C2orf54Q08AI8 447 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 CAVIN4Q5BKX8 364 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 TTC38Q5R3I4 469 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 IFNL3Q8IZI9 196 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 ZNF654Q8IZM8 581 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 ZNF444Q8N0Y2 327 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 OTUD6BQ8N6M0 293 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 PROCA1Q8NCQ7 364 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 FAM76AQ8TAV0 307 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 JAKMIP2Q96AA8 810 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 SCLT1Q96NL6 688 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 KRT23Q9C075 422 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 RNF41Q9H4P4 317 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 SEC31BQ9NQW1 1179 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 TCP11L1Q9NUJ3 509 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 POLR3EQ9NVU0 708 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 GOLGA6AQ9NYA3 693 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 ANKIB1Q9P2G1 1089 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 ASAP1Q9ULH1 1129 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 A0A1W2PQ27 194 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 A0A1W2PQ64 194 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 A0A1W2PQD8 194 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 PSMA7O14818 248 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 KRT86O43790 486 aa7.81□□□□□ -1.16
TGFBR3-207ENST00000525962 ATL3Q6DD88 541 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms