RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 RBM8AQ9Y5S9 174 aaKnown RBP7.77□□□□□ -1.17
CD44-214ENST00000525211 PHF20L1A8MW92 1017 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 UBE2Q2LH0YL09 131 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 USP2O75604 605 aaPredicted RBP7.76□□□□□ -1.17
CD44-214ENST00000525211 APPP05067 770 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 INPP5BP32019 993 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 SHMT1P34896 483 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 MMP14P50281 582 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 ALX1Q15699 326 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 C12orf60Q5U649 245 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 FKBP1CQ5VVH2 108 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 CDC37L1Q7L3B6 337 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 FAM83AQ86UY5 434 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 CLEC10AQ8IUN9 316 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 APOBEC3FQ8IUX4 373 aaKnown RBP7.76□□□□□ -1.17
CD44-214ENST00000525211 MAP4K1Q92918 833 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 CLMNQ96JQ2 1002 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 NOL10Q9BSC4 688 aaKnown RBP7.76□□□□□ -1.17
CD44-214ENST00000525211 NAV1Q8NEY1 1877 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 MYH1P12882 1939 aa7.76□□□□□ -1.17
CD44-214ENST00000525211 MINDY4BA8MYZ0 360 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 HIP1O00291 1037 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 MYO1BO43795 1136 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 IGSF3O75054 1194 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 PRDM1O75626 825 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 TOMM70O94826 608 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 CELF2O95319 508 aaKnown RBP7.75□□□□□ -1.17
CD44-214ENST00000525211 CYP21A2P08686 494 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 GUCY1A2P33402 732 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 GJA5P36382 358 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 MFAP1P55081 439 aaKnown RBP7.75□□□□□ -1.17
CD44-214ENST00000525211 MAP3K10Q02779 954 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 NECTIN1Q15223 517 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 SBK1Q52WX2 424 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 METTL16Q86W50 562 aaKnown RBP7.75□□□□□ -1.17
CD44-214ENST00000525211 SULF1Q8IWU6 871 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 ZSCAN29Q8IWY8 852 aaPredicted RBP7.75□□□□□ -1.17
CD44-214ENST00000525211 RBM46Q8TBY0 533 aaKnown RBP7.75□□□□□ -1.17
CD44-214ENST00000525211 SP7Q8TDD2 431 aaPredicted RBP7.75□□□□□ -1.17
CD44-214ENST00000525211 CSRNP1Q96S65 589 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 DSCC1Q9BVC3 393 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.75□□□□□ -1.17
CD44-214ENST00000525211 USP26Q9BXU7 913 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 ANO2Q9NQ90 1003 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 ATP8A2Q9NTI2 1148 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.75□□□□□ -1.17
CD44-214ENST00000525211 NEDD4P46934 1319 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 RAD50Q92878 1312 aa7.75□□□□□ -1.17
CD44-214ENST00000525211 SPDYE16A6NNV3 312 aaPredicted RBP7.74□□□□□ -1.17
CD44-214ENST00000525211 SLC27A2O14975 620 aa7.74□□□□□ -1.17
CD44-214ENST00000525211 GDF11O95390 407 aa7.74□□□□□ -1.17
CD44-214ENST00000525211 POLR3DP05423 398 aaPredicted RBP7.74□□□□□ -1.17
CD44-214ENST00000525211 CPA1P15085 419 aa7.74□□□□□ -1.17
CD44-214ENST00000525211 AKR1B1P15121 316 aa7.74□□□□□ -1.17
CD44-214ENST00000525211 TDO2P48775 406 aa7.74□□□□□ -1.17
CD44-214ENST00000525211 CDK8P49336 464 aa7.74□□□□□ -1.17
CD44-214ENST00000525211 PPARAQ07869 468 aa7.74□□□□□ -1.17
CD44-214ENST00000525211 DGKZQ13574 1117 aa7.74□□□□□ -1.17
CD44-214ENST00000525211 LRRFIP1Q32MZ4 808 aaKnown RBP7.74□□□□□ -1.17
CD44-214ENST00000525211 ADCK5Q3MIX3 580 aa7.74□□□□□ -1.17
CD44-214ENST00000525211 TMED8Q6PL24 325 aaPredicted RBP7.74□□□□□ -1.17
CD44-214ENST00000525211 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.74□□□□□ -1.17
CD44-214ENST00000525211 C16orf86Q6ZW13 317 aa7.74□□□□□ -1.17
CD44-214ENST00000525211 TICAM2Q86XR7 235 aa7.74□□□□□ -1.17
CD44-214ENST00000525211 ZKSCAN4Q969J2 545 aaPredicted RBP7.74□□□□□ -1.17
CD44-214ENST00000525211 NAPBQ9H115 298 aa7.74□□□□□ -1.17
CD44-214ENST00000525211 TMOD2Q9NZR1 351 aa7.74□□□□□ -1.17
CD44-214ENST00000525211 ZNF112Q9UJU3 913 aa7.74□□□□□ -1.17
CD44-214ENST00000525211 COL2A1P02458 1487 aaPredicted RBP7.74□□□□□ -1.17
CD44-214ENST00000525211 PAPPA2Q9BXP8 1791 aa7.74□□□□□ -1.17
CD44-214ENST00000525211 NMT2O60551 498 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 GNAT2P19087 354 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 RASA1P20936 1047 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 FAM47AQ5JRC9 791 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 CREB3L3Q68CJ9 461 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 GIMAP6Q6P9H5 292 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 CYB5R4Q7L1T6 521 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 RASGRP2Q7LDG7 609 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 SIAH1Q8IUQ4 282 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 SMC1BQ8NDV3 1235 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.73□□□□□ -1.17
CD44-214ENST00000525211 RUFY2Q8WXA3 655 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 KCNB2Q92953 911 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 KLRG1Q96E93 195 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 ZIC5Q96T25 663 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 BACH2Q9BYV9 841 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 SENP2Q9HC62 589 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 ANAPC4Q9UJX5 808 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 ANGEL1Q9UNK9 670 aaKnown RBP7.73□□□□□ -1.17
CD44-214ENST00000525211 SNX14Q9Y5W7 946 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 OTOFQ9HC10 1997 aa7.73□□□□□ -1.17
CD44-214ENST00000525211 ROBO3Q96MS0 1386 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 FGRP09769 529 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 TNNI2P48788 182 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 ANTXR2P58335 489 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 MAP3K9P80192 1104 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 TNFAIP1Q13829 316 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 VGLL4Q14135 290 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 KIAA1755Q5JYT7 1200 aa7.72□□□□□ -1.17
CD44-214ENST00000525211 LDLRAD1Q5T700 205 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms